Cow genome map
| Conread name: | Ss1.1-Thy1-THY010030C01.5 |
| Conread position: | 174-361 |
| Cow position: | chr3:42935801-42935988 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 12, 148 |
| Conread position: | 179-669 |
| Cow position: | chr3:85150262-85149779 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 82 |
| Conread position: | 181-397 |
| Cow position: | chr3:36843956-36844184 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 185-663 |
| Cow position: | chr3:35352354-35352806 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 17 |
| Conread position: | 190-681 |
| Cow position: | chr3:6190489-6190010 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 7 |
| Conread position: | 197-663 |
| Cow position: | chr3:77332703-77333149 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 47 |
| Conread position: | 198-569 |
| Cow position: | chr3:74711470-74711097 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 142 |
| Conread position: | 199-530 |
| Cow position: | chr3:33783943-33784266 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 223 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 6, 123 |
| Conread position: | 201-361 |
| Cow position: | chr3:22702441-22702600 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 57, 126 |
| Conread position: | 201-661 |
| Cow position: | chr3:22699312-22698885 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 318 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 105, 10 |
| Conread position: | 204-359 |
| Cow position: | chr3:3804048-3803893 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 15, 118 |
| Conread position: | 204-359 |
| Cow position: | chr3:6050032-6049879 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 114 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 102, 14 |
| Conread position: | 204-361 |
| Cow position: | chr3:53578233-53578391 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 204-478 |
| Cow position: | chr3:38124640-38124907 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 188 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 101, 135 |
| Conread position: | 204-521 |
| Cow position: | chr3:48037223-48037530 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 231 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 65, 28 |
| Conread position: | 204-606 |
| Cow position: | chr3:36783233-36783626 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 114 |
| Conread position: | 204-665 |
| Cow position: | chr3:19696739-19696287 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 124 |
| Conread position: | 204-667 |
| Cow position: | chr3:11952444-11952887 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 457, 34 |
| Conread position: | 205-324 |
| Cow position: | chr3:5454684-5454805 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 95 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 205-361 |
| Cow position: | chr3:56305308-56305153 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 101, 134 |
| Conread position: | 205-470 |
| Cow position: | chr3:24797635-24797362 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 101, 38 |
| Conread position: | 205-657 |
| Cow position: | chr3:77944099-77943672 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 60 |
| Conread position: | 205-663 |
| Cow position: | chr3:84919475-84919034 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 140 |
| Conread position: | 206-661 |
| Cow position: | chr3:28207957-28207529 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 39 |
| Conread position: | 206-663 |
| Cow position: | chr3:14296490-14296053 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 104 |
| Conread position: | 206-663 |
| Cow position: | chr3:78548642-78549077 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 5 |
| Conread position: | 207-352 |
| Cow position: | chr3:53910497-53910643 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 49, 121 |
| Conread position: | 207-467 |
| Cow position: | chr3:28462292-28462544 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 99, 117 |
| Conread position: | 207-470 |
| Cow position: | chr3:60520667-60520921 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 186 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 99, 37 |
| Conread position: | 207-598 |
| Cow position: | chr3:5619528-5619157 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 275 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 9, 124 |
| Conread position: | 207-663 |
| Cow position: | chr3:7812900-7812465 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 101 |
| Conread position: | 207-668 |
| Cow position: | chr3:60068022-60067564 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 73 |
| Conread position: | 207-674 |
| Cow position: | chr3:28724953-28724517 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 86 |
| Conread position: | 208-663 |
| Cow position: | chr3:3253553-3253990 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 141 |
| Conread position: | 208-670 |
| Cow position: | chr3:7830242-7830731 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 135 |
| Conread position: | 209-643 |
| Cow position: | chr3:23846947-23846526 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 145 |
| Conread position: | 210-361 |
| Cow position: | chr3:81391021-81391171 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 98, 137 |
| Conread position: | 211-464 |
| Cow position: | chr3:75097498-75097745 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 95, 152 |
| Conread position: | 211-481 |
| Cow position: | chr3:60507873-60508136 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 95, 128 |
| Conread position: | 211-487 |
| Cow position: | chr3:30988293-30988019 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 196 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 17, 129 |
| Conread position: | 211-525 |
| Cow position: | chr3:36780516-36780820 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 228 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 93, 111 |
| Conread position: | 211-570 |
| Cow position: | chr3:29705725-29705386 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 247 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 95, 27 |
| Conread position: | 211-659 |
| Cow position: | chr3:84954631-84955061 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 303 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 95, 136 |
| Conread position: | 211-660 |
| Cow position: | chr3:1839920-1839461 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 136 |
| Conread position: | 211-660 |
| Cow position: | chr3:10687750-10688210 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 135 |
| Conread position: | 211-660 |
| Cow position: | chr3:17641617-17642084 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 98 |
| Conread position: | 211-661 |
| Cow position: | chr3:28485685-28485257 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 128 |
| Conread position: | 211-668 |
| Cow position: | chr3:9194766-9195239 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 65 |
| Conread position: | 211-668 |
| Cow position: | chr3:33020357-33020802 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 135 |
| Conread position: | 211-672 |
| Cow position: | chr3:49006440-49005992 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 34 |
| Conread position: | 211-687 |
| Cow position: | chr3:58307124-58306655 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 139 |
| Conread position: | 211-693 |
| Cow position: | chr3:59205743-59205265 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 118 |
| Conread position: | 212-647 |
| Cow position: | chr3:24773411-24772969 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 127 |
| Conread position: | 212-663 |
| Cow position: | chr3:81387420-81386997 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 297 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 212-668 |
| Cow position: | chr3:22696566-22697012 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 115 |
| Conread position: | 213-482 |
| Cow position: | chr3:16788774-16789039 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 41, 116 |
| Conread position: | 213-501 |
| Cow position: | chr3:3794762-3795051 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 45, 124 |
| Conread position: | 213-683 |
| Cow position: | chr3:11030162-11030632 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 325 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 85, 210 |
| Conread position: | 214-688 |
| Cow position: | chr3:49849796-49850283 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 21 |
| Conread position: | 217-613 |
| Cow position: | chr3:6645710-6645335 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 271 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 41, 15 |
| Conread position: | 220-683 |
| Cow position: | chr3:6762117-6762601 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 96 |
| Conread position: | 229-663 |
| Cow position: | chr3:28443949-28443540 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 233-663 |
| Cow position: | chr3:32168557-32168148 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 292 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 73, 110 |
| Conread position: | 235-643 |
| Cow position: | chr3:48573488-48573101 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 258, 71 |
| Conread position: | 235-663 |
| Cow position: | chr3:48090943-48091353 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 105 |
| Conread position: | 240-660 |
| Cow position: | chr3:7810093-7810507 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 163 |
| Conread position: | 243-643 |
| Cow position: | chr3:1929632-1930002 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 264 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 255, 44 |
| Conread position: | 245-557 |
| Cow position: | chr3:34868489-34868182 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 225 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 36, 101 |
| Conread position: | 245-670 |
| Cow position: | chr3:2060088-2059684 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 83 |
| Conread position: | 262-629 |
| Cow position: | chr3:28593044-28593387 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 258 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 74, 18 |
| Conread position: | 266-670 |
| Cow position: | chr3:10215850-10215442 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 33 |
| Conread position: | 306-668 |
| Cow position: | chr3:28464556-28464907 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 21 |
| Conread position: | 362-660 |
| Cow position: | chr3:65525967-65526256 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 362-667 |
| Cow position: | chr3:28692118-28692404 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 68 |
| Conread position: | 402-648 |
| Cow position: | chr3:60281553-60281312 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 34 |
| Conread position: | 402-660 |
| Cow position: | chr3:6049589-6049335 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 402-672 |
| Cow position: | chr3:28500950-28500687 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 28 |
| Conread position: | 406-680 |
| Cow position: | chr3:56308280-56308543 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 203 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 407-672 |
| Cow position: | chr3:3251542-3251284 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 248, 93 |
| Conread position: | 409-615 |
| Cow position: | chr3:48095269-48095466 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 409-661 |
| Cow position: | chr3:31360188-31360427 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 56, 72 |
| Conread position: | 416-689 |
| Cow position: | chr3:83785625-83785900 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 20 |
| Conread position: | 418-612 |
| Cow position: | chr3:3255220-3255411 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 74, 22 |
| Conread position: | 418-670 |
| Cow position: | chr3:19238817-19239054 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 187 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 39, 14 |
| Conread position: | 424-615 |
| Cow position: | chr3:25899182-25899371 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 155 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 424-670 |
| Cow position: | chr3:45838909-45838664 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 83 |
| Conread position: | 424-674 |
| Cow position: | chr3:14933233-14932988 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 189 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 73, 83 |
| Conread position: | 424-681 |
| Cow position: | chr3:42257329-42257069 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 95, 77 |
| Conread position: | 429-672 |
| Cow position: | chr3:41158785-41158548 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 440-660 |
| Cow position: | chr3:82515719-82515934 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 58, 19 |
| Conread position: | 445-648 |
| Cow position: | chr3:11132744-11132555 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 446-694 |
| Cow position: | chr3:82508320-82508566 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 184 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 97, 36 |
| Conread position: | 459-671 |
| Cow position: | chr3:42936305-42936504 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 523-670 |
| Cow position: | chr3:36781562-36781709 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 553-672 |
| Cow position: | chr3:75097750-75097869 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 77, 51 |
Show alignments to all cow chromosomes.