Cow genome map
Conread name: | Ss1.1-Thy1-THY010030C01.5 |
Conread position: | 190-660 |
Cow position: | chr29:44693023-44693471 (view UCSC Genome Browser custom track) |
Alignm length: | 473 |
Alignm identity: | 309 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 139, 11 |
Conread position: | 191-668 |
Cow position: | chr29:28847486-28846996 (view UCSC Genome Browser custom track) |
Alignm length: | 499 |
Alignm identity: | 354 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 11 |
Conread position: | 196-361 |
Cow position: | chr29:14499536-14499373 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 131 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 22, 125 |
Conread position: | 196-663 |
Cow position: | chr29:17212027-17212453 (view UCSC Genome Browser custom track) |
Alignm length: | 471 |
Alignm identity: | 317 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 110, 125 |
Conread position: | 200-361 |
Cow position: | chr29:32150234-32150397 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 116 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 116, 0 |
Conread position: | 204-318 |
Cow position: | chr29:22526214-22526331 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 95 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 204-502 |
Cow position: | chr29:20705977-20706261 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 217 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 204, 60 |
Conread position: | 204-544 |
Cow position: | chr29:26898162-26897842 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 254 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 10, 120 |
Conread position: | 204-663 |
Cow position: | chr29:5624294-5624765 (view UCSC Genome Browser custom track) |
Alignm length: | 478 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 102, 183 |
Conread position: | 205-668 |
Cow position: | chr29:26596613-26597069 (view UCSC Genome Browser custom track) |
Alignm length: | 469 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 108, 13 |
Conread position: | 206-468 |
Cow position: | chr29:16478662-16478385 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 206 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 100, 134 |
Conread position: | 207-347 |
Cow position: | chr29:36571442-36571299 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 109 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 207-611 |
Cow position: | chr29:40587690-40588070 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 276 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 99, 31 |
Conread position: | 209-657 |
Cow position: | chr29:31209956-31210387 (view UCSC Genome Browser custom track) |
Alignm length: | 455 |
Alignm identity: | 310 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 99, 55 |
Conread position: | 211-370 |
Cow position: | chr29:31235934-31236092 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 125 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 95, 9 |
Conread position: | 211-623 |
Cow position: | chr29:32104044-32104437 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 290 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 95, 110 |
Conread position: | 211-653 |
Cow position: | chr29:5523032-5523467 (view UCSC Genome Browser custom track) |
Alignm length: | 456 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 151, 52 |
Conread position: | 211-659 |
Cow position: | chr29:33434847-33435311 (view UCSC Genome Browser custom track) |
Alignm length: | 468 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 97, 81 |
Conread position: | 211-663 |
Cow position: | chr29:36638502-36638942 (view UCSC Genome Browser custom track) |
Alignm length: | 455 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 122, 95 |
Conread position: | 211-668 |
Cow position: | chr29:11450151-11449697 (view UCSC Genome Browser custom track) |
Alignm length: | 463 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 71 |
Conread position: | 211-670 |
Cow position: | chr29:30723214-30723670 (view UCSC Genome Browser custom track) |
Alignm length: | 474 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 97, 135 |
Conread position: | 211-672 |
Cow position: | chr29:18183326-18182872 (view UCSC Genome Browser custom track) |
Alignm length: | 469 |
Alignm identity: | 366 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 97, 47 |
Conread position: | 211-672 |
Cow position: | chr29:30715203-30714764 (view UCSC Genome Browser custom track) |
Alignm length: | 468 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 98, 140 |
Conread position: | 211-680 |
Cow position: | chr29:28794459-28794940 (view UCSC Genome Browser custom track) |
Alignm length: | 487 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 95, 42 |
Conread position: | 213-534 |
Cow position: | chr29:40098047-40098365 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 223 |
Alignm E-value: | 5e-32 |
Alignm gaps (pig, cow): | 33, 84 |
Conread position: | 213-681 |
Cow position: | chr29:43994000-43994456 (view UCSC Genome Browser custom track) |
Alignm length: | 473 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 93, 109 |
Conread position: | 218-650 |
Cow position: | chr29:30651803-30651388 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 300 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 46, 122 |
Conread position: | 220-670 |
Cow position: | chr29:12897473-12897028 (view UCSC Genome Browser custom track) |
Alignm length: | 457 |
Alignm identity: | 332 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 90 |
Conread position: | 221-663 |
Cow position: | chr29:8941048-8940616 (view UCSC Genome Browser custom track) |
Alignm length: | 446 |
Alignm identity: | 323 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 87, 119 |
Conread position: | 225-672 |
Cow position: | chr29:17102244-17102674 (view UCSC Genome Browser custom track) |
Alignm length: | 464 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 18 |
Conread position: | 233-661 |
Cow position: | chr29:420526-420932 (view UCSC Genome Browser custom track) |
Alignm length: | 431 |
Alignm identity: | 287 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 73, 65 |
Conread position: | 236-663 |
Cow position: | chr29:36570849-36571245 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 86 |
Conread position: | 250-572 |
Cow position: | chr29:41496822-41497130 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 233 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 58, 72 |
Conread position: | 278-663 |
Cow position: | chr29:38051393-38051018 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 260 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 30, 60 |
Conread position: | 355-668 |
Cow position: | chr29:30691296-30690985 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 210 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 37, 49 |
Conread position: | 362-660 |
Cow position: | chr29:15852389-15852674 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 211 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 362-668 |
Cow position: | chr29:6389715-6390019 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 226 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 6, 120 |
Conread position: | 374-615 |
Cow position: | chr29:31236300-31236540 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 188 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 125, 9 |
Conread position: | 399-614 |
Cow position: | chr29:28329648-28329856 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 155 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 98, 0 |
Conread position: | 402-611 |
Cow position: | chr29:44130740-44130946 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 159 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 96, 0 |
Conread position: | 402-668 |
Cow position: | chr29:42198819-42198553 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 199 |
Alignm E-value: | 4.99983e-42 |
Alignm gaps (pig, cow): | 35, 84 |
Conread position: | 403-666 |
Cow position: | chr29:34900344-34900600 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 190 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 136, 98 |
Conread position: | 413-661 |
Cow position: | chr29:32882291-32882055 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 175 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 67, 0 |
Conread position: | 427-657 |
Cow position: | chr29:31218552-31218773 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 178 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 75, 0 |
Conread position: | 444-657 |
Cow position: | chr29:1822101-1821897 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 155 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 15, 64 |
Conread position: | 456-671 |
Cow position: | chr29:32844735-32844523 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 171 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 7, 51 |
Conread position: | 463-671 |
Cow position: | chr29:16897689-16897468 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 163 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 80, 49 |
Conread position: | 469-670 |
Cow position: | chr29:20706483-20706677 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 161 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 74, 7 |
Show alignments to all cow chromosomes.