Cow genome map
| Conread name: | Ss1.1-Thy1-THY010030C01.5 |
| Conread position: | 184-663 |
| Cow position: | |
| Alignm length: | 481 |
| Alignm identity: | 326 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 148, 27 |
| Conread position: | 187-670 |
| Cow position: | |
| Alignm length: | 487 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 31 |
| Conread position: | 189-359 |
| Cow position: | |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 27, 134 |
| Conread position: | 192-521 |
| Cow position: | |
| Alignm length: | 332 |
| Alignm identity: | 232 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 114, 147 |
| Conread position: | 198-663 |
| Cow position: | |
| Alignm length: | 487 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 40 |
| Conread position: | 199-466 |
| Cow position: | |
| Alignm length: | 269 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 107, 139 |
| Conread position: | 200-669 |
| Cow position: | |
| Alignm length: | 479 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 68 |
| Conread position: | 201-663 |
| Cow position: | |
| Alignm length: | 470 |
| Alignm identity: | 288 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 131, 168 |
| Conread position: | 201-680 |
| Cow position: | |
| Alignm length: | 486 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 17 |
| Conread position: | 204-496 |
| Cow position: | |
| Alignm length: | 295 |
| Alignm identity: | 211 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 102, 123 |
| Conread position: | 204-674 |
| Cow position: | |
| Alignm length: | 483 |
| Alignm identity: | 322 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 102, 178 |
| Conread position: | 205-600 |
| Cow position: | |
| Alignm length: | 399 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 145 |
| Conread position: | 206-459 |
| Cow position: | |
| Alignm length: | 257 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 12, 140 |
| Conread position: | 206-661 |
| Cow position: | |
| Alignm length: | 463 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 5 |
| Conread position: | 206-663 |
| Cow position: | |
| Alignm length: | 460 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 5 |
| Conread position: | 206-670 |
| Cow position: | |
| Alignm length: | 472 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 12 |
| Conread position: | 207-320 |
| Cow position: | |
| Alignm length: | 115 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 207-493 |
| Cow position: | |
| Alignm length: | 293 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 60, 11 |
| Conread position: | 207-663 |
| Cow position: | |
| Alignm length: | 471 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 140 |
| Conread position: | 207-668 |
| Cow position: | |
| Alignm length: | 467 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 142 |
| Conread position: | 207-674 |
| Cow position: | |
| Alignm length: | 476 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 133 |
| Conread position: | 208-653 |
| Cow position: | |
| Alignm length: | 456 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 138 |
| Conread position: | 208-672 |
| Cow position: | |
| Alignm length: | 483 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 140 |
| Conread position: | 210-500 |
| Cow position: | |
| Alignm length: | 303 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 125, 51 |
| Conread position: | 210-668 |
| Cow position: | |
| Alignm length: | 475 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 21 |
| Conread position: | 211-396 |
| Cow position: | |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 95, 48 |
| Conread position: | 211-548 |
| Cow position: | |
| Alignm length: | 343 |
| Alignm identity: | 231 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 95, 140 |
| Conread position: | 211-569 |
| Cow position: | |
| Alignm length: | 360 |
| Alignm identity: | 245 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 146, 75 |
| Conread position: | 211-608 |
| Cow position: | |
| Alignm length: | 424 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 32 |
| Conread position: | 211-660 |
| Cow position: | |
| Alignm length: | 453 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 128 |
| Conread position: | 211-670 |
| Cow position: | |
| Alignm length: | 462 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 136 |
| Conread position: | 211-670 |
| Cow position: | |
| Alignm length: | 466 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 125 |
| Conread position: | 211-689 |
| Cow position: | |
| Alignm length: | 485 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 28 |
| Conread position: | 211-691 |
| Cow position: | |
| Alignm length: | 482 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 33 |
| Conread position: | 212-602 |
| Cow position: | |
| Alignm length: | 395 |
| Alignm identity: | 276 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 94, 115 |
| Conread position: | 212-657 |
| Cow position: | |
| Alignm length: | 462 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 201 |
| Conread position: | 213-668 |
| Cow position: | |
| Alignm length: | 465 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 114 |
| Conread position: | 214-615 |
| Cow position: | |
| Alignm length: | 417 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 280 |
| Conread position: | 215-615 |
| Cow position: | |
| Alignm length: | 416 |
| Alignm identity: | 281 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 93, 53 |
| Conread position: | 221-672 |
| Cow position: | |
| Alignm length: | 452 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 222-648 |
| Cow position: | |
| Alignm length: | 430 |
| Alignm identity: | 284 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 299, 15 |
| Conread position: | 225-533 |
| Cow position: | |
| Alignm length: | 317 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 36, 102 |
| Conread position: | 231-671 |
| Cow position: | |
| Alignm length: | 450 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 7 |
| Conread position: | 232-639 |
| Cow position: | |
| Alignm length: | 411 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 94 |
| Conread position: | 233-663 |
| Cow position: | |
| Alignm length: | 432 |
| Alignm identity: | 287 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 73, 102 |
| Conread position: | 234-682 |
| Cow position: | |
| Alignm length: | 464 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 72 |
| Conread position: | 238-682 |
| Cow position: | |
| Alignm length: | 446 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 59 |
| Conread position: | 243-661 |
| Cow position: | |
| Alignm length: | 423 |
| Alignm identity: | 291 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 63, 71 |
| Conread position: | 362-541 |
| Cow position: | |
| Alignm length: | 180 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 364-548 |
| Cow position: | |
| Alignm length: | 186 |
| Alignm identity: | 150 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 106, 138 |
| Conread position: | 374-668 |
| Cow position: | |
| Alignm length: | 296 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 267, 24 |
| Conread position: | 374-669 |
| Cow position: | |
| Alignm length: | 302 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 138 |
| Conread position: | 424-670 |
| Cow position: | |
| Alignm length: | 252 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 67, 84 |
| Conread position: | 424-671 |
| Cow position: | |
| Alignm length: | 248 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 438-670 |
| Cow position: | |
| Alignm length: | 236 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 74 |
| Conread position: | 453-659 |
| Cow position: | |
| Alignm length: | 208 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 47, 60 |
Show alignments to all cow chromosomes.