Cow genome map
| Conread name: | Ss1.1-Thy1-THY010030C01.5 |
| Conread position: | 201-663 |
| Cow position: | chr28:91395-91838 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 121 |
| Conread position: | 204-461 |
| Cow position: | chr28:25588231-25588500 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 102, 133 |
| Conread position: | 204-663 |
| Cow position: | chr28:513473-513911 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 134 |
| Conread position: | 206-661 |
| Cow position: | chr28:74176-74612 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 109 |
| Conread position: | 207-570 |
| Cow position: | chr28:4567899-4567542 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 260 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 8, 26 |
| Conread position: | 207-663 |
| Cow position: | chr28:80294-80731 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 109 |
| Conread position: | 207-678 |
| Cow position: | chr28:13771757-13771310 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 113 |
| Conread position: | 211-510 |
| Cow position: | chr28:88332-88042 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 95, 90 |
| Conread position: | 211-668 |
| Cow position: | chr28:7239302-7238852 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 131 |
| Conread position: | 211-689 |
| Cow position: | chr28:32648908-32649399 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 310 |
| Conread position: | 212-663 |
| Cow position: | chr28:28731104-28730671 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 109 |
| Conread position: | 212-667 |
| Cow position: | chr28:2370922-2370459 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 202 |
| Conread position: | 213-668 |
| Cow position: | chr28:22968845-22969301 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 133 |
| Conread position: | 213-691 |
| Cow position: | chr28:19106222-19105733 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 118 |
| Conread position: | 214-394 |
| Cow position: | chr28:9417319-9417496 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 149, 44 |
| Conread position: | 246-597 |
| Cow position: | chr28:23344248-23344594 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 41 |
| Conread position: | 277-599 |
| Cow position: | chr28:17529410-17529101 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 51 |
| Conread position: | 280-670 |
| Cow position: | chr28:30947138-30946744 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 269 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 28, 40 |
| Conread position: | 307-682 |
| Cow position: | chr28:29984592-29984944 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 264 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 58, 38 |
| Conread position: | 389-663 |
| Cow position: | chr28:4547486-4547761 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 208 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 214, 9 |
| Conread position: | 399-661 |
| Cow position: | chr28:23798818-23799062 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 36, 48 |
| Conread position: | 418-660 |
| Cow position: | chr28:5340987-5341228 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 16 |
| Conread position: | 421-606 |
| Cow position: | chr28:9417495-9417678 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 153 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 424-613 |
| Cow position: | chr28:34736387-34736195 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 67, 84 |
| Conread position: | 460-668 |
| Cow position: | chr28:4130158-4129954 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 165 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 166, 22 |
| Conread position: | 460-680 |
| Cow position: | chr28:25590698-25590925 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 89, 22 |
Show alignments to all cow chromosomes.