Cow genome map
Conread name: | Ss1.1-Thy1-THY010030C01.5 |
Conread position: | 151-667 |
Cow position: | chr14:46583034-46582503 (view UCSC Genome Browser custom track) |
Alignm length: | 537 |
Alignm identity: | 366 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 199 |
Conread position: | 189-672 |
Cow position: | chr14:25151071-25151568 (view UCSC Genome Browser custom track) |
Alignm length: | 507 |
Alignm identity: | 379 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 29 |
Conread position: | 198-672 |
Cow position: | chr14:31380955-31380474 (view UCSC Genome Browser custom track) |
Alignm length: | 495 |
Alignm identity: | 357 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 40 |
Conread position: | 204-361 |
Cow position: | chr14:21776907-21776750 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 123 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 13, 137 |
Conread position: | 204-372 |
Cow position: | chr14:46952561-46952727 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 124 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 107, 16 |
Conread position: | 204-478 |
Cow position: | chr14:9580669-9580401 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 195 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 7, 102 |
Conread position: | 204-491 |
Cow position: | chr14:37769039-37768754 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 197 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 15, 103 |
Conread position: | 204-590 |
Cow position: | chr14:43220178-43219812 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 103 |
Conread position: | 204-614 |
Cow position: | chr14:37448307-37447918 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 287 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 102, 7 |
Conread position: | 204-660 |
Cow position: | chr14:45764107-45763642 (view UCSC Genome Browser custom track) |
Alignm length: | 472 |
Alignm identity: | 318 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 293 |
Conread position: | 204-668 |
Cow position: | chr14:3926149-3925680 (view UCSC Genome Browser custom track) |
Alignm length: | 478 |
Alignm identity: | 352 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 126 |
Conread position: | 205-322 |
Cow position: | chr14:28754917-28755034 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 94 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 101, 6 |
Conread position: | 206-523 |
Cow position: | chr14:42409230-42409562 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 47 |
Conread position: | 206-544 |
Cow position: | chr14:1454626-1454300 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 234 |
Alignm E-value: | 7e-34 |
Alignm gaps (pig, cow): | 12, 76 |
Conread position: | 207-660 |
Cow position: | chr14:48105259-48104809 (view UCSC Genome Browser custom track) |
Alignm length: | 468 |
Alignm identity: | 313 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 101, 68 |
Conread position: | 207-663 |
Cow position: | chr14:11672609-11672149 (view UCSC Genome Browser custom track) |
Alignm length: | 476 |
Alignm identity: | 351 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 99, 70 |
Conread position: | 207-668 |
Cow position: | chr14:32723630-32724076 (view UCSC Genome Browser custom track) |
Alignm length: | 465 |
Alignm identity: | 326 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 125, 91 |
Conread position: | 207-672 |
Cow position: | chr14:46556608-46556169 (view UCSC Genome Browser custom track) |
Alignm length: | 470 |
Alignm identity: | 325 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 75 |
Conread position: | 210-548 |
Cow position: | chr14:33436171-33436514 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 227 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 43, 127 |
Conread position: | 211-509 |
Cow position: | chr14:26186098-26186385 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 207 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 95, 115 |
Conread position: | 211-548 |
Cow position: | chr14:25502965-25503298 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 229 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 54, 88 |
Conread position: | 211-549 |
Cow position: | chr14:1208975-1208640 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 240 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 95, 195 |
Conread position: | 211-570 |
Cow position: | chr14:21875605-21875256 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 252 |
Alignm E-value: | 4.99983e-42 |
Alignm gaps (pig, cow): | 95, 128 |
Conread position: | 211-570 |
Cow position: | chr14:21998316-21998660 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 257 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 95, 109 |
Conread position: | 211-660 |
Cow position: | chr14:2326385-2326812 (view UCSC Genome Browser custom track) |
Alignm length: | 454 |
Alignm identity: | 316 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 25 |
Conread position: | 211-663 |
Cow position: | chr14:35172969-35172534 (view UCSC Genome Browser custom track) |
Alignm length: | 455 |
Alignm identity: | 318 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 95, 128 |
Conread position: | 211-669 |
Cow position: | chr14:46564489-46564956 (view UCSC Genome Browser custom track) |
Alignm length: | 475 |
Alignm identity: | 346 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 97, 117 |
Conread position: | 211-670 |
Cow position: | chr14:3168154-3168607 (view UCSC Genome Browser custom track) |
Alignm length: | 469 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 120 |
Conread position: | 211-670 |
Cow position: | chr14:25170866-25170413 (view UCSC Genome Browser custom track) |
Alignm length: | 462 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 97, 33 |
Conread position: | 211-670 |
Cow position: | chr14:32797523-32797976 (view UCSC Genome Browser custom track) |
Alignm length: | 465 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 97, 135 |
Conread position: | 211-670 |
Cow position: | chr14:44481550-44481095 (view UCSC Genome Browser custom track) |
Alignm length: | 478 |
Alignm identity: | 332 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 97, 135 |
Conread position: | 211-715 |
Cow position: | chr14:14779269-14778755 (view UCSC Genome Browser custom track) |
Alignm length: | 524 |
Alignm identity: | 369 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 79 |
Conread position: | 212-540 |
Cow position: | chr14:36358078-36357750 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 225 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 34, 118 |
Conread position: | 212-660 |
Cow position: | chr14:12299381-12299840 (view UCSC Genome Browser custom track) |
Alignm length: | 466 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 75 |
Conread position: | 212-663 |
Cow position: | chr14:25988358-25988818 (view UCSC Genome Browser custom track) |
Alignm length: | 467 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 96, 116 |
Conread position: | 213-660 |
Cow position: | chr14:45595306-45594861 (view UCSC Genome Browser custom track) |
Alignm length: | 463 |
Alignm identity: | 316 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 95, 200 |
Conread position: | 215-668 |
Cow position: | chr14:33595026-33595456 (view UCSC Genome Browser custom track) |
Alignm length: | 460 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 121, 51 |
Conread position: | 231-660 |
Cow position: | chr14:29712684-29712257 (view UCSC Genome Browser custom track) |
Alignm length: | 437 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 100 |
Conread position: | 259-546 |
Cow position: | chr14:3094560-3094835 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 204 |
Alignm E-value: | 6e-33 |
Alignm gaps (pig, cow): | 47, 11 |
Conread position: | 259-615 |
Cow position: | chr14:24385584-24385921 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 243 |
Alignm E-value: | 5e-31 |
Alignm gaps (pig, cow): | 21, 76 |
Conread position: | 260-468 |
Cow position: | chr14:26130720-26130517 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 147 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 48, 86 |
Conread position: | 297-658 |
Cow position: | chr14:36360800-36361131 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 243 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 11, 52 |
Conread position: | 362-660 |
Cow position: | chr14:35049299-35049590 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 215 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 7, 45 |
Conread position: | 374-556 |
Cow position: | chr14:46952787-46952961 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 143 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 399-537 |
Cow position: | chr14:10735479-10735615 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 105 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 78, 0 |
Conread position: | 402-649 |
Cow position: | chr14:23312978-23312741 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 179 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 405-653 |
Cow position: | chr14:12369356-12369599 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 190 |
Alignm E-value: | 7.00649e-44 |
Alignm gaps (pig, cow): | 187, 93 |
Conread position: | 412-648 |
Cow position: | chr14:39644111-39644334 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 174 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 412-660 |
Cow position: | chr14:46046300-46046057 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 183 |
Alignm E-value: | 4.99983e-42 |
Alignm gaps (pig, cow): | 68, 0 |
Conread position: | 424-671 |
Cow position: | chr14:1479875-1480120 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 184 |
Alignm E-value: | 9e-36 |
Alignm gaps (pig, cow): | 67, 84 |
Conread position: | 426-670 |
Cow position: | chr14:46398264-46398509 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 191 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 134, 53 |
Conread position: | 437-670 |
Cow position: | chr14:14643352-14643119 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 181 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 60, 45 |
Conread position: | 447-670 |
Cow position: | chr14:45572417-45572633 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 178 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 172, 35 |
Conread position: | 473-672 |
Cow position: | chr14:9768837-9769025 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 157 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 28, 0 |
Show alignments to all cow chromosomes.