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Cow genome map

           
Conread name:
           
Ss1.1-Thy1-THY010056F04.5
        

               
Conread position:
               
889-1140
               

               
Cow position:
               
chr28:12672605-12672359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
162, 19
               

               
Conread position:
               
907-1135
               

               
Cow position:
               
chr28:30327218-30326991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
94, 81
               

               
Conread position:
               
909-1109
               

               
Cow position:
               
chr28:5826825-5827024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
46, 78
               

               
Conread position:
               
911-1140
               

               
Cow position:
               
chr28:9285497-9285272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
91, 77
               

               
Conread position:
               
912-1140
               

               
Cow position:
               
chr28:10053455-10053220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
90, 76
               

               
Conread position:
               
913-1120
               

               
Cow position:
               
chr28:25806450-25806658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
16, 76
               

               
Conread position:
               
913-1139
               

               
Cow position:
               
chr28:13865721-13865943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
74, 79
               

               
Conread position:
               
913-1139
               

               
Cow position:
               
chr28:25056849-25057066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
913-1140
               

               
Cow position:
               
chr28:25728077-25728299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
18, 77
               

               
Conread position:
               
917-1096
               

               
Cow position:
               
chr28:7549177-7548997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
88, 71
               

               
Conread position:
               
917-1140
               

               
Cow position:
               
chr28:3746088-3746307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
138, 55
               

               
Conread position:
               
917-1140
               

               
Cow position:
               
chr28:4834959-4834740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
85, 58
               

               
Conread position:
               
917-1140
               

               
Cow position:
               
chr28:15043979-15043757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
87, 67
               

               
Conread position:
               
917-1140
               

               
Cow position:
               
chr28:33884291-33884506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
87, 49
               

               
Conread position:
               
918-1062
               

               
Cow position:
               
chr28:7608096-7607949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
95, 70
               

               
Conread position:
               
918-1096
               

               
Cow position:
               
chr28:2737924-2737745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
86, 70
               

               
Conread position:
               
918-1096
               

               
Cow position:
               
chr28:4587983-4588158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
82, 57
               

               
Conread position:
               
918-1096
               

               
Cow position:
               
chr28:7751413-7751240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
87, 28
               

               
Conread position:
               
918-1111
               

               
Cow position:
               
chr28:10534048-10533859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
83, 14
               

               
Conread position:
               
918-1116
               

               
Cow position:
               
chr28:5074626-5074427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
87, 71
               

               
Conread position:
               
918-1123
               

               
Cow position:
               
chr28:7512704-7512496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
11, 71
               

               
Conread position:
               
918-1123
               

               
Cow position:
               
chr28:13267669-13267877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
9, 71
               

               
Conread position:
               
918-1127
               

               
Cow position:
               
chr28:3449183-3449395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
16, 74
               

               
Conread position:
               
918-1133
               

               
Cow position:
               
chr28:4536340-4536558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
151, 70
               

               
Conread position:
               
918-1134
               

               
Cow position:
               
chr28:5931236-5931451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
13, 30
               

               
Conread position:
               
918-1138
               

               
Cow position:
               
chr28:3492901-3492681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
89, 68
               

               
Conread position:
               
918-1138
               

               
Cow position:
               
chr28:23676024-23676241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
918-1138
               

               
Cow position:
               
chr28:33163580-33163361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
83, 70
               

               
Conread position:
               
918-1139
               

               
Cow position:
               
chr28:2862749-2862972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
85, 72
               

               
Conread position:
               
918-1139
               

               
Cow position:
               
chr28:4282606-4282387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
8, 26
               

               
Conread position:
               
918-1139
               

               
Cow position:
               
chr28:14512406-14512637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
83, 9
               

               
Conread position:
               
918-1139
               

               
Cow position:
               
chr28:26614768-26614977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
33, 48
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr28:661994-662213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
206, 19
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr28:1538052-1538266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
14, 56
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr28:2132037-2131819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
86, 11
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr28:3408330-3408114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
22, 41
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr28:4016422-4016636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
85, 37
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr28:4070853-4071071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
137, 71
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr28:4158842-4159060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 48
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr28:4884379-4884148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
87, 44
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr28:5128842-5128623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
87, 34
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr28:5204076-5204300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 68
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr28:5437204-5436984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
87, 71
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr28:5684594-5684807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
102, 54
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr28:5817726-5817947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
11, 62
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr28:6059584-6059365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
96, 16
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr28:6091247-6091468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
106, 46
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr28:6971460-6971243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 31
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr28:7268052-7267841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr28:7865208-7865434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
82, 68
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr28:8022225-8021998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 16
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr28:8140366-8140587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 70
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr28:8787423-8787644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
82, 70
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr28:9636569-9636352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr28:10172526-10172312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr28:11079190-11079407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
83, 70
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr28:11426658-11426436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 70
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr28:11585321-11585097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
82, 70
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr28:11752257-11752034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
87, 43
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr28:11786829-11786612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
11, 55
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr28:11829054-11828857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr28:11866781-11866560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
43, 32
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr28:11884636-11884416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
96, 68
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr28:12430491-12430709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
96, 69
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr28:12892550-12892332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
93, 70
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr28:12964453-12964672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
84, 39
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr28:13474184-13474405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr28:14649232-14649447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
83, 68
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr28:14997948-14998172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
86, 68
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr28:16346643-16346427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
88, 14
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr28:16370192-16369978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr28:16919276-16919064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr28:18591157-18591375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
83, 51
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr28:19026128-19025900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr28:21355108-21355336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
83, 11
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr28:21598370-21598145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
82, 72
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr28:21844843-21845062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
85, 43
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr28:21868339-21868562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 70
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr28:22332419-22332633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
101, 57
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr28:22345903-22346126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
94, 56
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr28:23007850-23007625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
83, 70
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr28:23410443-23410218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
14, 75
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr28:23724571-23724354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
180, 70
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr28:24082151-24082375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
86, 20
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr28:25596516-25596733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
87, 28
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr28:26220139-26220361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
87, 71
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr28:26719234-26719448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr28:28163970-28164190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
84, 70
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr28:29416829-29416612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
82, 29
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr28:29989229-29989005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
146, 53
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr28:30937779-30937566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr28:31110122-31109899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
16, 72
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr28:33051912-33052142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
919-1115
               

               
Cow position:
               
chr28:11687144-11686948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
134, 69
               

               
Conread position:
               
919-1131
               

               
Cow position:
               
chr28:10606743-10606538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
82, 69
               

               
Conread position:
               
919-1139
               

               
Cow position:
               
chr28:2960947-2960726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
83, 45
               

               
Conread position:
               
919-1140
               

               
Cow position:
               
chr28:2872802-2873024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
83, 56
               

               
Conread position:
               
919-1140
               

               
Cow position:
               
chr28:3914596-3914822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 69
               

               
Conread position:
               
919-1140
               

               
Cow position:
               
chr28:4090163-4089953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
919-1140
               

               
Cow position:
               
chr28:10863897-10863687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
80, 24
               

               
Conread position:
               
919-1140
               

               
Cow position:
               
chr28:11527374-11527154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
88, 56
               

               
Conread position:
               
919-1140
               

               
Cow position:
               
chr28:21380763-21380984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
82, 69
               

               
Conread position:
               
919-1140
               

               
Cow position:
               
chr28:25128768-25128991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
85, 70
               

               
Conread position:
               
919-1140
               

               
Cow position:
               
chr28:25249239-25249459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
919-1140
               

               
Cow position:
               
chr28:30746843-30746624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
94, 69
               

               
Conread position:
               
920-1098
               

               
Cow position:
               
chr28:3256683-3256861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
80, 68
               

               
Conread position:
               
920-1117
               

               
Cow position:
               
chr28:616270-616468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
83, 9
               

               
Conread position:
               
920-1125
               

               
Cow position:
               
chr28:3024026-3023823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
94, 36
               

               
Conread position:
               
920-1125
               

               
Cow position:
               
chr28:8408620-8408824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
81, 68
               

               
Conread position:
               
920-1135
               

               
Cow position:
               
chr28:18186440-18186656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
81, 66
               

               
Conread position:
               
920-1140
               

               
Cow position:
               
chr28:1632770-1632552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
35, 103
               

               
Conread position:
               
920-1140
               

               
Cow position:
               
chr28:3169309-3169084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
92, 70
               

               
Conread position:
               
920-1140
               

               
Cow position:
               
chr28:16204443-16204229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
920-1140
               

               
Cow position:
               
chr28:20124669-20124890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 69
               

               
Conread position:
               
921-1136
               

               
Cow position:
               
chr28:16109829-16110037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
90, 29
               

               
Conread position:
               
921-1139
               

               
Cow position:
               
chr28:11346597-11346383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
921-1139
               

               
Cow position:
               
chr28:24017884-24018088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
26, 51
               

               
Conread position:
               
921-1139
               

               
Cow position:
               
chr28:27218211-27218426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
921-1140
               

               
Cow position:
               
chr28:4308018-4307793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
10, 68
               

               
Conread position:
               
921-1140
               

               
Cow position:
               
chr28:5193207-5193437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
80, 67
               

               
Conread position:
               
921-1140
               

               
Cow position:
               
chr28:5577412-5577634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
96, 67
               

               
Conread position:
               
921-1140
               

               
Cow position:
               
chr28:16085211-16085430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
80, 53
               

               
Conread position:
               
921-1140
               

               
Cow position:
               
chr28:22813152-22813363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
92, 37
               

               
Conread position:
               
922-1123
               

               
Cow position:
               
chr28:12946836-12947037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
82, 54
               

               
Conread position:
               
922-1130
               

               
Cow position:
               
chr28:18625117-18625329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
922-1137
               

               
Cow position:
               
chr28:7372233-7372020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
922-1140
               

               
Cow position:
               
chr28:2898886-2899094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
922-1140
               

               
Cow position:
               
chr28:3011385-3011165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
76, 66
               

               
Conread position:
               
922-1140
               

               
Cow position:
               
chr28:3740767-3740981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
26, 67
               

               
Conread position:
               
922-1140
               

               
Cow position:
               
chr28:4881349-4881135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
922-1140
               

               
Cow position:
               
chr28:5166654-5166872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
79, 66
               

               
Conread position:
               
922-1140
               

               
Cow position:
               
chr28:7228495-7228285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
82, 29
               

               
Conread position:
               
922-1140
               

               
Cow position:
               
chr28:12619454-12619679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
21, 69
               

               
Conread position:
               
922-1140
               

               
Cow position:
               
chr28:19079955-19079741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
124, 65
               

               
Conread position:
               
922-1140
               

               
Cow position:
               
chr28:20313163-20313382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
79, 52
               

               
Conread position:
               
922-1140
               

               
Cow position:
               
chr28:26922479-26922263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
922-1140
               

               
Cow position:
               
chr28:26982849-26982633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
124, 66
               

               
Conread position:
               
922-1140
               

               
Cow position:
               
chr28:27161440-27161222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
79, 66
               

               
Conread position:
               
923-1140
               

               
Cow position:
               
chr28:2752605-2752389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
96, 16
               

               
Conread position:
               
923-1140
               

               
Cow position:
               
chr28:21363634-21363845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
78, 65
               

               
Conread position:
               
924-1138
               

               
Cow position:
               
chr28:9740356-9740569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
79, 48
               

               
Conread position:
               
924-1140
               

               
Cow position:
               
chr28:19564338-19564123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
77, 33
               

               
Conread position:
               
924-1140
               

               
Cow position:
               
chr28:34248133-34247924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
925-1140
               

               
Cow position:
               
chr28:26743514-26743731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
44, 64
               

               
Conread position:
               
926-1140
               

               
Cow position:
               
chr28:11422924-11422711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
79, 62
               

               
Conread position:
               
927-1109
               

               
Cow position:
               
chr28:12363268-12363083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
49, 62
               

               
Conread position:
               
927-1115
               

               
Cow position:
               
chr28:10745105-10745294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
77, 61
               

               
Conread position:
               
927-1139
               

               
Cow position:
               
chr28:17601982-17601771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
27, 61
               

               
Conread position:
               
927-1140
               

               
Cow position:
               
chr28:7009084-7008873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
69, 59
               

               
Conread position:
               
930-1140
               

               
Cow position:
               
chr28:5144621-5144417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
930-1140
               

               
Cow position:
               
chr28:11307612-11307414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
932-1140
               

               
Cow position:
               
chr28:4181900-4182106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
13, 57
               

               
Conread position:
               
932-1140
               

               
Cow position:
               
chr28:32174527-32174734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
69, 56
               

               
Conread position:
               
932-1140
               

               
Cow position:
               
chr28:34133760-34133966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
92, 39
               

               
Conread position:
               
934-1140
               

               
Cow position:
               
chr28:19222250-19222046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
83, 40
               

               
Conread position:
               
936-1140
               

               
Cow position:
               
chr28:16246165-16245960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
66, 18
               

               
Conread position:
               
938-1140
               

               
Cow position:
               
chr28:4179457-4179656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
73, 51
               

               
Conread position:
               
938-1140
               

               
Cow position:
               
chr28:13233205-13233009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
164, 51
               

               
Conread position:
               
939-1140
               

               
Cow position:
               
chr28:1099755-1099559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
72, 33
               

               
Conread position:
               
939-1140
               

               
Cow position:
               
chr28:10589123-10588917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
17, 53
               

               
Conread position:
               
939-1140
               

               
Cow position:
               
chr28:24706807-24707002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
17, 52
               

               
Conread position:
               
941-1140
               

               
Cow position:
               
chr28:8147955-8147759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
60, 47
               

               
Conread position:
               
944-1140
               

               
Cow position:
               
chr28:32365752-32365949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
57, 44
               

               
Conread position:
               
946-1140
               

               
Cow position:
               
chr28:7927086-7927279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
48, 42
               

               
Conread position:
               
947-1140
               

               
Cow position:
               
chr28:10977754-10977946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
18, 42
               

               
Conread position:
               
948-1140
               

               
Cow position:
               
chr28:7350571-7350759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
949-1140
               

               
Cow position:
               
chr28:7619238-7619045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
52, 39
               

               
Conread position:
               
951-1140
               

               
Cow position:
               
chr28:7388851-7388667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
12, 38
               

               
Conread position:
               
953-1120
               

               
Cow position:
               
chr28:5139078-5138906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
50, 35
               

               
Conread position:
               
953-1139
               

               
Cow position:
               
chr28:4809706-4809883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
24, 37
               

               
Conread position:
               
953-1140
               

               
Cow position:
               
chr28:12070154-12070336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
61, 23
               

               
Conread position:
               
955-1139
               

               
Cow position:
               
chr28:25677426-25677237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
56, 33
               

               
Conread position:
               
956-1140
               

               
Cow position:
               
chr28:11348351-11348527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
48, 27
               

               
Conread position:
               
957-1140
               

               
Cow position:
               
chr28:24966307-24966492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
54, 30
               

               
Conread position:
               
960-1140
               

               
Cow position:
               
chr28:3275416-3275596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
42, 27
               

               
Conread position:
               
961-1140
               

               
Cow position:
               
chr28:3411066-3410879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
9, 28
               

               
Conread position:
               
963-1140
               

               
Cow position:
               
chr28:20759775-20759597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
24, 49
               

               
Conread position:
               
966-1140
               

               
Cow position:
               
chr28:16211172-16210996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
39, 22
               

               
Conread position:
               
968-1140
               

               
Cow position:
               
chr28:4013020-4013189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
969-1135
               

               
Cow position:
               
chr28:4823541-4823704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
27, 19
               

               
Conread position:
               
969-1140
               

               
Cow position:
               
chr28:777602-777781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
970-1140
               

               
Cow position:
               
chr28:26531346-26531174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
51, 18
               

               
Conread position:
               
972-1135
               

               
Cow position:
               
chr28:3445545-3445382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
33, 16
               

               
Conread position:
               
972-1140
               

               
Cow position:
               
chr28:7132138-7131983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
124, 16
               

               
Conread position:
               
973-1140
               

               
Cow position:
               
chr28:4765614-4765781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
28, 15
               

               
Conread position:
               
980-1138
               

               
Cow position:
               
chr28:9684387-9684231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
983-1140
               

               
Cow position:
               
chr28:2762142-2762300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
22, 5
               

               
Conread position:
               
988-1140
               

               
Cow position:
               
chr28:4438662-4438817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
997-1140
               

               
Cow position:
               
chr28:6975202-6975346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
997-1140
               

               
Cow position:
               
chr28:17739785-17739927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
12, 67
               

               
Conread position:
               
997-1140
               

               
Cow position:
               
chr28:17949154-17949008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
1003-1140
               

               
Cow position:
               
chr28:5254842-5254979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1004-1140
               

               
Cow position:
               
chr28:11816697-11816561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1010-1140
               

               
Cow position:
               
chr28:10775738-10775606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
57, 93
               

               
Conread position:
               
1011-1113
               

               
Cow position:
               
chr28:17393752-17393855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
1011-1139
               

               
Cow position:
               
chr28:12991112-12991246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
1011-1140
               

               
Cow position:
               
chr28:5205247-5205376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1012-1138
               

               
Cow position:
               
chr28:8304224-8304350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
45, 62
               

               
Conread position:
               
1015-1140
               

               
Cow position:
               
chr28:8149652-8149527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1017-1140
               

               
Cow position:
               
chr28:7498165-7498042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1017-1140
               

               
Cow position:
               
chr28:10964404-10964524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
6, 47
               

               
Conread position:
               
1020-1135
               

               
Cow position:
               
chr28:29850830-29850715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1022-1140
               

               
Cow position:
               
chr28:3397210-3397098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
1024-1140
               

               
Cow position:
               
chr28:3147471-3147584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
1025-1140
               

               
Cow position:
               
chr28:22148025-22147909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
1028-1140
               

               
Cow position:
               
chr28:8396328-8396440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1029-1140
               

               
Cow position:
               
chr28:16879567-16879678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1029-1140
               

               
Cow position:
               
chr28:25675511-25675400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1031-1140
               

               
Cow position:
               
chr28:30902122-30902231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1035-1140
               

               
Cow position:
               
chr28:7557734-7557629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1043-1140
               

               
Cow position:
               
chr28:9109224-9109320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
98
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
91, 0
               
Show alignments to all cow chromosomes.