Cow genome map

Conread name: Ss1.1-Thy1-THY010030C01.5

Conread position: 187-361
Cow position: chr6:55961180-55961009 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 68, 24

Conread position: 198-530
Cow position: chr6:27734042-27734364 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 237
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 20, 47

Conread position: 199-658
Cow position: chr6:37390004-37390445 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 40

Conread position: 199-663
Cow position: chr6:1054721-1055160 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 316
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 19, 155

Conread position: 204-611
Cow position: chr6:5717395-5716993 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 287
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 102, 125

Conread position: 204-615
Cow position: chr6:61542388-61542777 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 7

Conread position: 204-662
Cow position: chr6:26454013-26454442 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 312
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 134, 74

Conread position: 204-680
Cow position: chr6:26451002-26451456 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 14

Conread position: 205-518
Cow position: chr6:46552583-46552886 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 221
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 101, 134

Conread position: 206-613
Cow position: chr6:27413087-27413468 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 283
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 117, 5

Conread position: 206-615
Cow position: chr6:59297604-59297988 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 285
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 12, 115

Conread position: 206-645
Cow position: chr6:16548721-16549163 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 290
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 8, 174

Conread position: 206-672
Cow position: chr6:11177495-11177046 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 37

Conread position: 206-674
Cow position: chr6:61435952-61436400 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 39

Conread position: 206-677
Cow position: chr6:7496672-7497129 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 322
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 100, 140

Conread position: 207-322
Cow position: chr6:15068548-15068664 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 99, 0

Conread position: 207-505
Cow position: chr6:6228070-6227787 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 209
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 13, 120

Conread position: 207-615
Cow position: chr6:1632649-1632260 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 117

Conread position: 207-652
Cow position: chr6:50265672-50266105 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 110

Conread position: 207-663
Cow position: chr6:14883137-14883558 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 318
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 11, 91

Conread position: 207-668
Cow position: chr6:37885002-37884526 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 32

Conread position: 207-672
Cow position: chr6:26242151-26242599 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 50

Conread position: 207-690
Cow position: chr6:49801708-49801214 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 139

Conread position: 208-545
Cow position: chr6:69053771-69054108 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 230
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 48, 130

Conread position: 209-670
Cow position: chr6:60794673-60795124 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 137

Conread position: 211-319
Cow position: chr6:48151040-48151149 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 95, 0

Conread position: 211-509
Cow position: chr6:4017331-4017639 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 219
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 54, 16

Conread position: 211-660
Cow position: chr6:38940029-38939575 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 15

Conread position: 211-660
Cow position: chr6:62859873-62860329 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 133

Conread position: 211-663
Cow position: chr6:45339525-45339955 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 306
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 95, 104

Conread position: 211-668
Cow position: chr6:50743429-50742985 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 80

Conread position: 213-648
Cow position: chr6:38823573-38823994 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 297
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 64, 45

Conread position: 220-663
Cow position: chr6:47226373-47225918 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 275

Conread position: 221-643
Cow position: chr6:47228559-47228972 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 29

Conread position: 233-668
Cow position: chr6:62994330-62993888 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 25

Conread position: 244-663
Cow position: chr6:60064781-60065180 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 281
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 62, 91

Conread position: 245-666
Cow position: chr6:44495937-44496349 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 41

Conread position: 262-660
Cow position: chr6:24803512-24803921 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 74

Conread position: 281-671
Cow position: chr6:54337758-54338138 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 277
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 28, 72

Conread position: 328-662
Cow position: chr6:53233548-53233871 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 227
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 297, 64

Conread position: 344-672
Cow position: chr6:5984180-5984503 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 239
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 124, 21

Conread position: 362-670
Cow position: chr6:16604671-16604373 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 398-662
Cow position: chr6:15068710-15068964 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 192
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 12, 83

Conread position: 402-650
Cow position: chr6:67782311-67782066 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 187
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 167, 56

Conread position: 405-660
Cow position: chr6:44231090-44231333 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 183
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 142, 75

Conread position: 418-670
Cow position: chr6:97873-98114 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 189
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 122, 16

Conread position: 424-602
Cow position: chr6:27959358-27959187 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 139
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 44, 49

Conread position: 424-625
Cow position: chr6:23899851-23900049 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 160
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 30, 0

Conread position: 447-681
Cow position: chr6:56910012-56909779 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 174
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 152, 35

Conread position: 462-672
Cow position: chr6:46378648-46378438 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 167
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 89, 40

Conread position: 533-672
Cow position: chr6:4017618-4017758 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 95, 14

Show alignments to all cow chromosomes.