Cow genome map
| Conread name: | Ss1.1-Thy1-THY010030C01.5 |
| Conread position: | 186-613 |
| Cow position: | |
| Alignm length: | 433 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 44 |
| Conread position: | 195-663 |
| Cow position: | |
| Alignm length: | 476 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 145 |
| Conread position: | 196-361 |
| Cow position: | |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 22, 142 |
| Conread position: | 197-615 |
| Cow position: | |
| Alignm length: | 422 |
| Alignm identity: | 291 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 46, 14 |
| Conread position: | 198-451 |
| Cow position: | |
| Alignm length: | 258 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 108, 13 |
| Conread position: | 199-478 |
| Cow position: | |
| Alignm length: | 290 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 19, 141 |
| Conread position: | 199-679 |
| Cow position: | |
| Alignm length: | 485 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 149 |
| Conread position: | 200-569 |
| Cow position: | |
| Alignm length: | 373 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 63 |
| Conread position: | 201-311 |
| Cow position: | |
| Alignm length: | 112 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 201-614 |
| Cow position: | |
| Alignm length: | 430 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 37 |
| Conread position: | 201-615 |
| Cow position: | |
| Alignm length: | 422 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 10 |
| Conread position: | 204-370 |
| Cow position: | |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 120, 101 |
| Conread position: | 204-472 |
| Cow position: | |
| Alignm length: | 274 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 102, 144 |
| Conread position: | 204-473 |
| Cow position: | |
| Alignm length: | 273 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 102, 135 |
| Conread position: | 204-490 |
| Cow position: | |
| Alignm length: | 290 |
| Alignm identity: | 199 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 103, 7 |
| Conread position: | 204-660 |
| Cow position: | |
| Alignm length: | 481 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 32 |
| Conread position: | 204-663 |
| Cow position: | |
| Alignm length: | 464 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 40 |
| Conread position: | 204-663 |
| Cow position: | |
| Alignm length: | 467 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 134 |
| Conread position: | 204-668 |
| Cow position: | |
| Alignm length: | 484 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 14 |
| Conread position: | 204-670 |
| Cow position: | |
| Alignm length: | 487 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 7 |
| Conread position: | 204-672 |
| Cow position: | |
| Alignm length: | 485 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 55 |
| Conread position: | 204-678 |
| Cow position: | |
| Alignm length: | 479 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 116 |
| Conread position: | 204-683 |
| Cow position: | |
| Alignm length: | 491 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 34 |
| Conread position: | 204-691 |
| Cow position: | |
| Alignm length: | 510 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 38 |
| Conread position: | 205-508 |
| Cow position: | |
| Alignm length: | 310 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 13, 144 |
| Conread position: | 206-523 |
| Cow position: | |
| Alignm length: | 322 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 12, 73 |
| Conread position: | 206-663 |
| Cow position: | |
| Alignm length: | 460 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 129 |
| Conread position: | 206-668 |
| Cow position: | |
| Alignm length: | 479 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 126 |
| Conread position: | 207-340 |
| Cow position: | |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 99, 110 |
| Conread position: | 207-663 |
| Cow position: | |
| Alignm length: | 461 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 29 |
| Conread position: | 207-663 |
| Cow position: | |
| Alignm length: | 461 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 113 |
| Conread position: | 207-668 |
| Cow position: | |
| Alignm length: | 478 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 124 |
| Conread position: | 208-478 |
| Cow position: | |
| Alignm length: | 275 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 36, 122 |
| Conread position: | 208-668 |
| Cow position: | |
| Alignm length: | 478 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 36 |
| Conread position: | 209-670 |
| Cow position: | |
| Alignm length: | 463 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 81 |
| Conread position: | 209-672 |
| Cow position: | |
| Alignm length: | 477 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 118 |
| Conread position: | 211-312 |
| Cow position: | |
| Alignm length: | 103 |
| Alignm identity: | 87 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 211-470 |
| Cow position: | |
| Alignm length: | 274 |
| Alignm identity: | 199 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 96, 110 |
| Conread position: | 211-479 |
| Cow position: | |
| Alignm length: | 276 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 166, 44 |
| Conread position: | 211-518 |
| Cow position: | |
| Alignm length: | 316 |
| Alignm identity: | 222 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 97, 198 |
| Conread position: | 211-522 |
| Cow position: | |
| Alignm length: | 321 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 50, 114 |
| Conread position: | 211-567 |
| Cow position: | |
| Alignm length: | 359 |
| Alignm identity: | 246 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 95, 42 |
| Conread position: | 211-615 |
| Cow position: | |
| Alignm length: | 422 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 124 |
| Conread position: | 211-660 |
| Cow position: | |
| Alignm length: | 466 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 80 |
| Conread position: | 211-663 |
| Cow position: | |
| Alignm length: | 457 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 99 |
| Conread position: | 211-663 |
| Cow position: | |
| Alignm length: | 456 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 128 |
| Conread position: | 211-666 |
| Cow position: | |
| Alignm length: | 458 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 97 |
| Conread position: | 211-668 |
| Cow position: | |
| Alignm length: | 462 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 14 |
| Conread position: | 211-668 |
| Cow position: | |
| Alignm length: | 460 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 25 |
| Conread position: | 211-668 |
| Cow position: | |
| Alignm length: | 460 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 10 |
| Conread position: | 211-670 |
| Cow position: | |
| Alignm length: | 478 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 21 |
| Conread position: | 211-672 |
| Cow position: | |
| Alignm length: | 464 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 60 |
| Conread position: | 211-672 |
| Cow position: | |
| Alignm length: | 470 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 122 |
| Conread position: | 211-672 |
| Cow position: | |
| Alignm length: | 483 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 268 |
| Conread position: | 211-672 |
| Cow position: | |
| Alignm length: | 464 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 136 |
| Conread position: | 211-672 |
| Cow position: | |
| Alignm length: | 463 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 41 |
| Conread position: | 212-663 |
| Cow position: | |
| Alignm length: | 477 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 8 |
| Conread position: | 212-672 |
| Cow position: | |
| Alignm length: | 463 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 85 |
| Conread position: | 214-555 |
| Cow position: | |
| Alignm length: | 345 |
| Alignm identity: | 248 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 94, 18 |
| Conread position: | 214-667 |
| Cow position: | |
| Alignm length: | 458 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 118 |
| Conread position: | 215-488 |
| Cow position: | |
| Alignm length: | 277 |
| Alignm identity: | 202 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 40, 113 |
| Conread position: | 215-594 |
| Cow position: | |
| Alignm length: | 381 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 131 |
| Conread position: | 216-602 |
| Cow position: | |
| Alignm length: | 393 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 9 |
| Conread position: | 240-670 |
| Cow position: | |
| Alignm length: | 433 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 99 |
| Conread position: | 243-648 |
| Cow position: | |
| Alignm length: | 406 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 245-539 |
| Cow position: | |
| Alignm length: | 302 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 19, 50 |
| Conread position: | 245-546 |
| Cow position: | |
| Alignm length: | 309 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 18, 87 |
| Conread position: | 247-668 |
| Cow position: | |
| Alignm length: | 437 |
| Alignm identity: | 293 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 59, 10 |
| Conread position: | 278-661 |
| Cow position: | |
| Alignm length: | 388 |
| Alignm identity: | 259 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 28, 68 |
| Conread position: | 292-540 |
| Cow position: | |
| Alignm length: | 255 |
| Alignm identity: | 173 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 19, 38 |
| Conread position: | 301-672 |
| Cow position: | |
| Alignm length: | 375 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 8 |
| Conread position: | 391-672 |
| Cow position: | |
| Alignm length: | 282 |
| Alignm identity: | 209 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 395-661 |
| Cow position: | |
| Alignm length: | 269 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 212, 26 |
| Conread position: | 396-672 |
| Cow position: | |
| Alignm length: | 278 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 205 |
| Conread position: | 402-660 |
| Cow position: | |
| Alignm length: | 259 |
| Alignm identity: | 191 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 402-670 |
| Cow position: | |
| Alignm length: | 269 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 409-663 |
| Cow position: | |
| Alignm length: | 255 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 409-663 |
| Cow position: | |
| Alignm length: | 256 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 231, 71 |
| Conread position: | 409-668 |
| Cow position: | |
| Alignm length: | 261 |
| Alignm identity: | 195 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 53, 40 |
| Conread position: | 413-662 |
| Cow position: | |
| Alignm length: | 250 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 413-663 |
| Cow position: | |
| Alignm length: | 253 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 178, 67 |
| Conread position: | 413-671 |
| Cow position: | |
| Alignm length: | 259 |
| Alignm identity: | 180 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 421-648 |
| Cow position: | |
| Alignm length: | 230 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 177, 85 |
| Conread position: | 424-670 |
| Cow position: | |
| Alignm length: | 248 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 15 |
| Conread position: | 424-671 |
| Cow position: | |
| Alignm length: | 248 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 424-671 |
| Cow position: | |
| Alignm length: | 248 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 424-672 |
| Cow position: | |
| Alignm length: | 249 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 446-613 |
| Cow position: | |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 460-670 |
| Cow position: | |
| Alignm length: | 211 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 464-672 |
| Cow position: | |
| Alignm length: | 209 |
| Alignm identity: | 169 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 467-615 |
| Cow position: | |
| Alignm length: | 149 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 467-657 |
| Cow position: | |
| Alignm length: | 191 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 476-607 |
| Cow position: | |
| Alignm length: | 133 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 115, 22 |
| Conread position: | 480-671 |
| Cow position: | |
| Alignm length: | 193 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 37, 32 |
| Conread position: | 503-670 |
| Cow position: | |
| Alignm length: | 168 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 529-668 |
| Cow position: | |
| Alignm length: | 140 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 543-675 |
| Cow position: | |
| Alignm length: | 133 |
| Alignm identity: | 101 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 80, 0 |
Show alignments to all cow chromosomes.