Cow genome map

Conread name: Ss1.1-Thy1-THY010030C01.5

Conread position: 190-660
Cow position: chr29:44693023-44693471 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 309
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 139, 11

Conread position: 191-668
Cow position: chr29:28847486-28846996 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 11

Conread position: 196-361
Cow position: chr29:14499536-14499373 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 131
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 22, 125

Conread position: 196-663
Cow position: chr29:17212027-17212453 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 317
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 110, 125

Conread position: 200-361
Cow position: chr29:32150234-32150397 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 116
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 116, 0

Conread position: 204-318
Cow position: chr29:22526214-22526331 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 204-502
Cow position: chr29:20705977-20706261 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 217
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 204, 60

Conread position: 204-544
Cow position: chr29:26898162-26897842 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 254
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 10, 120

Conread position: 204-663
Cow position: chr29:5624294-5624765 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 183

Conread position: 205-668
Cow position: chr29:26596613-26597069 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 13

Conread position: 206-468
Cow position: chr29:16478662-16478385 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 206
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 100, 134

Conread position: 207-347
Cow position: chr29:36571442-36571299 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 207-611
Cow position: chr29:40587690-40588070 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 276
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 99, 31

Conread position: 209-657
Cow position: chr29:31209956-31210387 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 55

Conread position: 211-370
Cow position: chr29:31235934-31236092 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 125
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 95, 9

Conread position: 211-623
Cow position: chr29:32104044-32104437 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 290
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 95, 110

Conread position: 211-653
Cow position: chr29:5523032-5523467 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 52

Conread position: 211-659
Cow position: chr29:33434847-33435311 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 81

Conread position: 211-663
Cow position: chr29:36638502-36638942 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 95

Conread position: 211-668
Cow position: chr29:11450151-11449697 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 71

Conread position: 211-670
Cow position: chr29:30723214-30723670 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 135

Conread position: 211-672
Cow position: chr29:18183326-18182872 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 47

Conread position: 211-672
Cow position: chr29:30715203-30714764 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 140

Conread position: 211-680
Cow position: chr29:28794459-28794940 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 42

Conread position: 213-534
Cow position: chr29:40098047-40098365 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 223
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 33, 84

Conread position: 213-681
Cow position: chr29:43994000-43994456 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 109

Conread position: 218-650
Cow position: chr29:30651803-30651388 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 300
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 46, 122

Conread position: 220-670
Cow position: chr29:12897473-12897028 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 90

Conread position: 221-663
Cow position: chr29:8941048-8940616 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 119

Conread position: 225-672
Cow position: chr29:17102244-17102674 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 18

Conread position: 233-661
Cow position: chr29:420526-420932 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 287
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 73, 65

Conread position: 236-663
Cow position: chr29:36570849-36571245 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 86

Conread position: 250-572
Cow position: chr29:41496822-41497130 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 233
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 58, 72

Conread position: 278-663
Cow position: chr29:38051393-38051018 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 260
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 30, 60

Conread position: 355-668
Cow position: chr29:30691296-30690985 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 210
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 37, 49

Conread position: 362-660
Cow position: chr29:15852389-15852674 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 211
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 44, 0

Conread position: 362-668
Cow position: chr29:6389715-6390019 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 120

Conread position: 374-615
Cow position: chr29:31236300-31236540 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 9

Conread position: 399-614
Cow position: chr29:28329648-28329856 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 155
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 98, 0

Conread position: 402-611
Cow position: chr29:44130740-44130946 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 159
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 96, 0

Conread position: 402-668
Cow position: chr29:42198819-42198553 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 199
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 35, 84

Conread position: 403-666
Cow position: chr29:34900344-34900600 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 190
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 136, 98

Conread position: 413-661
Cow position: chr29:32882291-32882055 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 175
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 67, 0

Conread position: 427-657
Cow position: chr29:31218552-31218773 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 178
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 75, 0

Conread position: 444-657
Cow position: chr29:1822101-1821897 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 155
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 15, 64

Conread position: 456-671
Cow position: chr29:32844735-32844523 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 171
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 7, 51

Conread position: 463-671
Cow position: chr29:16897689-16897468 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 163
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 80, 49

Conread position: 469-670
Cow position: chr29:20706483-20706677 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 161
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 74, 7

Show alignments to all cow chromosomes.