Cow genome map
| Conread name: | Ss1.1-Thy1-THY010030C01.5 |
| Conread position: | 193-342 |
| Cow position: | |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 113, 6 |
| Conread position: | 197-663 |
| Cow position: | |
| Alignm length: | 469 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 14 |
| Conread position: | 200-514 |
| Cow position: | |
| Alignm length: | 317 |
| Alignm identity: | 221 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 106, 44 |
| Conread position: | 200-615 |
| Cow position: | |
| Alignm length: | 418 |
| Alignm identity: | 288 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 105, 11 |
| Conread position: | 201-660 |
| Cow position: | |
| Alignm length: | 476 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 61 |
| Conread position: | 203-663 |
| Cow position: | |
| Alignm length: | 467 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 44 |
| Conread position: | 204-648 |
| Cow position: | |
| Alignm length: | 448 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 21 |
| Conread position: | 204-663 |
| Cow position: | |
| Alignm length: | 464 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 31 |
| Conread position: | 204-663 |
| Cow position: | |
| Alignm length: | 463 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 94 |
| Conread position: | 205-670 |
| Cow position: | |
| Alignm length: | 469 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 84 |
| Conread position: | 206-468 |
| Cow position: | |
| Alignm length: | 266 |
| Alignm identity: | 186 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 102, 126 |
| Conread position: | 206-532 |
| Cow position: | |
| Alignm length: | 333 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 9, 95 |
| Conread position: | 206-567 |
| Cow position: | |
| Alignm length: | 363 |
| Alignm identity: | 247 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 100, 5 |
| Conread position: | 206-662 |
| Cow position: | |
| Alignm length: | 467 |
| Alignm identity: | 311 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 52, 5 |
| Conread position: | 206-663 |
| Cow position: | |
| Alignm length: | 462 |
| Alignm identity: | 313 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 12, 23 |
| Conread position: | 206-663 |
| Cow position: | |
| Alignm length: | 468 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 5 |
| Conread position: | 206-668 |
| Cow position: | |
| Alignm length: | 472 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 13 |
| Conread position: | 207-361 |
| Cow position: | |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 10, 135 |
| Conread position: | 207-578 |
| Cow position: | |
| Alignm length: | 374 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 132 |
| Conread position: | 207-628 |
| Cow position: | |
| Alignm length: | 425 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 131 |
| Conread position: | 207-663 |
| Cow position: | |
| Alignm length: | 467 |
| Alignm identity: | 306 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 11, 101 |
| Conread position: | 207-668 |
| Cow position: | |
| Alignm length: | 470 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 123 |
| Conread position: | 207-670 |
| Cow position: | |
| Alignm length: | 476 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 33 |
| Conread position: | 209-672 |
| Cow position: | |
| Alignm length: | 466 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 23 |
| Conread position: | 211-663 |
| Cow position: | |
| Alignm length: | 456 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 109 |
| Conread position: | 212-650 |
| Cow position: | |
| Alignm length: | 458 |
| Alignm identity: | 313 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 97, 49 |
| Conread position: | 212-660 |
| Cow position: | |
| Alignm length: | 467 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 24 |
| Conread position: | 220-659 |
| Cow position: | |
| Alignm length: | 441 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 42 |
| Conread position: | 222-670 |
| Cow position: | |
| Alignm length: | 452 |
| Alignm identity: | 306 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 61, 52 |
| Conread position: | 228-672 |
| Cow position: | |
| Alignm length: | 449 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 157 |
| Conread position: | 231-656 |
| Cow position: | |
| Alignm length: | 429 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 25 |
| Conread position: | 258-670 |
| Cow position: | |
| Alignm length: | 415 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 88 |
| Conread position: | 262-693 |
| Cow position: | |
| Alignm length: | 433 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 36 |
| Conread position: | 294-663 |
| Cow position: | |
| Alignm length: | 372 |
| Alignm identity: | 250 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 12, 52 |
| Conread position: | 362-660 |
| Cow position: | |
| Alignm length: | 299 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 378-668 |
| Cow position: | |
| Alignm length: | 292 |
| Alignm identity: | 210 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 138, 28 |
| Conread position: | 385-672 |
| Cow position: | |
| Alignm length: | 291 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 256, 112 |
| Conread position: | 397-663 |
| Cow position: | |
| Alignm length: | 268 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 243, 83 |
| Conread position: | 406-670 |
| Cow position: | |
| Alignm length: | 265 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 413-663 |
| Cow position: | |
| Alignm length: | 251 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 414-670 |
| Cow position: | |
| Alignm length: | 262 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 68 |
| Conread position: | 418-670 |
| Cow position: | |
| Alignm length: | 255 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 16 |
| Conread position: | 418-670 |
| Cow position: | |
| Alignm length: | 258 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 16 |
| Conread position: | 418-670 |
| Cow position: | |
| Alignm length: | 255 |
| Alignm identity: | 190 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 128, 14 |
| Conread position: | 421-663 |
| Cow position: | |
| Alignm length: | 243 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 424-666 |
| Cow position: | |
| Alignm length: | 248 |
| Alignm identity: | 188 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 67, 84 |
| Conread position: | 424-671 |
| Cow position: | |
| Alignm length: | 248 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 427-670 |
| Cow position: | |
| Alignm length: | 258 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 64, 81 |
| Conread position: | 476-671 |
| Cow position: | |
| Alignm length: | 199 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 21, 36 |
Show alignments to all cow chromosomes.