Cow genome map
| Conread name: | Ss1.1-Thy1-THY010038A08.5 |
| Conread position: | 4-142 |
| Cow position: | chr29:33325604-33325748 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 141-315 |
| Cow position: | chr29:33326313-33326487 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 162 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 318-551 |
| Cow position: | chr29:33329906-33330139 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 545-672 |
| Cow position: | chr29:33330350-33330478 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 669-841 |
| Cow position: | chr29:33330580-33330752 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 162 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 748-941 |
| Cow position: | chr29:33330872-33331061 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 52, 41 |
| Conread position: | 935-1049 |
| Cow position: | chr29:33340906-33341020 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1042-1185 |
| Cow position: | chr29:33341158-33341301 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 129 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1231-1360 |
| Cow position: | chr29:33341536-33341665 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 124 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1352-1470 |
| Cow position: | chr29:33341884-33342001 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 114 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 1467-1700 |
| Cow position: | chr29:33342151-33342390 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 1697-1827 |
| Cow position: | chr29:33342731-33342861 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 122 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1823-1980 |
| Cow position: | chr29:33343441-33343598 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 146 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1965-2514 |
| Cow position: | chr29:33343675-33344225 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 476 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 207 |
Show alignments to all cow chromosomes.