Cow genome map

Conread name: Ss1.1-Thy1-THY010053E03.5

Conread position: 123-233
Cow position: chr6:6475144-6475033 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 102, 0

Conread position: 123-233
Cow position: chr6:30479825-30479936 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 102, 0

Conread position: 123-246
Cow position: chr6:13316748-13316626 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 100, 41

Conread position: 123-249
Cow position: chr6:26045564-26045692 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 102, 43

Conread position: 123-336
Cow position: chr6:11274173-11273950 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 164
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 93, 88

Conread position: 127-227
Cow position: chr6:6567317-6567417 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 82
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 127-338
Cow position: chr6:29312253-29312467 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 151
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 112, 0

Conread position: 127-344
Cow position: chr6:7178542-7178324 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 145
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 127-347
Cow position: chr6:55542521-55542291 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 172
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 102, 0

Conread position: 214-348
Cow position: chr6:18973567-18973431 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 96, 0

Conread position: 217-347
Cow position: chr6:28105017-28104888 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 223-347
Cow position: chr6:13310509-13310386 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 9, 0

Conread position: 223-347
Cow position: chr6:30274041-30273922 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 226-347
Cow position: chr6:15140329-15140203 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 6, 0

Conread position: 226-347
Cow position: chr6:15278959-15278837 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 102
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 6, 0

Conread position: 231-336
Cow position: chr6:64716844-64716949 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 91
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 231-337
Cow position: chr6:65882070-65882175 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 231-338
Cow position: chr6:27529146-27529036 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 93
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 231-338
Cow position: chr6:38271747-38271854 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 86
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 231-338
Cow position: chr6:39438623-39438730 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 93
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 231-340
Cow position: chr6:40553718-40553612 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 92, 0

Conread position: 231-343
Cow position: chr6:24239916-24240023 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 94
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 231-344
Cow position: chr6:35875858-35875745 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 96
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 231-344
Cow position: chr6:52693874-52693987 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 231-347
Cow position: chr6:185610-185494 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 231-347
Cow position: chr6:703075-703190 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 72, 0

Conread position: 231-347
Cow position: chr6:1821767-1821651 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 100
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 231-347
Cow position: chr6:2375557-2375672 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 231-347
Cow position: chr6:3276516-3276400 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 231-347
Cow position: chr6:5948919-5948803 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 231-347
Cow position: chr6:6567448-6567564 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 231-347
Cow position: chr6:7140604-7140489 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 64, 0

Conread position: 231-347
Cow position: chr6:8760432-8760316 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 231-347
Cow position: chr6:16052738-16052855 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 61, 0

Conread position: 231-347
Cow position: chr6:17046910-17047026 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 231-347
Cow position: chr6:21973512-21973628 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 231-347
Cow position: chr6:25215077-25215193 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 231-347
Cow position: chr6:25793955-25793839 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 97
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 231-347
Cow position: chr6:28169762-28169878 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 231-347
Cow position: chr6:34891266-34891150 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 231-347
Cow position: chr6:36527158-36527274 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 98
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 231-347
Cow position: chr6:39334011-39333895 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 231-347
Cow position: chr6:39910192-39910308 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 231-347
Cow position: chr6:40275946-40276061 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 64, 0

Conread position: 231-347
Cow position: chr6:43618574-43618690 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 231-347
Cow position: chr6:46573749-46573633 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 231-347
Cow position: chr6:47042343-47042227 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 231-347
Cow position: chr6:50646326-50646210 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 231-347
Cow position: chr6:51086801-51086917 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 231-347
Cow position: chr6:51715395-51715511 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 99
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 231-347
Cow position: chr6:51730955-51731071 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 231-347
Cow position: chr6:65821115-65820999 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 231-348
Cow position: chr6:3487565-3487448 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 231-348
Cow position: chr6:10644600-10644715 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 231-348
Cow position: chr6:28133788-28133905 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 231-348
Cow position: chr6:58601338-58601455 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 231-348
Cow position: chr6:59918217-59918100 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 233-347
Cow position: chr6:8203043-8203157 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 233-347
Cow position: chr6:58027533-58027647 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 234-347
Cow position: chr6:43792856-43792743 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.