Cow genome map
| Conread name: | Ss1.1-Thy1-THY010054A07.5 | 
| Conread position: | 1-361 | 
| Cow position: | chr3:41505032-41504662 (view UCSC Genome Browser custom track) | 
| Alignm length: | 377 | 
| Alignm identity: | 315 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 49, 147 | 
| Conread position: | 318-1483 | 
| Cow position: | chr3:42997240-42996066 (view UCSC Genome Browser custom track) | 
| Alignm length: | 1185 | 
| Alignm identity: | 1091 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 332, 299 | 
| Conread position: | 358-602 | 
| Cow position: | chr3:41501402-41501158 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 599-716 | 
| Cow position: | chr3:41493896-41493780 (view UCSC Genome Browser custom track) | 
| Alignm length: | 118 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 5e-33 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 693-855 | 
| Cow position: | chr3:41493407-41493245 (view UCSC Genome Browser custom track) | 
| Alignm length: | 163 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 852-1575 | 
| Cow position: | chr3:41488692-41487980 (view UCSC Genome Browser custom track) | 
| Alignm length: | 732 | 
| Alignm identity: | 684 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 108, 540 | 
Show alignments to all cow chromosomes.
