Cow genome map
| Conread name: | Ss1.1-Thy1-THY010030C01.5 |
| Conread position: | 189-467 |
| Cow position: | |
| Alignm length: | 285 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 19, 9 |
| Conread position: | 197-613 |
| Cow position: | |
| Alignm length: | 420 |
| Alignm identity: | 288 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 109, 10 |
| Conread position: | 200-656 |
| Cow position: | |
| Alignm length: | 472 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 187 |
| Conread position: | 201-687 |
| Cow position: | |
| Alignm length: | 490 |
| Alignm identity: | 332 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 57, 25 |
| Conread position: | 201-694 |
| Cow position: | |
| Alignm length: | 498 |
| Alignm identity: | 330 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 105, 76 |
| Conread position: | 204-535 |
| Cow position: | |
| Alignm length: | 334 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 102, 7 |
| Conread position: | 204-663 |
| Cow position: | |
| Alignm length: | 461 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 118 |
| Conread position: | 204-663 |
| Cow position: | |
| Alignm length: | 481 |
| Alignm identity: | 329 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 14, 130 |
| Conread position: | 206-668 |
| Cow position: | |
| Alignm length: | 467 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 124 |
| Conread position: | 207-353 |
| Cow position: | |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 49, 11 |
| Conread position: | 207-468 |
| Cow position: | |
| Alignm length: | 267 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 11, 133 |
| Conread position: | 207-663 |
| Cow position: | |
| Alignm length: | 466 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 169 |
| Conread position: | 207-672 |
| Cow position: | |
| Alignm length: | 467 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 120 |
| Conread position: | 211-359 |
| Cow position: | |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 211-474 |
| Cow position: | |
| Alignm length: | 268 |
| Alignm identity: | 193 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 96, 114 |
| Conread position: | 211-660 |
| Cow position: | |
| Alignm length: | 453 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 22 |
| Conread position: | 211-663 |
| Cow position: | |
| Alignm length: | 467 |
| Alignm identity: | 308 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 100, 125 |
| Conread position: | 211-663 |
| Cow position: | |
| Alignm length: | 457 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 96 |
| Conread position: | 211-667 |
| Cow position: | |
| Alignm length: | 477 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 118 |
| Conread position: | 211-668 |
| Cow position: | |
| Alignm length: | 461 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 51 |
| Conread position: | 211-674 |
| Cow position: | |
| Alignm length: | 468 |
| Alignm identity: | 318 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 95, 109 |
| Conread position: | 212-361 |
| Cow position: | |
| Alignm length: | 154 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 98, 135 |
| Conread position: | 212-397 |
| Cow position: | |
| Alignm length: | 188 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 213-659 |
| Cow position: | |
| Alignm length: | 458 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 19 |
| Conread position: | 217-663 |
| Cow position: | |
| Alignm length: | 451 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 27 |
| Conread position: | 234-672 |
| Cow position: | |
| Alignm length: | 443 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 9 |
| Conread position: | 243-617 |
| Cow position: | |
| Alignm length: | 377 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 237, 63 |
| Conread position: | 245-663 |
| Cow position: | |
| Alignm length: | 434 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 90 |
| Conread position: | 279-660 |
| Cow position: | |
| Alignm length: | 394 |
| Alignm identity: | 270 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 44, 32 |
| Conread position: | 355-666 |
| Cow position: | |
| Alignm length: | 314 |
| Alignm identity: | 218 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 25, 44 |
| Conread position: | 379-663 |
| Cow position: | |
| Alignm length: | 285 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 402-672 |
| Cow position: | |
| Alignm length: | 271 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 402-672 |
| Cow position: | |
| Alignm length: | 271 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 403-564 |
| Cow position: | |
| Alignm length: | 163 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 6, 78 |
| Conread position: | 409-672 |
| Cow position: | |
| Alignm length: | 275 |
| Alignm identity: | 206 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 6, 16 |
| Conread position: | 412-668 |
| Cow position: | |
| Alignm length: | 257 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 413-670 |
| Cow position: | |
| Alignm length: | 260 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 11 |
| Conread position: | 418-670 |
| Cow position: | |
| Alignm length: | 258 |
| Alignm identity: | 197 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 79, 16 |
| Conread position: | 424-670 |
| Cow position: | |
| Alignm length: | 248 |
| Alignm identity: | 186 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 124, 76 |
| Conread position: | 425-670 |
| Cow position: | |
| Alignm length: | 248 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 57 |
| Conread position: | 428-626 |
| Cow position: | |
| Alignm length: | 199 |
| Alignm identity: | 168 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 437-662 |
| Cow position: | |
| Alignm length: | 230 |
| Alignm identity: | 179 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 60, 75 |
| Conread position: | 437-670 |
| Cow position: | |
| Alignm length: | 237 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 75 |
| Conread position: | 437-670 |
| Cow position: | |
| Alignm length: | 238 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 70 |
| Conread position: | 441-649 |
| Cow position: | |
| Alignm length: | 222 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 52, 75 |
| Conread position: | 441-670 |
| Cow position: | |
| Alignm length: | 244 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 56, 77 |
| Conread position: | 442-670 |
| Cow position: | |
| Alignm length: | 230 |
| Alignm identity: | 175 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 51, 71 |
| Conread position: | 442-670 |
| Cow position: | |
| Alignm length: | 232 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 70 |
| Conread position: | 450-648 |
| Cow position: | |
| Alignm length: | 199 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 475-672 |
| Cow position: | |
| Alignm length: | 200 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 73, 35 |
| Conread position: | 492-666 |
| Cow position: | |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 67, 19 |
Show alignments to all cow chromosomes.