Cow genome map
| Conread name: | Ss1.1-Thy1-THY010039D03.5 |
| Conread position: | 1-198 |
| Cow position: | chr3:4784315-4784515 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 0 |
| Conread position: | 198-271 |
| Cow position: | chr3:4785422-4785495 (view UCSC Genome Browser custom track) |
| Alignm length: | 74 |
| Alignm identity: | 71 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 325-395 |
| Cow position: | chr3:4785426-4785496 (view UCSC Genome Browser custom track) |
| Alignm length: | 71 |
| Alignm identity: | 68 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 393-470 |
| Cow position: | chr3:4797871-4797948 (view UCSC Genome Browser custom track) |
| Alignm length: | 78 |
| Alignm identity: | 76 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 469-1141 |
| Cow position: | chr3:4800360-4801017 (view UCSC Genome Browser custom track) |
| Alignm length: | 673 |
| Alignm identity: | 622 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 255, 0 |
| Conread position: | 1136-1280 |
| Cow position: | chr3:4801975-4802119 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 139 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1285-1380 |
| Cow position: | chr3:4803168-4803263 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 90 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1377-1488 |
| Cow position: | chr3:4808145-4808256 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1486-1562 |
| Cow position: | chr3:4815314-4815390 (view UCSC Genome Browser custom track) |
| Alignm length: | 77 |
| Alignm identity: | 75 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1616-1726 |
| Cow position: | chr3:4816445-4816555 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1723-1859 |
| Cow position: | chr3:4817918-4818054 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 136 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1857-1985 |
| Cow position: | chr3:4821557-4821685 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 121 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1978-2094 |
| Cow position: | chr3:4822084-4822200 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 112 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2094-2328 |
| Cow position: | chr3:4822832-4823066 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.