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Cow genome map

           
Conread name:
           
Ss1.1-Thy1-THY010030C05.5.5
        

               
Conread position:
               
3-207
               

               
Cow position:
               
chr4:4736832-4737024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
87, 31
               

               
Conread position:
               
3-270
               

               
Cow position:
               
chr4:33395895-33395626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 49
               

               
Conread position:
               
3-289
               

               
Cow position:
               
chr4:54111538-54111839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
50, 93
               

               
Conread position:
               
3-368
               

               
Cow position:
               
chr4:19097086-19097465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
53, 85
               

               
Conread position:
               
3-378
               

               
Cow position:
               
chr4:19238034-19238403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 143
               

               
Conread position:
               
3-378
               

               
Cow position:
               
chr4:58834611-58834232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
33, 93
               

               
Conread position:
               
4-189
               

               
Cow position:
               
chr4:19558512-19558713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
31, 11
               

               
Conread position:
               
4-315
               

               
Cow position:
               
chr4:38887339-38886987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
52, 24
               

               
Conread position:
               
4-372
               

               
Cow position:
               
chr4:27344875-27344503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
52, 88
               

               
Conread position:
               
5-288
               

               
Cow position:
               
chr4:25359405-25359688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
51, 162
               

               
Conread position:
               
5-375
               

               
Cow position:
               
chr4:55395565-55395944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 28
               

               
Conread position:
               
6-201
               

               
Cow position:
               
chr4:16091602-16091399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
39, 79
               

               
Conread position:
               
6-202
               

               
Cow position:
               
chr4:41907994-41907797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
48, 78
               

               
Conread position:
               
6-266
               

               
Cow position:
               
chr4:68362740-68362989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
152, 37
               

               
Conread position:
               
7-131
               

               
Cow position:
               
chr4:2536630-2536755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
47, 77
               

               
Conread position:
               
8-269
               

               
Cow position:
               
chr4:2885741-2885469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
7, 31
               

               
Conread position:
               
9-208
               

               
Cow position:
               
chr4:52167044-52166841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
105, 22
               

               
Conread position:
               
9-249
               

               
Cow position:
               
chr4:123399-123159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
36, 6
               

               
Conread position:
               
9-350
               

               
Cow position:
               
chr4:16736304-16736693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
9-363
               

               
Cow position:
               
chr4:13941260-13941620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 223
               

               
Conread position:
               
9-381
               

               
Cow position:
               
chr4:961863-961477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 83
               

               
Conread position:
               
9-390
               

               
Cow position:
               
chr4:18095878-18095459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 211
               

               
Conread position:
               
10-194
               

               
Cow position:
               
chr4:3475433-3475626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
10-266
               

               
Cow position:
               
chr4:29237352-29237103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
105, 43
               

               
Conread position:
               
10-267
               

               
Cow position:
               
chr4:18255665-18255921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
104, 25
               

               
Conread position:
               
10-302
               

               
Cow position:
               
chr4:20842722-20843017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
35, 84
               

               
Conread position:
               
10-305
               

               
Cow position:
               
chr4:43866049-43865742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
106, 23
               

               
Conread position:
               
10-354
               

               
Cow position:
               
chr4:66256489-66256842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
44, 24
               

               
Conread position:
               
10-362
               

               
Cow position:
               
chr4:9137076-9137454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
39, 65
               

               
Conread position:
               
10-378
               

               
Cow position:
               
chr4:85497-85879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
57, 31
               

               
Conread position:
               
10-388
               

               
Cow position:
               
chr4:46383572-46383168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
39, 80
               

               
Conread position:
               
10-400
               

               
Cow position:
               
chr4:10968583-10968188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 136
               

               
Conread position:
               
10-419
               

               
Cow position:
               
chr4:28772265-28771842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
45, 61
               

               
Conread position:
               
11-188
               

               
Cow position:
               
chr4:29813738-29813554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
45, 16
               

               
Conread position:
               
11-269
               

               
Cow position:
               
chr4:33623521-33623784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
45, 120
               

               
Conread position:
               
11-269
               

               
Cow position:
               
chr4:34171768-34171511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
37, 156
               

               
Conread position:
               
11-310
               

               
Cow position:
               
chr4:65179328-65179039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
38, 7
               

               
Conread position:
               
11-312
               

               
Cow position:
               
chr4:36730993-36731312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
33, 165
               

               
Conread position:
               
11-350
               

               
Cow position:
               
chr4:15623646-15624001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
46, 81
               

               
Conread position:
               
11-378
               

               
Cow position:
               
chr4:29291325-29291691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 13
               

               
Conread position:
               
11-378
               

               
Cow position:
               
chr4:34208731-34209121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
27, 263
               

               
Conread position:
               
11-402
               

               
Cow position:
               
chr4:4085334-4084897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
32, 333
               

               
Conread position:
               
12-142
               

               
Cow position:
               
chr4:41292176-41292041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
33, 82
               

               
Conread position:
               
12-147
               

               
Cow position:
               
chr4:46668374-46668513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
42, 65
               

               
Conread position:
               
12-151
               

               
Cow position:
               
chr4:53447862-53447718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
12-154
               

               
Cow position:
               
chr4:12259977-12259828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
40, 72
               

               
Conread position:
               
12-159
               

               
Cow position:
               
chr4:54667887-54667730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
12-160
               

               
Cow position:
               
chr4:43370046-43369893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
106, 41
               

               
Conread position:
               
12-161
               

               
Cow position:
               
chr4:43542929-43542775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
37, 103
               

               
Conread position:
               
12-165
               

               
Cow position:
               
chr4:46370614-46370779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
29, 76
               

               
Conread position:
               
12-168
               

               
Cow position:
               
chr4:54501645-54501481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
42, 72
               

               
Conread position:
               
12-194
               

               
Cow position:
               
chr4:568699-568897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
32, 175
               

               
Conread position:
               
12-198
               

               
Cow position:
               
chr4:1915774-1915578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
41, 72
               

               
Conread position:
               
12-198
               

               
Cow position:
               
chr4:43495705-43495897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
43, 80
               

               
Conread position:
               
12-202
               

               
Cow position:
               
chr4:37553240-37553035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
42, 76
               

               
Conread position:
               
12-203
               

               
Cow position:
               
chr4:36724846-36725046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
44, 23
               

               
Conread position:
               
12-203
               

               
Cow position:
               
chr4:46274997-46275183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
43, 48
               

               
Conread position:
               
12-203
               

               
Cow position:
               
chr4:48137713-48137917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
26, 73
               

               
Conread position:
               
12-203
               

               
Cow position:
               
chr4:53999703-53999505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
104, 69
               

               
Conread position:
               
12-203
               

               
Cow position:
               
chr4:56233491-56233687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
44, 78
               

               
Conread position:
               
12-203
               

               
Cow position:
               
chr4:56409985-56410183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
28, 119
               

               
Conread position:
               
12-203
               

               
Cow position:
               
chr4:65731116-65730915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
12-205
               

               
Cow position:
               
chr4:10016798-10016595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
23, 86
               

               
Conread position:
               
12-206
               

               
Cow position:
               
chr4:52497771-52497589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
153, 30
               

               
Conread position:
               
12-208
               

               
Cow position:
               
chr4:37465781-37465586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
42, 71
               

               
Conread position:
               
12-208
               

               
Cow position:
               
chr4:54975112-54975306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
121, 43
               

               
Conread position:
               
12-208
               

               
Cow position:
               
chr4:63813498-63813303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
44, 25
               

               
Conread position:
               
12-209
               

               
Cow position:
               
chr4:19542600-19542806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
43, 31
               

               
Conread position:
               
12-211
               

               
Cow position:
               
chr4:480203-479995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
26, 81
               

               
Conread position:
               
12-211
               

               
Cow position:
               
chr4:11901759-11901548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
43, 138
               

               
Conread position:
               
12-211
               

               
Cow position:
               
chr4:27687727-27687940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
44, 79
               

               
Conread position:
               
12-211
               

               
Cow position:
               
chr4:30690528-30690728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
43, 33
               

               
Conread position:
               
12-211
               

               
Cow position:
               
chr4:33357734-33357949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
33, 82
               

               
Conread position:
               
12-214
               

               
Cow position:
               
chr4:46501158-46501360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
62, 43
               

               
Conread position:
               
12-216
               

               
Cow position:
               
chr4:26746288-26746501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
89, 68
               

               
Conread position:
               
12-218
               

               
Cow position:
               
chr4:51630461-51630662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
33, 97
               

               
Conread position:
               
12-219
               

               
Cow position:
               
chr4:43750008-43749792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
24, 74
               

               
Conread position:
               
12-220
               

               
Cow position:
               
chr4:49424642-49424848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
143, 40
               

               
Conread position:
               
12-221
               

               
Cow position:
               
chr4:22051666-22051448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
40, 59
               

               
Conread position:
               
12-223
               

               
Cow position:
               
chr4:47289874-47290103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
12-223
               

               
Cow position:
               
chr4:53545836-53546056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
42, 23
               

               
Conread position:
               
12-224
               

               
Cow position:
               
chr4:24119105-24118881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
40, 72
               

               
Conread position:
               
12-227
               

               
Cow position:
               
chr4:5984241-5984017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
26, 165
               

               
Conread position:
               
12-228
               

               
Cow position:
               
chr4:59106007-59105795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
33, 84
               

               
Conread position:
               
12-230
               

               
Cow position:
               
chr4:11201621-11201852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
12-230
               

               
Cow position:
               
chr4:11671256-11671484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
12-230
               

               
Cow position:
               
chr4:53209039-53209269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
12-231
               

               
Cow position:
               
chr4:23911786-23911561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
36, 153
               

               
Conread position:
               
12-232
               

               
Cow position:
               
chr4:19463295-19463530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
26, 84
               

               
Conread position:
               
12-233
               

               
Cow position:
               
chr4:46058947-46058729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
42, 146
               

               
Conread position:
               
12-234
               

               
Cow position:
               
chr4:37620084-37619852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 82
               

               
Conread position:
               
12-238
               

               
Cow position:
               
chr4:3689512-3689744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
41, 72
               

               
Conread position:
               
12-238
               

               
Cow position:
               
chr4:26469452-26469663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
58, 67
               

               
Conread position:
               
12-238
               

               
Cow position:
               
chr4:35940208-35939967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
12-248
               

               
Cow position:
               
chr4:1354810-1354575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
97, 41
               

               
Conread position:
               
12-248
               

               
Cow position:
               
chr4:58261350-58261100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
12-250
               

               
Cow position:
               
chr4:20299074-20299326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
28, 69
               

               
Conread position:
               
12-250
               

               
Cow position:
               
chr4:38799391-38799149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
32, 115
               

               
Conread position:
               
12-257
               

               
Cow position:
               
chr4:50203551-50203813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
36, 254
               

               
Conread position:
               
12-259
               

               
Cow position:
               
chr4:16339789-16339543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
43, 71
               

               
Conread position:
               
12-260
               

               
Cow position:
               
chr4:42922042-42921798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
121, 35
               

               
Conread position:
               
12-262
               

               
Cow position:
               
chr4:58903941-58903672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
12-263
               

               
Cow position:
               
chr4:13043074-13043328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
74, 58
               

               
Conread position:
               
12-264
               

               
Cow position:
               
chr4:17474242-17474505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 27
               

               
Conread position:
               
12-264
               

               
Cow position:
               
chr4:24002166-24001899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
12-264
               

               
Cow position:
               
chr4:25806703-25806965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
27, 140
               

               
Conread position:
               
12-264
               

               
Cow position:
               
chr4:34337466-34337206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
31, 83
               

               
Conread position:
               
12-264
               

               
Cow position:
               
chr4:54468491-54468237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
33, 163
               

               
Conread position:
               
12-267
               

               
Cow position:
               
chr4:13435546-13435806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
43, 86
               

               
Conread position:
               
12-268
               

               
Cow position:
               
chr4:11331893-11332167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
10, 81
               

               
Conread position:
               
12-268
               

               
Cow position:
               
chr4:16799389-16799116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
12-268
               

               
Cow position:
               
chr4:23854008-23854250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 27
               

               
Conread position:
               
12-268
               

               
Cow position:
               
chr4:33612559-33612289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
42, 76
               

               
Conread position:
               
12-268
               

               
Cow position:
               
chr4:59008566-59008285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
36, 203
               

               
Conread position:
               
12-268
               

               
Cow position:
               
chr4:63459412-63459153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
33, 82
               

               
Conread position:
               
12-268
               

               
Cow position:
               
chr4:65841958-65841696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
44, 80
               

               
Conread position:
               
12-268
               

               
Cow position:
               
chr4:66112273-66112001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
19, 76
               

               
Conread position:
               
12-269
               

               
Cow position:
               
chr4:2893828-2894102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
12-269
               

               
Cow position:
               
chr4:19007846-19008117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
12-269
               

               
Cow position:
               
chr4:57147121-57147376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
33, 153
               

               
Conread position:
               
12-270
               

               
Cow position:
               
chr4:44973446-44973706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
77, 41
               

               
Conread position:
               
12-272
               

               
Cow position:
               
chr4:39231719-39231448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 86
               

               
Conread position:
               
12-274
               

               
Cow position:
               
chr4:51739899-51739640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
42, 26
               

               
Conread position:
               
12-288
               

               
Cow position:
               
chr4:24744611-24744317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
28, 78
               

               
Conread position:
               
12-296
               

               
Cow position:
               
chr4:20720-21017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 81
               

               
Conread position:
               
12-296
               

               
Cow position:
               
chr4:5461056-5460757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 23
               

               
Conread position:
               
12-297
               

               
Cow position:
               
chr4:8704788-8705100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
33, 67
               

               
Conread position:
               
12-306
               

               
Cow position:
               
chr4:25879199-25879506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 201
               

               
Conread position:
               
12-306
               

               
Cow position:
               
chr4:27755497-27755187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
44, 79
               

               
Conread position:
               
12-306
               

               
Cow position:
               
chr4:39128335-39128653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
43, 74
               

               
Conread position:
               
12-308
               

               
Cow position:
               
chr4:10905655-10905352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
44, 63
               

               
Conread position:
               
12-308
               

               
Cow position:
               
chr4:41441369-41441683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
33, 84
               

               
Conread position:
               
12-309
               

               
Cow position:
               
chr4:45644508-45644200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
32, 76
               

               
Conread position:
               
12-311
               

               
Cow position:
               
chr4:5999389-5999087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
43, 128
               

               
Conread position:
               
12-311
               

               
Cow position:
               
chr4:27540425-27540727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
42, 78
               

               
Conread position:
               
12-312
               

               
Cow position:
               
chr4:10056015-10056326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
69, 141
               

               
Conread position:
               
12-314
               

               
Cow position:
               
chr4:11496827-11496528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
43, 77
               

               
Conread position:
               
12-314
               

               
Cow position:
               
chr4:34210969-34211291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
90, 22
               

               
Conread position:
               
12-316
               

               
Cow position:
               
chr4:37935477-37935160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 76
               

               
Conread position:
               
12-317
               

               
Cow position:
               
chr4:49089598-49089911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
111, 46
               

               
Conread position:
               
12-318
               

               
Cow position:
               
chr4:11872108-11871796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
37, 82
               

               
Conread position:
               
12-318
               

               
Cow position:
               
chr4:44839081-44838767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
94, 45
               

               
Conread position:
               
12-319
               

               
Cow position:
               
chr4:13974168-13973841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 82
               

               
Conread position:
               
12-319
               

               
Cow position:
               
chr4:21874633-21874931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
258, 22
               

               
Conread position:
               
12-319
               

               
Cow position:
               
chr4:22345211-22344904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 76
               

               
Conread position:
               
12-319
               

               
Cow position:
               
chr4:30791768-30792097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 138
               

               
Conread position:
               
12-319
               

               
Cow position:
               
chr4:32726026-32726352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 84
               

               
Conread position:
               
12-319
               

               
Cow position:
               
chr4:44782178-44782503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 18
               

               
Conread position:
               
12-319
               

               
Cow position:
               
chr4:58881163-58880831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
47, 83
               

               
Conread position:
               
12-319
               

               
Cow position:
               
chr4:65650321-65650006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 21
               

               
Conread position:
               
12-323
               

               
Cow position:
               
chr4:14919803-14920118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
69, 15
               

               
Conread position:
               
12-324
               

               
Cow position:
               
chr4:21392009-21391683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
42, 72
               

               
Conread position:
               
12-329
               

               
Cow position:
               
chr4:41301187-41300860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 79
               

               
Conread position:
               
12-330
               

               
Cow position:
               
chr4:12903621-12903961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
29, 81
               

               
Conread position:
               
12-331
               

               
Cow position:
               
chr4:53100609-53100945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
33, 82
               

               
Conread position:
               
12-332
               

               
Cow position:
               
chr4:2602034-2602374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 80
               

               
Conread position:
               
12-336
               

               
Cow position:
               
chr4:42480991-42481327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
20, 82
               

               
Conread position:
               
12-337
               

               
Cow position:
               
chr4:45583324-45582970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 225
               

               
Conread position:
               
12-340
               

               
Cow position:
               
chr4:23599974-23600315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
16, 94
               

               
Conread position:
               
12-347
               

               
Cow position:
               
chr4:20157608-20157271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
24, 39
               

               
Conread position:
               
12-348
               

               
Cow position:
               
chr4:23526501-23526857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 47
               

               
Conread position:
               
12-348
               

               
Cow position:
               
chr4:38999230-38999579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 76
               

               
Conread position:
               
12-348
               

               
Cow position:
               
chr4:46477135-46476784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
33, 82
               

               
Conread position:
               
12-348
               

               
Cow position:
               
chr4:51768916-51769264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 82
               

               
Conread position:
               
12-349
               

               
Cow position:
               
chr4:36893157-36893523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
33, 82
               

               
Conread position:
               
12-350
               

               
Cow position:
               
chr4:19548800-19549152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
43, 133
               

               
Conread position:
               
12-351
               

               
Cow position:
               
chr4:6653536-6653881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 77
               

               
Conread position:
               
12-352
               

               
Cow position:
               
chr4:11021846-11021496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 20
               

               
Conread position:
               
12-353
               

               
Cow position:
               
chr4:3388348-3388706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
12-354
               

               
Cow position:
               
chr4:7571213-7571570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
14, 78
               

               
Conread position:
               
12-355
               

               
Cow position:
               
chr4:48235443-48235791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
33, 105
               

               
Conread position:
               
12-355
               

               
Cow position:
               
chr4:49813863-49813516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
36, 144
               

               
Conread position:
               
12-355
               

               
Cow position:
               
chr4:66118723-66118369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
44, 140
               

               
Conread position:
               
12-356
               

               
Cow position:
               
chr4:11004915-11004572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
43, 26
               

               
Conread position:
               
12-358
               

               
Cow position:
               
chr4:25889029-25888679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 82
               

               
Conread position:
               
12-360
               

               
Cow position:
               
chr4:24372047-24371690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 77
               

               
Conread position:
               
12-362
               

               
Cow position:
               
chr4:3820226-3820598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
52, 79
               

               
Conread position:
               
12-362
               

               
Cow position:
               
chr4:17833102-17832730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
12-362
               

               
Cow position:
               
chr4:19265376-19265745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
33, 211
               

               
Conread position:
               
12-364
               

               
Cow position:
               
chr4:45738678-45738293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
12-365
               

               
Cow position:
               
chr4:46456246-46455895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 35
               

               
Conread position:
               
12-365
               

               
Cow position:
               
chr4:51122861-51123220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
43, 11
               

               
Conread position:
               
12-365
               

               
Cow position:
               
chr4:56570608-56570962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 272
               

               
Conread position:
               
12-366
               

               
Cow position:
               
chr4:22860902-22860555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
107, 38
               

               
Conread position:
               
12-366
               

               
Cow position:
               
chr4:31859065-31859440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
33, 154
               

               
Conread position:
               
12-370
               

               
Cow position:
               
chr4:15904902-15905283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 70
               

               
Conread position:
               
12-370
               

               
Cow position:
               
chr4:34209830-34210214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
29, 204
               

               
Conread position:
               
12-371
               

               
Cow position:
               
chr4:3340755-3341133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
41, 72
               

               
Conread position:
               
12-371
               

               
Cow position:
               
chr4:22010255-22009884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
42, 226
               

               
Conread position:
               
12-371
               

               
Cow position:
               
chr4:33971092-33970726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
30, 76
               

               
Conread position:
               
12-371
               

               
Cow position:
               
chr4:42423998-42423628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
29, 82
               

               
Conread position:
               
12-372
               

               
Cow position:
               
chr4:10472027-10472394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
43, 72
               

               
Conread position:
               
12-372
               

               
Cow position:
               
chr4:10999900-10999528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 79
               

               
Conread position:
               
12-372
               

               
Cow position:
               
chr4:12127839-12127460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 153
               

               
Conread position:
               
12-372
               

               
Cow position:
               
chr4:19435064-19435428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
51, 77
               

               
Conread position:
               
12-372
               

               
Cow position:
               
chr4:23647039-23646691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 79
               

               
Conread position:
               
12-372
               

               
Cow position:
               
chr4:26323536-26323923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 85
               

               
Conread position:
               
12-372
               

               
Cow position:
               
chr4:26659108-26659479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
43, 78
               

               
Conread position:
               
12-372
               

               
Cow position:
               
chr4:31004601-31004233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 76
               

               
Conread position:
               
12-372
               

               
Cow position:
               
chr4:31348390-31348021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
42, 92
               

               
Conread position:
               
12-372
               

               
Cow position:
               
chr4:34166171-34165807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
41, 23
               

               
Conread position:
               
12-372
               

               
Cow position:
               
chr4:38944461-38944079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
33, 224
               

               
Conread position:
               
12-372
               

               
Cow position:
               
chr4:43148207-43148594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
12-372
               

               
Cow position:
               
chr4:56240041-56239685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 39
               

               
Conread position:
               
12-372
               

               
Cow position:
               
chr4:68764319-68764698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 216
               

               
Conread position:
               
12-373
               

               
Cow position:
               
chr4:45775538-45775150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 44
               

               
Conread position:
               
12-373
               

               
Cow position:
               
chr4:46550188-46550569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
33, 82
               

               
Conread position:
               
12-375
               

               
Cow position:
               
chr4:5610271-5609909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 82
               

               
Conread position:
               
12-375
               

               
Cow position:
               
chr4:12676616-12676977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 20
               

               
Conread position:
               
12-375
               

               
Cow position:
               
chr4:17774546-17774183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
43, 6
               

               
Conread position:
               
12-375
               

               
Cow position:
               
chr4:51898807-51899203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
28, 84
               

               
Conread position:
               
12-375
               

               
Cow position:
               
chr4:63349670-63349293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 144
               

               
Conread position:
               
12-377
               

               
Cow position:
               
chr4:11187263-11187636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 35
               

               
Conread position:
               
12-378
               

               
Cow position:
               
chr4:203342-202958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 82
               

               
Conread position:
               
12-378
               

               
Cow position:
               
chr4:3687732-3688114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
42, 30
               

               
Conread position:
               
12-378
               

               
Cow position:
               
chr4:12034067-12034455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
66, 35
               

               
Conread position:
               
12-378
               

               
Cow position:
               
chr4:13284180-13284569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
12-378
               

               
Cow position:
               
chr4:13589894-13590272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 69
               

               
Conread position:
               
12-378
               

               
Cow position:
               
chr4:14414542-14414169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
42, 85
               

               
Conread position:
               
12-378
               

               
Cow position:
               
chr4:15635640-15635266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
113, 41
               

               
Conread position:
               
12-378
               

               
Cow position:
               
chr4:15871919-15871556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
26, 153
               

               
Conread position:
               
12-378
               

               
Cow position:
               
chr4:16762928-16762534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
12-378
               

               
Cow position:
               
chr4:19408196-19407806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
41, 78
               

               
Conread position:
               
12-378
               

               
Cow position:
               
chr4:19584508-19584899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 222
               

               
Conread position:
               
12-378
               

               
Cow position:
               
chr4:19708745-19709128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 98
               

               
Conread position:
               
12-378
               

               
Cow position:
               
chr4:19744685-19745055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
20, 82
               

               
Conread position:
               
12-378
               

               
Cow position:
               
chr4:25197694-25197305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 143
               

               
Conread position:
               
12-378
               

               
Cow position:
               
chr4:27529917-27530297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
33, 82
               

               
Conread position:
               
12-378
               

               
Cow position:
               
chr4:30574260-30574646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
103, 20
               

               
Conread position:
               
12-378
               

               
Cow position:
               
chr4:30974140-30974519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 82
               

               
Conread position:
               
12-378
               

               
Cow position:
               
chr4:31506227-31505833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
43, 18
               

               
Conread position:
               
12-378
               

               
Cow position:
               
chr4:34310651-34310280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 83
               

               
Conread position:
               
12-378
               

               
Cow position:
               
chr4:34630705-34631092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 23
               

               
Conread position:
               
12-378
               

               
Cow position:
               
chr4:35981793-35982183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
28, 82
               

               
Conread position:
               
12-378
               

               
Cow position:
               
chr4:44496188-44496547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 35
               

               
Conread position:
               
12-378
               

               
Cow position:
               
chr4:44612806-44613190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
12-378
               

               
Cow position:
               
chr4:48152564-48152187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
33, 81
               

               
Conread position:
               
12-378
               

               
Cow position:
               
chr4:52748654-52748277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 78
               

               
Conread position:
               
12-378
               

               
Cow position:
               
chr4:56590834-56591227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 228
               

               
Conread position:
               
12-379
               

               
Cow position:
               
chr4:12591407-12591033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 303
               

               
Conread position:
               
12-380
               

               
Cow position:
               
chr4:29106703-29107098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
39, 156
               

               
Conread position:
               
12-381
               

               
Cow position:
               
chr4:21064842-21065213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 61
               

               
Conread position:
               
12-381
               

               
Cow position:
               
chr4:31136560-31136943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
100, 36
               

               
Conread position:
               
12-381
               

               
Cow position:
               
chr4:48485804-48486184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
28, 112
               

               
Conread position:
               
12-381
               

               
Cow position:
               
chr4:66172994-66172607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
14, 22
               

               
Conread position:
               
12-382
               

               
Cow position:
               
chr4:4321202-4320804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 183
               

               
Conread position:
               
12-382
               

               
Cow position:
               
chr4:19597512-19597143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 72
               

               
Conread position:
               
12-382
               

               
Cow position:
               
chr4:38935162-38935547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 78
               

               
Conread position:
               
12-382
               

               
Cow position:
               
chr4:45589787-45589406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
116, 21
               

               
Conread position:
               
12-383
               

               
Cow position:
               
chr4:1026425-1026048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
30, 75
               

               
Conread position:
               
12-386
               

               
Cow position:
               
chr4:23445249-23444845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
12-386
               

               
Cow position:
               
chr4:46526804-46527197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
113, 40
               

               
Conread position:
               
12-390
               

               
Cow position:
               
chr4:3837083-3837464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 71
               

               
Conread position:
               
12-390
               

               
Cow position:
               
chr4:9444887-9444480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
12-390
               

               
Cow position:
               
chr4:10732022-10732413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 83
               

               
Conread position:
               
12-390
               

               
Cow position:
               
chr4:13327154-13326753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 85
               

               
Conread position:
               
12-390
               

               
Cow position:
               
chr4:25369920-25370291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 18
               

               
Conread position:
               
12-390
               

               
Cow position:
               
chr4:40823311-40822933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
44, 80
               

               
Conread position:
               
12-390
               

               
Cow position:
               
chr4:43895001-43894612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 41
               

               
Conread position:
               
12-390
               

               
Cow position:
               
chr4:60897469-60897095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
104, 69
               

               
Conread position:
               
12-391
               

               
Cow position:
               
chr4:23509392-23509790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 83
               

               
Conread position:
               
12-391
               

               
Cow position:
               
chr4:27276737-27276347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 44
               

               
Conread position:
               
12-396
               

               
Cow position:
               
chr4:25354358-25354731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
259, 31
               

               
Conread position:
               
12-396
               

               
Cow position:
               
chr4:49794483-49794853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 18
               

               
Conread position:
               
12-396
               

               
Cow position:
               
chr4:51851000-51851418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
23, 314
               

               
Conread position:
               
12-398
               

               
Cow position:
               
chr4:23847247-23846848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 81
               

               
Conread position:
               
12-398
               

               
Cow position:
               
chr4:41867248-41867653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 72
               

               
Conread position:
               
12-399
               

               
Cow position:
               
chr4:68076727-68076333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
33, 73
               

               
Conread position:
               
12-400
               

               
Cow position:
               
chr4:62983750-62983351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
29, 82
               

               
Conread position:
               
12-403
               

               
Cow position:
               
chr4:11099865-11099449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
44, 349
               

               
Conread position:
               
12-405
               

               
Cow position:
               
chr4:51903406-51903822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
38, 359
               

               
Conread position:
               
12-406
               

               
Cow position:
               
chr4:9795567-9795168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
42, 30
               

               
Conread position:
               
12-407
               

               
Cow position:
               
chr4:22138432-22138000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 76
               

               
Conread position:
               
12-407
               

               
Cow position:
               
chr4:25356502-25356116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
58, 69
               

               
Conread position:
               
12-407
               

               
Cow position:
               
chr4:29384415-29384029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 69
               

               
Conread position:
               
12-407
               

               
Cow position:
               
chr4:58248211-58248619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 61
               

               
Conread position:
               
12-408
               

               
Cow position:
               
chr4:31023245-31023659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 90
               

               
Conread position:
               
12-408
               

               
Cow position:
               
chr4:61897735-61897340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
21, 81
               

               
Conread position:
               
12-410
               

               
Cow position:
               
chr4:28839429-28839826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
42, 70
               

               
Conread position:
               
12-412
               

               
Cow position:
               
chr4:21259020-21259422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
41, 197
               

               
Conread position:
               
12-413
               

               
Cow position:
               
chr4:40414827-40414408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 8
               

               
Conread position:
               
12-414
               

               
Cow position:
               
chr4:1014871-1015289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
53, 79
               

               
Conread position:
               
12-414
               

               
Cow position:
               
chr4:43515526-43515947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
33, 85
               

               
Conread position:
               
12-420
               

               
Cow position:
               
chr4:54190898-54191326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 26
               

               
Conread position:
               
12-421
               

               
Cow position:
               
chr4:18974236-18974653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 115
               

               
Conread position:
               
12-441
               

               
Cow position:
               
chr4:657014-656569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
34, 74
               

               
Conread position:
               
12-502
               

               
Cow position:
               
chr4:59785121-59785616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 79
               

               
Conread position:
               
13-241
               

               
Cow position:
               
chr4:24688541-24688302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
13-279
               

               
Cow position:
               
chr4:28543796-28543535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
43, 78
               

               
Conread position:
               
13-319
               

               
Cow position:
               
chr4:69406173-69406474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
35, 80
               

               
Conread position:
               
13-353
               

               
Cow position:
               
chr4:63965185-63964834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
43, 80
               

               
Conread position:
               
13-359
               

               
Cow position:
               
chr4:28836331-28836703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
13-362
               

               
Cow position:
               
chr4:17052793-17052417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
106, 34
               

               
Conread position:
               
13-372
               

               
Cow position:
               
chr4:51727877-51728253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
36, 311
               

               
Conread position:
               
13-375
               

               
Cow position:
               
chr4:4084641-4084275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 75
               

               
Conread position:
               
13-377
               

               
Cow position:
               
chr4:48321833-48322221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 25
               

               
Conread position:
               
13-378
               

               
Cow position:
               
chr4:10916037-10915647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
31, 83
               

               
Conread position:
               
13-378
               

               
Cow position:
               
chr4:37342922-37343305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
68, 39
               

               
Conread position:
               
13-378
               

               
Cow position:
               
chr4:49158978-49158607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
34, 16
               

               
Conread position:
               
13-381
               

               
Cow position:
               
chr4:19541931-19542338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
32, 88
               

               
Conread position:
               
13-383
               

               
Cow position:
               
chr4:68233783-68234153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
41, 51
               

               
Conread position:
               
13-400
               

               
Cow position:
               
chr4:11897494-11897095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 78
               

               
Conread position:
               
13-406
               

               
Cow position:
               
chr4:68805832-68806213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
36, 82
               

               
Conread position:
               
13-410
               

               
Cow position:
               
chr4:47730667-47731081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
93, 39
               

               
Conread position:
               
14-185
               

               
Cow position:
               
chr4:11090881-11090715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
42, 21
               

               
Conread position:
               
14-257
               

               
Cow position:
               
chr4:21371200-21371450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
40, 27
               

               
Conread position:
               
14-258
               

               
Cow position:
               
chr4:44676002-44676253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
41, 78
               

               
Conread position:
               
14-268
               

               
Cow position:
               
chr4:21233065-21232804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
41, 10
               

               
Conread position:
               
14-269
               

               
Cow position:
               
chr4:3850358-3850622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
29, 80
               

               
Conread position:
               
14-308
               

               
Cow position:
               
chr4:16593889-16594200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 79
               

               
Conread position:
               
14-310
               

               
Cow position:
               
chr4:47348637-47348944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
107, 39
               

               
Conread position:
               
14-318
               

               
Cow position:
               
chr4:26400762-26401082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 162
               

               
Conread position:
               
14-318
               

               
Cow position:
               
chr4:51783987-51784306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 67
               

               
Conread position:
               
14-319
               

               
Cow position:
               
chr4:19322273-19321951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 39
               

               
Conread position:
               
14-319
               

               
Cow position:
               
chr4:45367539-45367868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
14-319
               

               
Cow position:
               
chr4:46591465-46591795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 84
               

               
Conread position:
               
14-363
               

               
Cow position:
               
chr4:12004029-12004387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 153
               

               
Conread position:
               
14-369
               

               
Cow position:
               
chr4:36929119-36929471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 82
               

               
Conread position:
               
14-372
               

               
Cow position:
               
chr4:10034710-10035083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
31, 53
               

               
Conread position:
               
14-372
               

               
Cow position:
               
chr4:13693872-13693495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
41, 80
               

               
Conread position:
               
14-372
               

               
Cow position:
               
chr4:19699909-19700286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
31, 6
               

               
Conread position:
               
14-372
               

               
Cow position:
               
chr4:20327910-20327544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
27, 82
               

               
Conread position:
               
14-372
               

               
Cow position:
               
chr4:43740327-43740710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
38, 161
               

               
Conread position:
               
14-375
               

               
Cow position:
               
chr4:12560842-12561201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
86, 36
               

               
Conread position:
               
14-378
               

               
Cow position:
               
chr4:23451290-23450905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
14-378
               

               
Cow position:
               
chr4:27664811-27665202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
24, 191
               

               
Conread position:
               
14-378
               

               
Cow position:
               
chr4:46060752-46061133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 8
               

               
Conread position:
               
14-380
               

               
Cow position:
               
chr4:34641923-34641535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 60
               

               
Conread position:
               
14-381
               

               
Cow position:
               
chr4:19316194-19315819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 32
               

               
Conread position:
               
14-398
               

               
Cow position:
               
chr4:19313810-19314193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 276
               

               
Conread position:
               
14-402
               

               
Cow position:
               
chr4:9681107-9681498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
21, 275
               

               
Conread position:
               
14-405
               

               
Cow position:
               
chr4:42672977-42673390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
31, 82
               

               
Conread position:
               
14-412
               

               
Cow position:
               
chr4:59871299-59871702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 16
               

               
Conread position:
               
14-413
               

               
Cow position:
               
chr4:16239331-16238952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
254, 42
               

               
Conread position:
               
15-233
               

               
Cow position:
               
chr4:19423191-19423415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
30, 82
               

               
Conread position:
               
15-310
               

               
Cow position:
               
chr4:62772127-62771805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
30, 84
               

               
Conread position:
               
15-396
               

               
Cow position:
               
chr4:3283641-3283247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 49
               

               
Conread position:
               
16-210
               

               
Cow position:
               
chr4:34924885-34924678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
29, 79
               

               
Conread position:
               
16-214
               

               
Cow position:
               
chr4:33869468-33869673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
26, 77
               

               
Conread position:
               
16-269
               

               
Cow position:
               
chr4:22249638-22249379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
39, 78
               

               
Conread position:
               
16-270
               

               
Cow position:
               
chr4:6208276-6208533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
91, 27
               

               
Conread position:
               
16-270
               

               
Cow position:
               
chr4:10992395-10992130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
28, 209
               

               
Conread position:
               
16-270
               

               
Cow position:
               
chr4:13406514-13406780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
28, 80
               

               
Conread position:
               
16-270
               

               
Cow position:
               
chr4:22528580-22528316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
39, 220
               

               
Conread position:
               
16-275
               

               
Cow position:
               
chr4:8597886-8597617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
29, 98
               

               
Conread position:
               
16-278
               

               
Cow position:
               
chr4:44451338-44451597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
52, 40
               

               
Conread position:
               
16-317
               

               
Cow position:
               
chr4:41602656-41602964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 77
               

               
Conread position:
               
16-378
               

               
Cow position:
               
chr4:13344354-13344721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 75
               

               
Conread position:
               
16-392
               

               
Cow position:
               
chr4:570607-570988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
71, 12
               

               
Conread position:
               
17-196
               

               
Cow position:
               
chr4:65891797-65891990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
17-198
               

               
Cow position:
               
chr4:19561500-19561680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
105, 17
               

               
Conread position:
               
17-219
               

               
Cow position:
               
chr4:54851302-54851097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
109, 13
               

               
Conread position:
               
17-248
               

               
Cow position:
               
chr4:243034-243281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
38, 76
               

               
Conread position:
               
17-305
               

               
Cow position:
               
chr4:65175334-65175030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 78
               

               
Conread position:
               
17-343
               

               
Cow position:
               
chr4:13255899-13256224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
40, 73
               

               
Conread position:
               
18-312
               

               
Cow position:
               
chr4:3990807-3990518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
105, 17
               

               
Conread position:
               
18-338
               

               
Cow position:
               
chr4:41186091-41185773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
103, 38
               

               
Conread position:
               
18-356
               

               
Cow position:
               
chr4:64130-63774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
13, 61
               

               
Conread position:
               
18-365
               

               
Cow position:
               
chr4:1060454-1060108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
38, 18
               

               
Conread position:
               
18-366
               

               
Cow position:
               
chr4:17201076-17201428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
27, 78
               

               
Conread position:
               
18-366
               

               
Cow position:
               
chr4:29238233-29237868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
27, 156
               

               
Conread position:
               
18-366
               

               
Cow position:
               
chr4:46393249-46393613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
68, 14
               

               
Conread position:
               
18-378
               

               
Cow position:
               
chr4:55270951-55270581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
27, 145
               

               
Conread position:
               
18-389
               

               
Cow position:
               
chr4:13222366-13221984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 40
               

               
Conread position:
               
18-390
               

               
Cow position:
               
chr4:46258295-46258697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
45, 73
               

               
Conread position:
               
18-402
               

               
Cow position:
               
chr4:62317249-62317659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
28, 78
               

               
Conread position:
               
20-270
               

               
Cow position:
               
chr4:35870027-35870277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
35, 15
               

               
Conread position:
               
20-270
               

               
Cow position:
               
chr4:65431954-65432222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
20-297
               

               
Cow position:
               
chr4:1495593-1495303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
32, 191
               

               
Conread position:
               
20-298
               

               
Cow position:
               
chr4:17379011-17378740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
17, 70
               

               
Conread position:
               
20-372
               

               
Cow position:
               
chr4:61389262-61388889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
29, 71
               

               
Conread position:
               
20-378
               

               
Cow position:
               
chr4:4185932-4186302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
20, 81
               

               
Conread position:
               
20-383
               

               
Cow position:
               
chr4:7704504-7704126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 39
               

               
Conread position:
               
20-413
               

               
Cow position:
               
chr4:22907336-22907719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
164, 10
               

               
Conread position:
               
21-212
               

               
Cow position:
               
chr4:52632162-52631950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
21-259
               

               
Cow position:
               
chr4:22741599-22741359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
34, 69
               

               
Conread position:
               
21-372
               

               
Cow position:
               
chr4:8769919-8770273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
30, 153
               

               
Conread position:
               
22-168
               

               
Cow position:
               
chr4:22744140-22744286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
33, 10
               

               
Conread position:
               
22-399
               

               
Cow position:
               
chr4:32260041-32259633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 97
               

               
Conread position:
               
23-378
               

               
Cow position:
               
chr4:22073505-22073132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
22, 65
               

               
Conread position:
               
24-257
               

               
Cow position:
               
chr4:51866815-51867051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
51, 65
               

               
Conread position:
               
24-305
               

               
Cow position:
               
chr4:61148405-61148730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
21, 246
               

               
Conread position:
               
24-314
               

               
Cow position:
               
chr4:48961668-48961364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
21, 70
               

               
Conread position:
               
24-328
               

               
Cow position:
               
chr4:14944875-14945188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
32, 67
               

               
Conread position:
               
25-237
               

               
Cow position:
               
chr4:60371008-60370787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
104, 8
               

               
Conread position:
               
25-244
               

               
Cow position:
               
chr4:32249434-32249214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
30, 5
               

               
Conread position:
               
25-248
               

               
Cow position:
               
chr4:33421540-33421316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
55, 5
               

               
Conread position:
               
25-250
               

               
Cow position:
               
chr4:67444965-67445197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
39, 5
               

               
Conread position:
               
25-264
               

               
Cow position:
               
chr4:11272275-11272027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
39, 5
               

               
Conread position:
               
25-332
               

               
Cow position:
               
chr4:48143642-48143968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
19, 272
               

               
Conread position:
               
25-378
               

               
Cow position:
               
chr4:7964838-7964462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
31, 5
               

               
Conread position:
               
25-406
               

               
Cow position:
               
chr4:34369636-34369246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 15
               

               
Conread position:
               
26-234
               

               
Cow position:
               
chr4:21517187-21516967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
21, 65
               

               
Conread position:
               
26-368
               

               
Cow position:
               
chr4:5756240-5756606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
41, 65
               

               
Conread position:
               
29-270
               

               
Cow position:
               
chr4:54930604-54930350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
15, 212
               

               
Conread position:
               
30-211
               

               
Cow position:
               
chr4:22849893-22849703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
23, 61
               

               
Conread position:
               
30-266
               

               
Cow position:
               
chr4:47351629-47351871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
30-268
               

               
Cow position:
               
chr4:44956364-44956110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
37, 64
               

               
Conread position:
               
30-314
               

               
Cow position:
               
chr4:46597199-46597490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
26, 201
               

               
Conread position:
               
30-328
               

               
Cow position:
               
chr4:65815875-65815571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
21, 59
               

               
Conread position:
               
30-331
               

               
Cow position:
               
chr4:7847443-7847139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
38, 60
               

               
Conread position:
               
30-340
               

               
Cow position:
               
chr4:63262350-63262055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
30, 60
               

               
Conread position:
               
30-346
               

               
Cow position:
               
chr4:45662683-45662355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 49
               

               
Conread position:
               
30-365
               

               
Cow position:
               
chr4:13142715-13142408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
30-367
               

               
Cow position:
               
chr4:34383524-34383165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 9
               

               
Conread position:
               
30-371
               

               
Cow position:
               
chr4:22713669-22713317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
26, 61
               

               
Conread position:
               
30-374
               

               
Cow position:
               
chr4:59056026-59055690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
133, 28
               

               
Conread position:
               
30-378
               

               
Cow position:
               
chr4:32459040-32458671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 129
               

               
Conread position:
               
30-378
               

               
Cow position:
               
chr4:68944350-68943996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
26, 146
               

               
Conread position:
               
30-381
               

               
Cow position:
               
chr4:45077247-45076891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 26
               

               
Conread position:
               
30-384
               

               
Cow position:
               
chr4:45235037-45234699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
25, 52
               

               
Conread position:
               
30-390
               

               
Cow position:
               
chr4:53208117-53208480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
26, 51
               

               
Conread position:
               
30-405
               

               
Cow position:
               
chr4:509081-508699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 61
               

               
Conread position:
               
31-269
               

               
Cow position:
               
chr4:59372449-59372214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
55, 123
               

               
Conread position:
               
31-313
               

               
Cow position:
               
chr4:33030375-33030660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
24, 89
               

               
Conread position:
               
31-378
               

               
Cow position:
               
chr4:37691490-37691126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
24, 343
               

               
Conread position:
               
32-301
               

               
Cow position:
               
chr4:45952546-45952280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
23, 75
               

               
Conread position:
               
33-192
               

               
Cow position:
               
chr4:61088393-61088555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
23, 49
               

               
Conread position:
               
33-232
               

               
Cow position:
               
chr4:7501696-7501903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
23, 57
               

               
Conread position:
               
33-319
               

               
Cow position:
               
chr4:8947220-8947513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
21, 55
               

               
Conread position:
               
33-375
               

               
Cow position:
               
chr4:20147010-20147367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 50
               

               
Conread position:
               
33-378
               

               
Cow position:
               
chr4:13668801-13668433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 289
               

               
Conread position:
               
34-328
               

               
Cow position:
               
chr4:22724944-22725223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
93, 40
               

               
Conread position:
               
34-357
               

               
Cow position:
               
chr4:40918117-40918466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
52, 22
               

               
Conread position:
               
34-378
               

               
Cow position:
               
chr4:2681173-2681514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
22, 98
               

               
Conread position:
               
34-397
               

               
Cow position:
               
chr4:43909569-43909969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
21, 32
               

               
Conread position:
               
34-405
               

               
Cow position:
               
chr4:45685295-45685667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 9
               

               
Conread position:
               
35-378
               

               
Cow position:
               
chr4:16881536-16881188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 48
               

               
Conread position:
               
35-406
               

               
Cow position:
               
chr4:52823577-52823189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 285
               

               
Conread position:
               
37-355
               

               
Cow position:
               
chr4:805886-806221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
19, 222
               

               
Conread position:
               
38-224
               

               
Cow position:
               
chr4:46720334-46720141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
18, 135
               

               
Conread position:
               
38-266
               

               
Cow position:
               
chr4:20128224-20127991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
14, 100
               

               
Conread position:
               
38-297
               

               
Cow position:
               
chr4:69543008-69543288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
38-383
               

               
Cow position:
               
chr4:22101427-22101071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 129
               

               
Conread position:
               
38-409
               

               
Cow position:
               
chr4:15439411-15439801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
16, 22
               

               
Conread position:
               
39-228
               

               
Cow position:
               
chr4:11154066-11154260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
39-251
               

               
Cow position:
               
chr4:38705939-38705720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
75, 18
               

               
Conread position:
               
39-261
               

               
Cow position:
               
chr4:63119408-63119170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
42, 130
               

               
Conread position:
               
39-306
               

               
Cow position:
               
chr4:395768-396047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
95, 52
               

               
Conread position:
               
39-348
               

               
Cow position:
               
chr4:9925798-9925477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
43, 279
               

               
Conread position:
               
39-358
               

               
Cow position:
               
chr4:22236648-22236313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 50
               

               
Conread position:
               
39-372
               

               
Cow position:
               
chr4:66547936-66547584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 53
               

               
Conread position:
               
39-378
               

               
Cow position:
               
chr4:27632284-27632626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 50
               

               
Conread position:
               
39-380
               

               
Cow position:
               
chr4:41371109-41370753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 41
               

               
Conread position:
               
39-396
               

               
Cow position:
               
chr4:1985474-1985857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
16, 53
               

               
Conread position:
               
39-398
               

               
Cow position:
               
chr4:21089037-21088662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
15, 50
               

               
Conread position:
               
40-387
               

               
Cow position:
               
chr4:29805538-29805175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 191
               

               
Conread position:
               
42-396
               

               
Cow position:
               
chr4:19501250-19500886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 48
               

               
Conread position:
               
43-408
               

               
Cow position:
               
chr4:2099468-2099851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
13, 124
               

               
Conread position:
               
44-206
               

               
Cow position:
               
chr4:69385933-69386095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
70, 12
               

               
Conread position:
               
44-376
               

               
Cow position:
               
chr4:47262370-47262720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
44-380
               

               
Cow position:
               
chr4:33100981-33100620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
20, 312
               

               
Conread position:
               
45-233
               

               
Cow position:
               
chr4:28399577-28399382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
65, 14
               

               
Conread position:
               
45-269
               

               
Cow position:
               
chr4:4843408-4843173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
9, 123
               

               
Conread position:
               
45-296
               

               
Cow position:
               
chr4:47041585-47041332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
9, 116
               

               
Conread position:
               
45-377
               

               
Cow position:
               
chr4:12030683-12031033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
19, 46
               

               
Conread position:
               
48-360
               

               
Cow position:
               
chr4:44449663-44449355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
19, 10
               

               
Conread position:
               
49-318
               

               
Cow position:
               
chr4:65950492-65950780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 272
               

               
Conread position:
               
49-372
               

               
Cow position:
               
chr4:61313364-61313020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 122
               

               
Conread position:
               
50-260
               

               
Cow position:
               
chr4:53346171-53346389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
66, 37
               

               
Conread position:
               
51-366
               

               
Cow position:
               
chr4:14542833-14542503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
35, 134
               

               
Conread position:
               
51-373
               

               
Cow position:
               
chr4:4826972-4827313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
65, 7
               

               
Conread position:
               
52-381
               

               
Cow position:
               
chr4:49629330-49629674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 44
               

               
Conread position:
               
53-319
               

               
Cow position:
               
chr4:59377762-59378038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 34
               

               
Conread position:
               
53-372
               

               
Cow position:
               
chr4:36290476-36290801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
57, 34
               

               
Conread position:
               
53-405
               

               
Cow position:
               
chr4:48104725-48104351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
54, 38
               

               
Conread position:
               
54-268
               

               
Cow position:
               
chr4:51605759-51605543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
106, 35
               

               
Conread position:
               
54-366
               

               
Cow position:
               
chr4:6659967-6659640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
24, 211
               

               
Conread position:
               
55-348
               

               
Cow position:
               
chr4:68889707-68889417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
103, 33
               

               
Conread position:
               
55-407
               

               
Cow position:
               
chr4:33091229-33091588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
80, 36
               

               
Conread position:
               
56-378
               

               
Cow position:
               
chr4:54524479-54524145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
203, 31
               

               
Conread position:
               
56-390
               

               
Cow position:
               
chr4:48409415-48409085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
51, 31
               

               
Conread position:
               
57-378
               

               
Cow position:
               
chr4:45249828-45250158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 31
               

               
Conread position:
               
58-370
               

               
Cow position:
               
chr4:54171475-54171802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
25, 253
               

               
Conread position:
               
58-375
               

               
Cow position:
               
chr4:20027248-20026923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
97, 30
               

               
Conread position:
               
58-388
               

               
Cow position:
               
chr4:36577777-36577416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
65, 29
               

               
Conread position:
               
58-400
               

               
Cow position:
               
chr4:52087788-52088114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
98, 31
               

               
Conread position:
               
59-378
               

               
Cow position:
               
chr4:37732635-37732294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
59-410
               

               
Cow position:
               
chr4:54927586-54927211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
64, 29
               

               
Conread position:
               
63-252
               

               
Cow position:
               
chr4:52307754-52307568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
64-194
               

               
Cow position:
               
chr4:5047479-5047344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
64-356
               

               
Cow position:
               
chr4:37313029-37313333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
65, 23
               

               
Conread position:
               
64-372
               

               
Cow position:
               
chr4:18756292-18756616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
52, 25
               

               
Conread position:
               
65-378
               

               
Cow position:
               
chr4:20184573-20184868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
92, 23
               

               
Conread position:
               
66-390
               

               
Cow position:
               
chr4:54872166-54871826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
48, 22
               

               
Conread position:
               
67-218
               

               
Cow position:
               
chr4:26011714-26011870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
58, 20
               

               
Conread position:
               
67-306
               

               
Cow position:
               
chr4:22196329-22196107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
67-382
               

               
Cow position:
               
chr4:21874036-21874367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
56, 20
               

               
Conread position:
               
69-372
               

               
Cow position:
               
chr4:46529105-46528803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
197, 56
               

               
Conread position:
               
69-375
               

               
Cow position:
               
chr4:14500391-14500065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
49, 257
               

               
Conread position:
               
73-366
               

               
Cow position:
               
chr4:56499013-56498698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
84, 156
               

               
Conread position:
               
75-378
               

               
Cow position:
               
chr4:7043955-7043632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
54, 97
               

               
Conread position:
               
76-264
               

               
Cow position:
               
chr4:18107289-18107094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
43, 146
               

               
Conread position:
               
76-269
               

               
Cow position:
               
chr4:46183279-46183484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
76-378
               

               
Cow position:
               
chr4:11610750-11611049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
35, 14
               

               
Conread position:
               
78-299
               

               
Cow position:
               
chr4:13026171-13026409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
13, 136
               

               
Conread position:
               
78-348
               

               
Cow position:
               
chr4:53125989-53126260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
43, 152
               

               
Conread position:
               
79-378
               

               
Cow position:
               
chr4:47748288-47748599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
37, 166
               

               
Conread position:
               
80-365
               

               
Cow position:
               
chr4:22546964-22546672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 10
               

               
Conread position:
               
80-370
               

               
Cow position:
               
chr4:25226822-25227111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
10, 171
               

               
Conread position:
               
80-378
               

               
Cow position:
               
chr4:59873304-59873611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
43, 226
               

               
Conread position:
               
81-297
               

               
Cow position:
               
chr4:24481790-24481567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
74, 148
               

               
Conread position:
               
81-319
               

               
Cow position:
               
chr4:47280013-47280254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
77, 39
               

               
Conread position:
               
82-321
               

               
Cow position:
               
chr4:48173014-48173265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
37, 65
               

               
Conread position:
               
82-347
               

               
Cow position:
               
chr4:45073939-45074212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
35, 66
               

               
Conread position:
               
82-373
               

               
Cow position:
               
chr4:57584369-57584060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
52, 293
               

               
Conread position:
               
82-377
               

               
Cow position:
               
chr4:26333322-26333016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
15, 221
               

               
Conread position:
               
82-378
               

               
Cow position:
               
chr4:19578278-19578568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
161, 85
               

               
Conread position:
               
82-378
               

               
Cow position:
               
chr4:26335489-26335182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
15, 221
               

               
Conread position:
               
82-378
               

               
Cow position:
               
chr4:45636039-45636357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
20, 262
               

               
Conread position:
               
82-386
               

               
Cow position:
               
chr4:24093261-24092938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
82-400
               

               
Cow position:
               
chr4:55508365-55508053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
39, 25
               

               
Conread position:
               
82-401
               

               
Cow position:
               
chr4:34700163-34699838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
41, 156
               

               
Conread position:
               
83-372
               

               
Cow position:
               
chr4:52779728-52780024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 233
               

               
Conread position:
               
83-378
               

               
Cow position:
               
chr4:63952282-63951979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
70, 42
               

               
Conread position:
               
83-406
               

               
Cow position:
               
chr4:38946084-38946433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 161
               

               
Conread position:
               
84-372
               

               
Cow position:
               
chr4:45837750-45837450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
25, 43
               

               
Conread position:
               
84-378
               

               
Cow position:
               
chr4:12473727-12474036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
85-375
               

               
Cow position:
               
chr4:54767510-54767208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
48, 179
               

               
Conread position:
               
86-406
               

               
Cow position:
               
chr4:5577324-5577003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 294
               

               
Conread position:
               
87-378
               

               
Cow position:
               
chr4:48902738-48902427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
20, 41
               

               
Conread position:
               
89-310
               

               
Cow position:
               
chr4:11380166-11380397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
26, 126
               

               
Conread position:
               
90-285
               

               
Cow position:
               
chr4:51729836-51730037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
90-390
               

               
Cow position:
               
chr4:46494179-46494505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
33, 227
               

               
Conread position:
               
91-378
               

               
Cow position:
               
chr4:10895933-10895643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
128, 76
               

               
Conread position:
               
91-403
               

               
Cow position:
               
chr4:16513636-16513311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
32, 74
               

               
Conread position:
               
92-318
               

               
Cow position:
               
chr4:17084452-17084213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
15, 225
               

               
Conread position:
               
94-395
               

               
Cow position:
               
chr4:19102991-19102675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 13
               

               
Conread position:
               
94-421
               

               
Cow position:
               
chr4:12901667-12901332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 239
               

               
Conread position:
               
95-319
               

               
Cow position:
               
chr4:19098357-19098601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
99-264
               

               
Cow position:
               
chr4:60131120-60131291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
106-339
               

               
Cow position:
               
chr4:45705948-45706191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
15, 118
               

               
Conread position:
               
108-406
               

               
Cow position:
               
chr4:19199386-19199075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
7, 290
               

               
Conread position:
               
111-232
               

               
Cow position:
               
chr4:2537102-2537226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
111-297
               

               
Cow position:
               
chr4:45596120-45595926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
44, 61
               

               
Conread position:
               
111-319
               

               
Cow position:
               
chr4:45013254-45013050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
51, 114
               

               
Conread position:
               
111-320
               

               
Cow position:
               
chr4:64657386-64657173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
43, 117
               

               
Conread position:
               
111-328
               

               
Cow position:
               
chr4:47510300-47510520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
46, 116
               

               
Conread position:
               
111-365
               

               
Cow position:
               
chr4:44773136-44772868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
111-365
               

               
Cow position:
               
chr4:45799784-45800051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
48, 31
               

               
Conread position:
               
111-371
               

               
Cow position:
               
chr4:61066684-61066931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
55, 114
               

               
Conread position:
               
111-376
               

               
Cow position:
               
chr4:32693694-32693971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
47, 204
               

               
Conread position:
               
111-378
               

               
Cow position:
               
chr4:16814302-16814576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
46, 57
               

               
Conread position:
               
111-378
               

               
Cow position:
               
chr4:38822408-38822133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
47, 121
               

               
Conread position:
               
111-378
               

               
Cow position:
               
chr4:41899891-41900151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
148, 39
               

               
Conread position:
               
111-378
               

               
Cow position:
               
chr4:45724785-45725049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
119, 33
               

               
Conread position:
               
111-378
               

               
Cow position:
               
chr4:56005674-56005941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
160, 42
               

               
Conread position:
               
111-379
               

               
Cow position:
               
chr4:54789549-54789829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
111-381
               

               
Cow position:
               
chr4:46136661-46136937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 198
               

               
Conread position:
               
111-382
               

               
Cow position:
               
chr4:65265401-65265099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
49, 84
               

               
Conread position:
               
111-410
               

               
Cow position:
               
chr4:37675525-37675846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
47, 92
               

               
Conread position:
               
112-314
               

               
Cow position:
               
chr4:19323884-19324096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
42, 15
               

               
Conread position:
               
112-378
               

               
Cow position:
               
chr4:44184200-44183935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
45, 80
               

               
Conread position:
               
112-396
               

               
Cow position:
               
chr4:19292631-19292918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 161
               

               
Conread position:
               
113-264
               

               
Cow position:
               
chr4:58282952-58282804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
41, 112
               

               
Conread position:
               
113-378
               

               
Cow position:
               
chr4:63472162-63471905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
39, 161
               

               
Conread position:
               
114-356
               

               
Cow position:
               
chr4:61188957-61188704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
115-266
               

               
Cow position:
               
chr4:45563656-45563810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
43, 71
               

               
Conread position:
               
115-378
               

               
Cow position:
               
chr4:26644650-26644932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
117-319
               

               
Cow position:
               
chr4:1786-1998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
38, 188
               

               
Conread position:
               
120-381
               

               
Cow position:
               
chr4:64040039-64040317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
23, 56
               

               
Conread position:
               
121-326
               

               
Cow position:
               
chr4:29206416-29206625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
36, 187
               

               
Conread position:
               
126-314
               

               
Cow position:
               
chr4:54921163-54920968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
32, 99
               

               
Conread position:
               
126-316
               

               
Cow position:
               
chr4:5964063-5963866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
31, 44
               

               
Conread position:
               
126-348
               

               
Cow position:
               
chr4:20142983-20142748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
32, 118
               

               
Conread position:
               
126-355
               

               
Cow position:
               
chr4:34562304-34562542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
29, 80
               

               
Conread position:
               
126-367
               

               
Cow position:
               
chr4:19430285-19430537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
32, 173
               

               
Conread position:
               
126-379
               

               
Cow position:
               
chr4:59002209-59001951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
145, 34
               

               
Conread position:
               
126-399
               

               
Cow position:
               
chr4:8182715-8182428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
37, 23
               

               
Conread position:
               
126-402
               

               
Cow position:
               
chr4:69290814-69290533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
144, 28
               

               
Conread position:
               
127-268
               

               
Cow position:
               
chr4:21173774-21173915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
27, 44
               

               
Conread position:
               
127-407
               

               
Cow position:
               
chr4:45626697-45626426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
143, 39
               

               
Conread position:
               
127-408
               

               
Cow position:
               
chr4:48422801-48423085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
38, 154
               

               
Conread position:
               
128-356
               

               
Cow position:
               
chr4:20558289-20558526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
128-378
               

               
Cow position:
               
chr4:19573213-19573474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
25, 18
               

               
Conread position:
               
128-378
               

               
Cow position:
               
chr4:49019761-49019513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
83, 34
               

               
Conread position:
               
128-378
               

               
Cow position:
               
chr4:52576289-52576544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
26, 51
               

               
Conread position:
               
128-378
               

               
Cow position:
               
chr4:65549106-65548847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
31, 80
               

               
Conread position:
               
128-384
               

               
Cow position:
               
chr4:62370243-62370500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
28, 178
               

               
Conread position:
               
128-401
               

               
Cow position:
               
chr4:41186461-41186193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
34, 63
               

               
Conread position:
               
128-402
               

               
Cow position:
               
chr4:35834554-35834262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
37, 26
               

               
Conread position:
               
129-381
               

               
Cow position:
               
chr4:68652136-68652399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
130-365
               

               
Cow position:
               
chr4:13608390-13608635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
28, 83
               

               
Conread position:
               
130-378
               

               
Cow position:
               
chr4:2774646-2774908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
108, 33
               

               
Conread position:
               
130-378
               

               
Cow position:
               
chr4:66380414-66380151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
131-384
               

               
Cow position:
               
chr4:26012326-26012603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
31, 131
               

               
Conread position:
               
131-389
               

               
Cow position:
               
chr4:26830632-26830914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
31, 129
               

               
Conread position:
               
132-399
               

               
Cow position:
               
chr4:47038697-47038975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
25, 180
               

               
Conread position:
               
134-353
               

               
Cow position:
               
chr4:49800626-49800855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
22, 95
               

               
Conread position:
               
137-378
               

               
Cow position:
               
chr4:28841350-28841604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
29, 225
               

               
Conread position:
               
137-381
               

               
Cow position:
               
chr4:35638963-35638718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
8, 26
               

               
Conread position:
               
139-397
               

               
Cow position:
               
chr4:17851315-17851056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
18, 140
               

               
Conread position:
               
147-398
               

               
Cow position:
               
chr4:47305023-47305287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
149-391
               

               
Cow position:
               
chr4:67393043-67393293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
120, 18
               

               
Conread position:
               
151-372
               

               
Cow position:
               
chr4:48381334-48381569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
119, 74
               

               
Conread position:
               
152-378
               

               
Cow position:
               
chr4:13131429-13131666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
119, 14
               

               
Conread position:
               
152-399
               

               
Cow position:
               
chr4:60363302-60363558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
19, 97
               

               
Conread position:
               
152-405
               

               
Cow position:
               
chr4:18951927-18952189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
118, 160
               

               
Conread position:
               
153-381
               

               
Cow position:
               
chr4:64029072-64029281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
9, 28
               

               
Conread position:
               
154-313
               

               
Cow position:
               
chr4:15462296-15462128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
66, 9
               

               
Conread position:
               
154-365
               

               
Cow position:
               
chr4:47125893-47125667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
154-366
               

               
Cow position:
               
chr4:46435281-46435506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
28, 21
               

               
Conread position:
               
154-378
               

               
Cow position:
               
chr4:38350244-38350009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
154-397
               

               
Cow position:
               
chr4:14994122-14994380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
156-378
               

               
Cow position:
               
chr4:38977934-38977705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
156-378
               

               
Cow position:
               
chr4:58018302-58018527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
84, 46
               

               
Conread position:
               
156-402
               

               
Cow position:
               
chr4:38210017-38209768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
115, 152
               

               
Conread position:
               
157-384
               

               
Cow position:
               
chr4:14020459-14020690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
123, 70
               

               
Conread position:
               
157-407
               

               
Cow position:
               
chr4:31177785-31178036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
114, 28
               

               
Conread position:
               
159-372
               

               
Cow position:
               
chr4:45588478-45588251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
7, 159
               

               
Conread position:
               
159-378
               

               
Cow position:
               
chr4:27698991-27699225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
21, 7
               

               
Conread position:
               
159-388
               

               
Cow position:
               
chr4:28753591-28753821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
12, 60
               

               
Conread position:
               
160-314
               

               
Cow position:
               
chr4:12135965-12135803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
160-353
               

               
Cow position:
               
chr4:45862378-45862572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
5, 159
               

               
Conread position:
               
160-368
               

               
Cow position:
               
chr4:65885464-65885676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
108, 73
               

               
Conread position:
               
160-378
               

               
Cow position:
               
chr4:20125006-20124783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
87, 148
               

               
Conread position:
               
160-378
               

               
Cow position:
               
chr4:43542509-43542297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
208, 141
               

               
Conread position:
               
160-396
               

               
Cow position:
               
chr4:68490967-68491220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
15, 206
               

               
Conread position:
               
160-402
               

               
Cow position:
               
chr4:7698228-7698475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
109, 83
               

               
Conread position:
               
160-416
               

               
Cow position:
               
chr4:38358859-38358600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
111, 61
               

               
Conread position:
               
161-378
               

               
Cow position:
               
chr4:54391054-54390829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
106, 10
               

               
Conread position:
               
161-405
               

               
Cow position:
               
chr4:40995694-40995946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
119, 66
               

               
Conread position:
               
162-373
               

               
Cow position:
               
chr4:33181508-33181724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
109, 193
               

               
Conread position:
               
162-378
               

               
Cow position:
               
chr4:50687897-50687680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
97, 141
               

               
Conread position:
               
162-406
               

               
Cow position:
               
chr4:42232059-42231822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
108, 64
               

               
Conread position:
               
162-408
               

               
Cow position:
               
chr4:44854326-44854065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
109, 27
               

               
Conread position:
               
163-315
               

               
Cow position:
               
chr4:19256660-19256818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
110, 50
               

               
Conread position:
               
163-318
               

               
Cow position:
               
chr4:51920509-51920672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
163-359
               

               
Cow position:
               
chr4:3268398-3268205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
140, 46
               

               
Conread position:
               
163-371
               

               
Cow position:
               
chr4:28574185-28573986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
52, 102
               

               
Conread position:
               
163-374
               

               
Cow position:
               
chr4:51192932-51193157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
163-378
               

               
Cow position:
               
chr4:3853437-3853664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
53, 15
               

               
Conread position:
               
163-378
               

               
Cow position:
               
chr4:21112602-21112388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
108, 25
               

               
Conread position:
               
163-378
               

               
Cow position:
               
chr4:26960004-26959781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
28, 23
               

               
Conread position:
               
163-399
               

               
Cow position:
               
chr4:19431731-19431484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
107, 179
               

               
Conread position:
               
163-403
               

               
Cow position:
               
chr4:32561794-32562043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
108, 136
               

               
Conread position:
               
163-406
               

               
Cow position:
               
chr4:1646127-1645871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
108, 231
               

               
Conread position:
               
164-372
               

               
Cow position:
               
chr4:34653903-34653696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
204, 126
               

               
Conread position:
               
164-372
               

               
Cow position:
               
chr4:46883707-46883488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
164-375
               

               
Cow position:
               
chr4:45910011-45909778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
164-405
               

               
Cow position:
               
chr4:68391514-68391277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
106, 22
               

               
Conread position:
               
165-379
               

               
Cow position:
               
chr4:15236603-15236810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
203, 56
               

               
Conread position:
               
166-319
               

               
Cow position:
               
chr4:10958705-10958869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
167-377
               

               
Cow position:
               
chr4:54937047-54937278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
22, 5
               

               
Conread position:
               
167-378
               

               
Cow position:
               
chr4:6094097-6093879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
167-378
               

               
Cow position:
               
chr4:45874497-45874278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
102, 186
               

               
Conread position:
               
169-398
               

               
Cow position:
               
chr4:38949566-38949322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
169-420
               

               
Cow position:
               
chr4:42080730-42080481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
96, 19
               

               
Conread position:
               
170-372
               

               
Cow position:
               
chr4:50837673-50837882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
48, 42
               

               
Conread position:
               
171-310
               

               
Cow position:
               
chr4:61345992-61346136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
171-372
               

               
Cow position:
               
chr4:19539264-19539053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
171-375
               

               
Cow position:
               
chr4:46560153-46560361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
117, 87
               

               
Conread position:
               
171-378
               

               
Cow position:
               
chr4:21161078-21161290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
100, 135
               

               
Conread position:
               
171-378
               

               
Cow position:
               
chr4:51986606-51986389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
171-403
               

               
Cow position:
               
chr4:6073076-6072841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
78, 23
               

               
Conread position:
               
172-310
               

               
Cow position:
               
chr4:46702684-46702540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
98, 128
               

               
Conread position:
               
172-316
               

               
Cow position:
               
chr4:19456713-19456563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
97, 129
               

               
Conread position:
               
173-406
               

               
Cow position:
               
chr4:56745966-56746208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
98, 30
               

               
Conread position:
               
174-324
               

               
Cow position:
               
chr4:32272997-32272840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
12, 6
               

               
Conread position:
               
174-355
               

               
Cow position:
               
chr4:44786018-44786199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
112, 134
               

               
Conread position:
               
174-378
               

               
Cow position:
               
chr4:13918957-13919164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
95, 47
               

               
Conread position:
               
175-372
               

               
Cow position:
               
chr4:61608988-61608789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
93, 133
               

               
Conread position:
               
175-378
               

               
Cow position:
               
chr4:27521530-27521745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
96, 55
               

               
Conread position:
               
175-378
               

               
Cow position:
               
chr4:48127542-48127760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
96, 84
               

               
Conread position:
               
176-426
               

               
Cow position:
               
chr4:43916266-43916520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
94, 134
               

               
Conread position:
               
177-376
               

               
Cow position:
               
chr4:44681275-44681077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
20, 135
               

               
Conread position:
               
177-378
               

               
Cow position:
               
chr4:3299818-3299613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
51, 124
               

               
Conread position:
               
178-378
               

               
Cow position:
               
chr4:617398-617192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
90, 48
               

               
Conread position:
               
178-378
               

               
Cow position:
               
chr4:60527160-60527366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
93, 123
               

               
Conread position:
               
178-381
               

               
Cow position:
               
chr4:10558516-10558724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
87, 135
               

               
Conread position:
               
182-362
               

               
Cow position:
               
chr4:53819702-53819516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
87, 126
               

               
Conread position:
               
182-381
               

               
Cow position:
               
chr4:45840384-45840580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
120, 12
               

               
Conread position:
               
182-382
               

               
Cow position:
               
chr4:14512574-14512363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
183-398
               

               
Cow position:
               
chr4:19496479-19496704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
88, 208
               

               
Conread position:
               
185-366
               

               
Cow position:
               
chr4:54881088-54880902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
84, 36
               

               
Conread position:
               
186-356
               

               
Cow position:
               
chr4:1236885-1236700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
186-366
               

               
Cow position:
               
chr4:50368397-50368584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
85, 151
               

               
Conread position:
               
186-398
               

               
Cow position:
               
chr4:8083811-8083605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
25, 104
               

               
Conread position:
               
188-378
               

               
Cow position:
               
chr4:17790302-17790111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
83, 120
               

               
Conread position:
               
189-372
               

               
Cow position:
               
chr4:48693586-48693774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
31, 120
               

               
Conread position:
               
189-378
               

               
Cow position:
               
chr4:60955322-60955506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
189-378
               

               
Cow position:
               
chr4:63078213-63078411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
189-382
               

               
Cow position:
               
chr4:4647390-4647589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
82, 156
               

               
Conread position:
               
191-319
               

               
Cow position:
               
chr4:14778718-14778590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
191-355
               

               
Cow position:
               
chr4:42277991-42277824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
58, 49
               

               
Conread position:
               
191-375
               

               
Cow position:
               
chr4:27511537-27511730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
191-376
               

               
Cow position:
               
chr4:42347477-42347670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
192-378
               

               
Cow position:
               
chr4:16091322-16091132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
192-378
               

               
Cow position:
               
chr4:23059862-23059667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
192-378
               

               
Cow position:
               
chr4:45963877-45964075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
192-398
               

               
Cow position:
               
chr4:47231004-47230791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
78, 116
               

               
Conread position:
               
192-398
               

               
Cow position:
               
chr4:47284019-47283806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
78, 116
               

               
Conread position:
               
192-408
               

               
Cow position:
               
chr4:37985726-37985948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
72, 111
               

               
Conread position:
               
193-378
               

               
Cow position:
               
chr4:56410340-56410530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
77, 107
               

               
Conread position:
               
193-413
               

               
Cow position:
               
chr4:42374162-42373932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
6, 106
               

               
Conread position:
               
194-367
               

               
Cow position:
               
chr4:61969729-61969552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
76, 12
               

               
Conread position:
               
194-376
               

               
Cow position:
               
chr4:19542931-19543126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
194-390
               

               
Cow position:
               
chr4:348429-348230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
77, 114
               

               
Conread position:
               
194-409
               

               
Cow position:
               
chr4:55694174-55694388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
76, 27
               

               
Conread position:
               
195-378
               

               
Cow position:
               
chr4:51083342-51083155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
11, 113
               

               
Conread position:
               
195-378
               

               
Cow position:
               
chr4:53347973-53347796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
76, 35
               

               
Conread position:
               
195-402
               

               
Cow position:
               
chr4:9269890-9269689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
173, 31
               

               
Conread position:
               
196-370
               

               
Cow position:
               
chr4:35291018-35291200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
196-400
               

               
Cow position:
               
chr4:30769033-30769241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
75, 58
               

               
Conread position:
               
196-406
               

               
Cow position:
               
chr4:5790642-5790859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
75, 9
               

               
Conread position:
               
196-411
               

               
Cow position:
               
chr4:11506785-11506569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
73, 98
               

               
Conread position:
               
197-406
               

               
Cow position:
               
chr4:22849493-22849288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
18, 42
               

               
Conread position:
               
199-408
               

               
Cow position:
               
chr4:45801516-45801729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
21, 31
               

               
Conread position:
               
199-409
               

               
Cow position:
               
chr4:39010049-39010271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
199-409
               

               
Cow position:
               
chr4:46656130-46656351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
72, 191
               

               
Conread position:
               
199-410
               

               
Cow position:
               
chr4:45483799-45484020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
72, 204
               

               
Conread position:
               
200-410
               

               
Cow position:
               
chr4:61887638-61887862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
20, 28
               

               
Conread position:
               
202-379
               

               
Cow position:
               
chr4:68159454-68159276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
73, 92
               

               
Conread position:
               
202-398
               

               
Cow position:
               
chr4:20164689-20164497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
107, 60
               

               
Conread position:
               
202-422
               

               
Cow position:
               
chr4:61999198-61998974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
34, 110
               

               
Conread position:
               
204-368
               

               
Cow position:
               
chr4:2713855-2713683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
204-372
               

               
Cow position:
               
chr4:46668982-46669162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
66, 137
               

               
Conread position:
               
204-377
               

               
Cow position:
               
chr4:63261476-63261657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
204-420
               

               
Cow position:
               
chr4:59015595-59015804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
80, 7
               

               
Conread position:
               
205-372
               

               
Cow position:
               
chr4:29247194-29247021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
66, 164
               

               
Conread position:
               
205-378
               

               
Cow position:
               
chr4:23985118-23984933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
205-378
               

               
Cow position:
               
chr4:30691011-30691187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
79, 27
               

               
Conread position:
               
206-376
               

               
Cow position:
               
chr4:24356518-24356689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
53, 90
               

               
Conread position:
               
206-378
               

               
Cow position:
               
chr4:58045627-58045447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
65, 29
               

               
Conread position:
               
206-382
               

               
Cow position:
               
chr4:42044967-42044786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
64, 102
               

               
Conread position:
               
206-398
               

               
Cow position:
               
chr4:5250195-5250399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
206-406
               

               
Cow position:
               
chr4:56236544-56236341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
65, 112
               

               
Conread position:
               
207-362
               

               
Cow position:
               
chr4:68808100-68807937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
208-378
               

               
Cow position:
               
chr4:2628539-2628715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
64, 11
               

               
Conread position:
               
209-378
               

               
Cow position:
               
chr4:46235149-46234977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
210-351
               

               
Cow position:
               
chr4:48227676-48227532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
59, 98
               

               
Conread position:
               
210-360
               

               
Cow position:
               
chr4:47417426-47417582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
57, 9
               

               
Conread position:
               
210-372
               

               
Cow position:
               
chr4:5628-5778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
158, 62
               

               
Conread position:
               
210-372
               

               
Cow position:
               
chr4:33388868-33389041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
210-383
               

               
Cow position:
               
chr4:29842838-29843009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
74, 92
               

               
Conread position:
               
210-405
               

               
Cow position:
               
chr4:25802702-25802903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
59, 179
               

               
Conread position:
               
210-408
               

               
Cow position:
               
chr4:60761657-60761859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
89, 36
               

               
Conread position:
               
213-348
               

               
Cow position:
               
chr4:22051101-22050958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
213-378
               

               
Cow position:
               
chr4:11185978-11186152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
213-398
               

               
Cow position:
               
chr4:11154283-11154479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
213-399
               

               
Cow position:
               
chr4:22482337-22482526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
14, 62
               

               
Conread position:
               
213-408
               

               
Cow position:
               
chr4:23271297-23271501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
58, 102
               

               
Conread position:
               
213-409
               

               
Cow position:
               
chr4:36876843-36876636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
44, 86
               

               
Conread position:
               
215-378
               

               
Cow position:
               
chr4:41098952-41099119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
54, 133
               

               
Conread position:
               
216-381
               

               
Cow position:
               
chr4:8352547-8352375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
53, 84
               

               
Conread position:
               
217-381
               

               
Cow position:
               
chr4:51617980-51617808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
218-405
               

               
Cow position:
               
chr4:40392835-40393022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
52, 92
               

               
Conread position:
               
218-406
               

               
Cow position:
               
chr4:43579393-43579204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
52, 90
               

               
Conread position:
               
219-366
               

               
Cow position:
               
chr4:39091907-39092056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
52, 89
               

               
Conread position:
               
223-381
               

               
Cow position:
               
chr4:19420732-19420567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
47, 116
               

               
Conread position:
               
225-372
               

               
Cow position:
               
chr4:59105656-59105506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
41, 82
               

               
Conread position:
               
226-384
               

               
Cow position:
               
chr4:50131544-50131713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
227-372
               

               
Cow position:
               
chr4:501654-501491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
227-399
               

               
Cow position:
               
chr4:21128164-21128333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
140, 74
               

               
Conread position:
               
227-407
               

               
Cow position:
               
chr4:27691644-27691456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
245-413
               

               
Cow position:
               
chr4:44024496-44024319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
28, 167
               

               
Conread position:
               
277-419
               

               
Cow position:
               
chr4:1184841-1184982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
91, 24
               
Show alignments to all cow chromosomes.