Cow genome map
| Conread name: | Ss1.1-Thy1-THY010053E03.5 |
| Conread position: | 5-97 |
| Cow position: | chr13:20542034-20541942 (view UCSC Genome Browser custom track) |
| Alignm length: | 93 |
| Alignm identity: | 79 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 123-332 |
| Cow position: | chr13:48358241-48358463 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 102, 215 |
| Conread position: | 127-347 |
| Cow position: | chr13:9045315-9045553 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 223-342 |
| Cow position: | chr13:30244019-30243902 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 226-347 |
| Cow position: | chr13:52646213-52646091 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 231-338 |
| Cow position: | chr13:13900537-13900644 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 231-338 |
| Cow position: | chr13:30654712-30654605 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 87 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 231-338 |
| Cow position: | chr13:33335647-33335540 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 87 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 231-338 |
| Cow position: | chr13:43982430-43982323 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 86 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 231-343 |
| Cow position: | chr13:3653651-3653539 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 93 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 231-344 |
| Cow position: | chr13:4484463-4484575 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 231-347 |
| Cow position: | chr13:1592486-1592370 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 91 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 231-347 |
| Cow position: | chr13:2388146-2388030 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 92 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 231-347 |
| Cow position: | chr13:4942054-4942169 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 92 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 231-347 |
| Cow position: | chr13:15519838-15519722 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 94 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 231-347 |
| Cow position: | chr13:15543209-15543325 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 231-347 |
| Cow position: | chr13:15923711-15923595 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 93 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 231-347 |
| Cow position: | chr13:17309141-17309257 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 92 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 231-347 |
| Cow position: | chr13:21696920-21697036 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 95 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 231-347 |
| Cow position: | chr13:31611638-31611522 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 91 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 231-347 |
| Cow position: | chr13:32546049-32546165 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 94 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 231-347 |
| Cow position: | chr13:32737155-32737039 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 231-347 |
| Cow position: | chr13:34041665-34041552 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 92 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 231-347 |
| Cow position: | chr13:34424430-34424546 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 92 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 231-347 |
| Cow position: | chr13:35757941-35758057 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 95 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 231-347 |
| Cow position: | chr13:47229336-47229220 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 95 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 231-347 |
| Cow position: | chr13:58118241-58118125 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 93 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 231-347 |
| Cow position: | chr13:60466995-60467111 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 90 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 231-348 |
| Cow position: | chr13:20541376-20541260 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 231-348 |
| Cow position: | chr13:34938133-34938250 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 232-332 |
| Cow position: | chr13:23002628-23002528 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 85 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 232-338 |
| Cow position: | chr13:30238907-30239012 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 88 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 237-338 |
| Cow position: | chr13:43590006-43590107 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 85 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 237-347 |
| Cow position: | chr13:34324885-34324774 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 81, 0 |
Show alignments to all cow chromosomes.