Cow genome map
Conread name: | Ss1.1-Thy1-THY010030C01.5 |
Conread position: | 193-468 |
Cow position: | chr12:10853298-10853564 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 190 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 113, 14 |
Conread position: | 194-670 |
Cow position: | chr12:39115430-39114961 (view UCSC Genome Browser custom track) |
Alignm length: | 489 |
Alignm identity: | 346 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 152 |
Conread position: | 199-669 |
Cow position: | chr12:5982631-5982140 (view UCSC Genome Browser custom track) |
Alignm length: | 502 |
Alignm identity: | 352 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 216 |
Conread position: | 200-518 |
Cow position: | chr12:23225857-23226162 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 230 |
Alignm E-value: | 4.99997e-41 |
Alignm gaps (pig, cow): | 19, 78 |
Conread position: | 201-656 |
Cow position: | chr12:15131485-15131955 (view UCSC Genome Browser custom track) |
Alignm length: | 477 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 17 |
Conread position: | 201-663 |
Cow position: | chr12:9014328-9013899 (view UCSC Genome Browser custom track) |
Alignm length: | 465 |
Alignm identity: | 320 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 102 |
Conread position: | 201-666 |
Cow position: | chr12:34598146-34597700 (view UCSC Genome Browser custom track) |
Alignm length: | 468 |
Alignm identity: | 316 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 105, 10 |
Conread position: | 201-671 |
Cow position: | chr12:35638504-35638954 (view UCSC Genome Browser custom track) |
Alignm length: | 475 |
Alignm identity: | 326 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 9 |
Conread position: | 202-663 |
Cow position: | chr12:39177907-39177476 (view UCSC Genome Browser custom track) |
Alignm length: | 464 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 43 |
Conread position: | 204-663 |
Cow position: | chr12:36251264-36251701 (view UCSC Genome Browser custom track) |
Alignm length: | 466 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 36 |
Conread position: | 204-672 |
Cow position: | chr12:20225308-20225748 (view UCSC Genome Browser custom track) |
Alignm length: | 471 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 95, 77 |
Conread position: | 205-534 |
Cow position: | chr12:32339036-32339367 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 229 |
Alignm E-value: | 5e-31 |
Alignm gaps (pig, cow): | 10, 127 |
Conread position: | 205-670 |
Cow position: | chr12:26292932-26292475 (view UCSC Genome Browser custom track) |
Alignm length: | 467 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 101, 13 |
Conread position: | 207-570 |
Cow position: | chr12:27133195-27133558 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 114 |
Conread position: | 207-613 |
Cow position: | chr12:5250900-5251286 (view UCSC Genome Browser custom track) |
Alignm length: | 412 |
Alignm identity: | 287 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 99, 139 |
Conread position: | 207-628 |
Cow position: | chr12:21677040-21676644 (view UCSC Genome Browser custom track) |
Alignm length: | 425 |
Alignm identity: | 294 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 8, 78 |
Conread position: | 207-666 |
Cow position: | chr12:21268238-21268690 (view UCSC Genome Browser custom track) |
Alignm length: | 467 |
Alignm identity: | 318 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 99, 138 |
Conread position: | 209-667 |
Cow position: | chr12:45704215-45703753 (view UCSC Genome Browser custom track) |
Alignm length: | 471 |
Alignm identity: | 345 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 26 |
Conread position: | 211-355 |
Cow position: | chr12:16352861-16352718 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 111 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 35, 25 |
Conread position: | 211-497 |
Cow position: | chr12:32865515-32865811 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 213 |
Alignm E-value: | 6e-33 |
Alignm gaps (pig, cow): | 95, 48 |
Conread position: | 211-524 |
Cow position: | chr12:17690930-17691237 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 228 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 120, 127 |
Conread position: | 211-656 |
Cow position: | chr12:30531523-30531958 (view UCSC Genome Browser custom track) |
Alignm length: | 451 |
Alignm identity: | 331 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 27 |
Conread position: | 211-660 |
Cow position: | chr12:36069538-36069079 (view UCSC Genome Browser custom track) |
Alignm length: | 469 |
Alignm identity: | 345 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 97, 117 |
Conread position: | 211-670 |
Cow position: | chr12:42786471-42786027 (view UCSC Genome Browser custom track) |
Alignm length: | 463 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 95, 128 |
Conread position: | 211-672 |
Cow position: | chr12:2004890-2005349 (view UCSC Genome Browser custom track) |
Alignm length: | 477 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 97, 115 |
Conread position: | 211-672 |
Cow position: | chr12:30232106-30231668 (view UCSC Genome Browser custom track) |
Alignm length: | 469 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 61 |
Conread position: | 211-672 |
Cow position: | chr12:42941283-42940838 (view UCSC Genome Browser custom track) |
Alignm length: | 466 |
Alignm identity: | 342 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 22 |
Conread position: | 211-683 |
Cow position: | chr12:15073142-15072678 (view UCSC Genome Browser custom track) |
Alignm length: | 481 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 97, 9 |
Conread position: | 212-670 |
Cow position: | chr12:8493795-8494246 (view UCSC Genome Browser custom track) |
Alignm length: | 472 |
Alignm identity: | 331 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 94, 24 |
Conread position: | 212-687 |
Cow position: | chr12:13634455-13634931 (view UCSC Genome Browser custom track) |
Alignm length: | 490 |
Alignm identity: | 360 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 96, 295 |
Conread position: | 213-674 |
Cow position: | chr12:8963379-8963812 (view UCSC Genome Browser custom track) |
Alignm length: | 463 |
Alignm identity: | 306 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 35, 23 |
Conread position: | 221-672 |
Cow position: | chr12:16082078-16081618 (view UCSC Genome Browser custom track) |
Alignm length: | 470 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 87, 18 |
Conread position: | 228-570 |
Cow position: | chr12:30446689-30446356 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 107 |
Conread position: | 234-681 |
Cow position: | chr12:6932014-6931558 (view UCSC Genome Browser custom track) |
Alignm length: | 471 |
Alignm identity: | 332 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 74, 93 |
Conread position: | 243-648 |
Cow position: | chr12:39937155-39937540 (view UCSC Genome Browser custom track) |
Alignm length: | 407 |
Alignm identity: | 274 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 100, 39 |
Conread position: | 244-672 |
Cow position: | chr12:34465432-34465015 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 280 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 84, 108 |
Conread position: | 245-567 |
Cow position: | chr12:9276740-9277048 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 232 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 63, 83 |
Conread position: | 245-660 |
Cow position: | chr12:16908999-16908580 (view UCSC Genome Browser custom track) |
Alignm length: | 435 |
Alignm identity: | 298 |
Alignm E-value: | 7.00649e-45 |
Alignm gaps (pig, cow): | 115, 61 |
Conread position: | 246-683 |
Cow position: | chr12:4146470-4146049 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 315 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 80 |
Conread position: | 272-668 |
Cow position: | chr12:31871253-31870859 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 55 |
Conread position: | 292-669 |
Cow position: | chr12:11212987-11213351 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 117, 17 |
Conread position: | 362-615 |
Cow position: | chr12:6689665-6689419 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 184 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 75, 19 |
Conread position: | 402-615 |
Cow position: | chr12:14958194-14958406 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 163 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 69, 75 |
Conread position: | 402-625 |
Cow position: | chr12:21667603-21667385 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 166 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 59, 67 |
Conread position: | 402-670 |
Cow position: | chr12:15365750-15365478 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 211 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 139, 78 |
Conread position: | 402-670 |
Cow position: | chr12:31608857-31608596 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 209 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 80, 0 |
Conread position: | 407-690 |
Cow position: | chr12:34395459-34395737 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 204 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 79, 135 |
Conread position: | 418-670 |
Cow position: | chr12:40548957-40549208 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 199 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 15 |
Conread position: | 424-671 |
Cow position: | chr12:39551765-39552009 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 196 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 80, 0 |
Conread position: | 431-681 |
Cow position: | chr12:41777827-41778069 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 182 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 443-680 |
Cow position: | chr12:16352493-16352254 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 182 |
Alignm E-value: | 9e-37 |
Alignm gaps (pig, cow): | 54, 37 |
Conread position: | 459-670 |
Cow position: | chr12:26174407-26174609 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 156 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 92, 25 |
Show alignments to all cow chromosomes.