Cow genome map

Conread name: Ss1.1-Thy1-THY010030C01.5

Conread position: 151-667
Cow position: chr14:46583034-46582503 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 199

Conread position: 189-672
Cow position: chr14:25151071-25151568 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 29

Conread position: 198-672
Cow position: chr14:31380955-31380474 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 40

Conread position: 204-361
Cow position: chr14:21776907-21776750 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 13, 137

Conread position: 204-372
Cow position: chr14:46952561-46952727 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 124
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 107, 16

Conread position: 204-478
Cow position: chr14:9580669-9580401 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 195
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 7, 102

Conread position: 204-491
Cow position: chr14:37769039-37768754 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 197
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 15, 103

Conread position: 204-590
Cow position: chr14:43220178-43219812 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 103

Conread position: 204-614
Cow position: chr14:37448307-37447918 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 7

Conread position: 204-660
Cow position: chr14:45764107-45763642 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 293

Conread position: 204-668
Cow position: chr14:3926149-3925680 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 126

Conread position: 205-322
Cow position: chr14:28754917-28755034 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 101, 6

Conread position: 206-523
Cow position: chr14:42409230-42409562 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 47

Conread position: 206-544
Cow position: chr14:1454626-1454300 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 234
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 12, 76

Conread position: 207-660
Cow position: chr14:48105259-48104809 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 313
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 101, 68

Conread position: 207-663
Cow position: chr14:11672609-11672149 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 70

Conread position: 207-668
Cow position: chr14:32723630-32724076 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 91

Conread position: 207-672
Cow position: chr14:46556608-46556169 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 75

Conread position: 210-548
Cow position: chr14:33436171-33436514 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 227
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 43, 127

Conread position: 211-509
Cow position: chr14:26186098-26186385 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 207
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 95, 115

Conread position: 211-548
Cow position: chr14:25502965-25503298 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 229
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 54, 88

Conread position: 211-549
Cow position: chr14:1208975-1208640 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 240
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 95, 195

Conread position: 211-570
Cow position: chr14:21875605-21875256 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 252
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 95, 128

Conread position: 211-570
Cow position: chr14:21998316-21998660 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 257
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 95, 109

Conread position: 211-660
Cow position: chr14:2326385-2326812 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 25

Conread position: 211-663
Cow position: chr14:35172969-35172534 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 128

Conread position: 211-669
Cow position: chr14:46564489-46564956 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 117

Conread position: 211-670
Cow position: chr14:3168154-3168607 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 120

Conread position: 211-670
Cow position: chr14:25170866-25170413 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 33

Conread position: 211-670
Cow position: chr14:32797523-32797976 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 135

Conread position: 211-670
Cow position: chr14:44481550-44481095 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 135

Conread position: 211-715
Cow position: chr14:14779269-14778755 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 79

Conread position: 212-540
Cow position: chr14:36358078-36357750 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 225
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 34, 118

Conread position: 212-660
Cow position: chr14:12299381-12299840 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 75

Conread position: 212-663
Cow position: chr14:25988358-25988818 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 116

Conread position: 213-660
Cow position: chr14:45595306-45594861 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 200

Conread position: 215-668
Cow position: chr14:33595026-33595456 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 51

Conread position: 231-660
Cow position: chr14:29712684-29712257 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 100

Conread position: 259-546
Cow position: chr14:3094560-3094835 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 204
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 47, 11

Conread position: 259-615
Cow position: chr14:24385584-24385921 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 243
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 21, 76

Conread position: 260-468
Cow position: chr14:26130720-26130517 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 147
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 48, 86

Conread position: 297-658
Cow position: chr14:36360800-36361131 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 243
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 11, 52

Conread position: 362-660
Cow position: chr14:35049299-35049590 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 215
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 7, 45

Conread position: 374-556
Cow position: chr14:46952787-46952961 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 143
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 33, 0

Conread position: 399-537
Cow position: chr14:10735479-10735615 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 78, 0

Conread position: 402-649
Cow position: chr14:23312978-23312741 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 179
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 33, 0

Conread position: 405-653
Cow position: chr14:12369356-12369599 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 190
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 187, 93

Conread position: 412-648
Cow position: chr14:39644111-39644334 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 174
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 44, 0

Conread position: 412-660
Cow position: chr14:46046300-46046057 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 183
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 68, 0

Conread position: 424-671
Cow position: chr14:1479875-1480120 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 184
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 67, 84

Conread position: 426-670
Cow position: chr14:46398264-46398509 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 53

Conread position: 437-670
Cow position: chr14:14643352-14643119 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 181
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 60, 45

Conread position: 447-670
Cow position: chr14:45572417-45572633 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 35

Conread position: 473-672
Cow position: chr14:9768837-9769025 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 157
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 28, 0

Show alignments to all cow chromosomes.