Cow genome map
| Conread name: | Ss1.1-Thy1-THY010030E04.5 |
| Conread position: | 1-165 |
| Cow position: | chr5:71743057-71742884 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 40, 89 |
| Conread position: | 328-458 |
| Cow position: | chr5:71733991-71733862 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 445-671 |
| Cow position: | chr5:71727161-71726934 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 214, 0 |
| Conread position: | 654-842 |
| Cow position: | chr5:71725551-71725363 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 836-988 |
| Cow position: | chr5:71724207-71724055 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 132 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 971-1080 |
| Cow position: | chr5:71722796-71722687 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1079-1222 |
| Cow position: | chr5:71719078-71718935 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 136 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1224-1321 |
| Cow position: | chr5:71715909-71715812 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1309-1476 |
| Cow position: | chr5:71713368-71713201 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 148 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1475-1751 |
| Cow position: | chr5:71708096-71707808 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 143 |
Show alignments to all cow chromosomes.