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Cow genome map

           
Conread name:
           
Ss1.1-Thy1-THY010056F04.5
        

               
Conread position:
               
1-331
               

               
Cow position:
               
chr5:18886630-18886289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
146, 41
               

               
Conread position:
               
878-1140
               

               
Cow position:
               
chr5:26477149-26476892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
23, 102
               

               
Conread position:
               
881-1140
               

               
Cow position:
               
chr5:55019160-55019418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
48, 103
               

               
Conread position:
               
885-1140
               

               
Cow position:
               
chr5:35969414-35969658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
116, 17
               

               
Conread position:
               
885-1140
               

               
Cow position:
               
chr5:39447659-39447406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
27, 6
               

               
Conread position:
               
904-1140
               

               
Cow position:
               
chr5:5257403-5257162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
909-1140
               

               
Cow position:
               
chr5:51935088-51935316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
229, 19
               

               
Conread position:
               
910-1140
               

               
Cow position:
               
chr5:60747382-60747155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
91, 78
               

               
Conread position:
               
911-1112
               

               
Cow position:
               
chr5:63865692-63865893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
90, 77
               

               
Conread position:
               
911-1140
               

               
Cow position:
               
chr5:30845010-30845236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
90, 61
               

               
Conread position:
               
913-1081
               

               
Cow position:
               
chr5:64823412-64823244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
88, 45
               

               
Conread position:
               
913-1140
               

               
Cow position:
               
chr5:6286525-6286307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
913-1140
               

               
Cow position:
               
chr5:29903623-29903397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
17, 77
               

               
Conread position:
               
913-1140
               

               
Cow position:
               
chr5:53835613-53835842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
88, 13
               

               
Conread position:
               
916-1140
               

               
Cow position:
               
chr5:11229767-11229547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
195, 70
               

               
Conread position:
               
917-1140
               

               
Cow position:
               
chr5:7755659-7755444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
917-1140
               

               
Cow position:
               
chr5:27172078-27171867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
95, 71
               

               
Conread position:
               
917-1140
               

               
Cow position:
               
chr5:61725875-61726090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
87, 12
               

               
Conread position:
               
917-1140
               

               
Cow position:
               
chr5:66338982-66339201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
94, 71
               

               
Conread position:
               
917-1140
               

               
Cow position:
               
chr5:72006951-72006739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
918-1045
               

               
Cow position:
               
chr5:38647262-38647386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
918-1047
               

               
Cow position:
               
chr5:34288567-34288435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
83, 70
               

               
Conread position:
               
918-1051
               

               
Cow position:
               
chr5:51357596-51357464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
918-1060
               

               
Cow position:
               
chr5:4797412-4797277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
918-1060
               

               
Cow position:
               
chr5:27015588-27015726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
95, 54
               

               
Conread position:
               
918-1067
               

               
Cow position:
               
chr5:12709792-12709942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
80, 70
               

               
Conread position:
               
918-1086
               

               
Cow position:
               
chr5:6670290-6670121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
83, 43
               

               
Conread position:
               
918-1092
               

               
Cow position:
               
chr5:32140804-32140630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
86, 43
               

               
Conread position:
               
918-1096
               

               
Cow position:
               
chr5:31144883-31144705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
87, 8
               

               
Conread position:
               
918-1112
               

               
Cow position:
               
chr5:16508999-16509204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
11, 75
               

               
Conread position:
               
918-1114
               

               
Cow position:
               
chr5:34638788-34638983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
83, 70
               

               
Conread position:
               
918-1114
               

               
Cow position:
               
chr5:69520797-69520991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
86, 45
               

               
Conread position:
               
918-1122
               

               
Cow position:
               
chr5:31918557-31918750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
98, 9
               

               
Conread position:
               
918-1122
               

               
Cow position:
               
chr5:40039866-40039657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
83, 66
               

               
Conread position:
               
918-1123
               

               
Cow position:
               
chr5:44049602-44049807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
9, 74
               

               
Conread position:
               
918-1126
               

               
Cow position:
               
chr5:41010089-41009892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
78, 41
               

               
Conread position:
               
918-1126
               

               
Cow position:
               
chr5:46425947-46425743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
86, 54
               

               
Conread position:
               
918-1127
               

               
Cow position:
               
chr5:35763179-35763375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
101, 71
               

               
Conread position:
               
918-1127
               

               
Cow position:
               
chr5:59115285-59115495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
15, 75
               

               
Conread position:
               
918-1130
               

               
Cow position:
               
chr5:43738050-43737847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
79, 70
               

               
Conread position:
               
918-1132
               

               
Cow position:
               
chr5:20407763-20407560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
83, 54
               

               
Conread position:
               
918-1132
               

               
Cow position:
               
chr5:55966975-55966762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
100, 70
               

               
Conread position:
               
918-1133
               

               
Cow position:
               
chr5:30276601-30276809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
918-1133
               

               
Cow position:
               
chr5:32696917-32696704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
83, 45
               

               
Conread position:
               
918-1134
               

               
Cow position:
               
chr5:56635804-56636015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
11, 58
               

               
Conread position:
               
918-1136
               

               
Cow position:
               
chr5:65588607-65588821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
83, 57
               

               
Conread position:
               
918-1137
               

               
Cow position:
               
chr5:49474641-49474422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
58, 28
               

               
Conread position:
               
918-1137
               

               
Cow position:
               
chr5:67540299-67540078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
92, 63
               

               
Conread position:
               
918-1138
               

               
Cow position:
               
chr5:21617362-21617582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
99, 23
               

               
Conread position:
               
918-1138
               

               
Cow position:
               
chr5:24349011-24349231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
7, 71
               

               
Conread position:
               
918-1138
               

               
Cow position:
               
chr5:27154927-27155129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
28, 8
               

               
Conread position:
               
918-1138
               

               
Cow position:
               
chr5:44994134-44993925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
83, 49
               

               
Conread position:
               
918-1138
               

               
Cow position:
               
chr5:59082288-59082070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
86, 8
               

               
Conread position:
               
918-1138
               

               
Cow position:
               
chr5:64523963-64523739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
83, 74
               

               
Conread position:
               
918-1138
               

               
Cow position:
               
chr5:72951745-72951968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
82, 75
               

               
Conread position:
               
918-1138
               

               
Cow position:
               
chr5:74643767-74643554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
918-1139
               

               
Cow position:
               
chr5:16214589-16214812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
83, 16
               

               
Conread position:
               
918-1139
               

               
Cow position:
               
chr5:29827953-29828171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
139, 70
               

               
Conread position:
               
918-1139
               

               
Cow position:
               
chr5:46509962-46509740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
91, 21
               

               
Conread position:
               
918-1139
               

               
Cow position:
               
chr5:49440968-49440746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
87, 53
               

               
Conread position:
               
918-1139
               

               
Cow position:
               
chr5:57737014-57737224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
918-1139
               

               
Cow position:
               
chr5:64176213-64176001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
918-1139
               

               
Cow position:
               
chr5:74580700-74580914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
82, 36
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:991370-991600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
96, 70
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:3582478-3582686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:4220888-4221104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
118, 68
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:5111171-5110943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
83, 70
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:6045195-6045422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 70
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:6683451-6683241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
31, 8
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:7044803-7044579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 70
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:7697909-7698126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
192, 70
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:9090116-9089902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:9894225-9893997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
64, 73
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:11427333-11427109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
10, 72
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:12322897-12322681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
83, 60
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:12434439-12434669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
81, 43
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:12557388-12557161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
81, 66
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:12673558-12673352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:14314429-14314654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
85, 70
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:14629909-14629679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
86, 68
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:14921026-14920804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
87, 54
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:15598329-15598112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
84, 60
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:15722162-15721948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:16206251-16206029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
82, 70
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:16893868-16893645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
98, 29
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:17768240-17768023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
155, 68
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:18289033-18289248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
11, 71
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:19278796-19278581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
142, 70
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:20422280-20422067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:20783528-20783748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
83, 55
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:21828770-21828993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 70
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:22643313-22643106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
79, 24
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:23168921-23168700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
83, 29
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:24996319-24996097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 70
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:25035339-25035132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:26467527-26467754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
98, 70
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:26990296-26990514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
83, 70
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:30232803-30233033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
39, 76
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:30253645-30253867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 70
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:30302797-30303017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
86, 70
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:30629254-30629031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
93, 59
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:30950012-30949789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
83, 59
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:32339060-32338839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
93, 54
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:34561916-34562143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:35247206-35246984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
9, 34
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:35684842-35685061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
83, 39
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:35826507-35826728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
95, 70
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:36039100-36038875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
86, 45
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:36855108-36855332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
11, 94
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:37190192-37189972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
7, 71
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:37645978-37646207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
85, 69
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:37646644-37646418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
42, 72
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:37814527-37814752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
121, 20
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:38833027-38833247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
88, 51
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:41164990-41165214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
85, 66
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:41293984-41294206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
11, 71
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:41713206-41713425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
83, 24
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:42050455-42050678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
86, 59
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:43929833-43929610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
87, 48
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:43992225-43992450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
13, 75
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:44726422-44726208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:44796828-44796607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
11, 74
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:45225921-45225691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
5, 67
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:45397482-45397695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
86, 32
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:45574519-45574746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
82, 72
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:45803967-45804185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
99, 25
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:45845788-45845562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
83, 53
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:46512859-46512643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:47601723-47601938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:47696538-47696324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:48009945-48009733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
64, 71
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:50533483-50533262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
79, 70
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:50599960-50600174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
175, 62
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:50821686-50821909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 70
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:52000126-52000344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
82, 70
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:52165275-52165053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
11, 71
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:54311236-54311461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
14, 73
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:54375603-54375376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
95, 70
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:55176794-55177012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
86, 69
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:56014638-56014857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
87, 39
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:56070760-56070985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
83, 72
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:56524079-56524300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
87, 41
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:57575673-57575899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
85, 70
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:57626710-57626914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
86, 39
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:57935205-57934982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 70
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:58446707-58446933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:58856007-58856228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
22, 71
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:60016071-60016291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
83, 70
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:60715454-60715242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
87, 58
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:62142574-62142802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
12, 38
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:63992259-63992046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
86, 26
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:64027104-64026893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:64139470-64139686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:64321657-64321875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
64, 20
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:65941346-65941124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 57
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:65967824-65967605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
86, 53
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:66257543-66257762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
102, 25
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:68718778-68718993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
84, 14
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:69461238-69461461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
87, 54
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:69731411-69731626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
84, 57
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:70951972-70951763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
918-1140
               

               
Cow position:
               
chr5:72895592-72895812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
104, 14
               

               
Conread position:
               
919-1057
               

               
Cow position:
               
chr5:6086653-6086517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
82, 70
               

               
Conread position:
               
919-1062
               

               
Cow position:
               
chr5:60126276-60126421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
82, 69
               

               
Conread position:
               
919-1110
               

               
Cow position:
               
chr5:56820357-56820168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
77, 65
               

               
Conread position:
               
919-1137
               

               
Cow position:
               
chr5:56028622-56028418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
919-1138
               

               
Cow position:
               
chr5:42744693-42744904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
82, 53
               

               
Conread position:
               
919-1138
               

               
Cow position:
               
chr5:56317203-56317413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
919-1138
               

               
Cow position:
               
chr5:74015845-74016064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
88, 67
               

               
Conread position:
               
919-1140
               

               
Cow position:
               
chr5:25495446-25495232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
41, 71
               

               
Conread position:
               
919-1140
               

               
Cow position:
               
chr5:28927684-28927468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
82, 69
               

               
Conread position:
               
919-1140
               

               
Cow position:
               
chr5:34300821-34301042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
82, 69
               

               
Conread position:
               
919-1140
               

               
Cow position:
               
chr5:44446963-44446739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 69
               

               
Conread position:
               
919-1140
               

               
Cow position:
               
chr5:46322906-46322677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
12, 104
               

               
Conread position:
               
919-1140
               

               
Cow position:
               
chr5:50943245-50943030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
34, 72
               

               
Conread position:
               
919-1140
               

               
Cow position:
               
chr5:57074429-57074205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
27, 58
               

               
Conread position:
               
919-1140
               

               
Cow position:
               
chr5:60183706-60183931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 69
               

               
Conread position:
               
919-1140
               

               
Cow position:
               
chr5:62172321-62172538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
919-1140
               

               
Cow position:
               
chr5:62378696-62378906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
919-1140
               

               
Cow position:
               
chr5:64592189-64591969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
90, 52
               

               
Conread position:
               
919-1140
               

               
Cow position:
               
chr5:73418377-73418164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
920-1139
               

               
Cow position:
               
chr5:44028395-44028182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
85, 22
               

               
Conread position:
               
920-1140
               

               
Cow position:
               
chr5:17087119-17086895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
26, 67
               

               
Conread position:
               
920-1140
               

               
Cow position:
               
chr5:22242868-22242639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
81, 47
               

               
Conread position:
               
920-1140
               

               
Cow position:
               
chr5:43457610-43457405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
176, 30
               

               
Conread position:
               
920-1140
               

               
Cow position:
               
chr5:56548484-56548697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
48, 70
               

               
Conread position:
               
920-1140
               

               
Cow position:
               
chr5:61810692-61810897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
920-1140
               

               
Cow position:
               
chr5:65776476-65776258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
124, 68
               

               
Conread position:
               
920-1140
               

               
Cow position:
               
chr5:69337735-69337946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
28, 38
               

               
Conread position:
               
920-1140
               

               
Cow position:
               
chr5:72564666-72564890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
11, 70
               

               
Conread position:
               
921-1116
               

               
Cow position:
               
chr5:45273594-45273399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
11, 68
               

               
Conread position:
               
921-1134
               

               
Cow position:
               
chr5:8024288-8024080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
75, 63
               

               
Conread position:
               
921-1137
               

               
Cow position:
               
chr5:17999585-17999374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
80, 67
               

               
Conread position:
               
921-1140
               

               
Cow position:
               
chr5:4710238-4710026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
921-1140
               

               
Cow position:
               
chr5:39258429-39258631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
921-1140
               

               
Cow position:
               
chr5:42845691-42845465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
24, 68
               

               
Conread position:
               
921-1140
               

               
Cow position:
               
chr5:55068618-55068832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
81, 25
               

               
Conread position:
               
921-1140
               

               
Cow position:
               
chr5:55232888-55232687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
209, 29
               

               
Conread position:
               
921-1140
               

               
Cow position:
               
chr5:64758864-64758641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
80, 66
               

               
Conread position:
               
922-1082
               

               
Cow position:
               
chr5:21964195-21964357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
922-1115
               

               
Cow position:
               
chr5:43371287-43371094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
66, 70
               

               
Conread position:
               
922-1123
               

               
Cow position:
               
chr5:19523808-19524009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
88, 66
               

               
Conread position:
               
922-1123
               

               
Cow position:
               
chr5:61576452-61576654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
52, 67
               

               
Conread position:
               
922-1123
               

               
Cow position:
               
chr5:64137162-64137365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
77, 68
               

               
Conread position:
               
922-1127
               

               
Cow position:
               
chr5:61840100-61840302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
92, 66
               

               
Conread position:
               
922-1130
               

               
Cow position:
               
chr5:55928852-55929060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
77, 20
               

               
Conread position:
               
922-1130
               

               
Cow position:
               
chr5:65883865-65883656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
82, 62
               

               
Conread position:
               
922-1134
               

               
Cow position:
               
chr5:1087288-1087079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
922-1137
               

               
Cow position:
               
chr5:14473505-14473281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
922-1138
               

               
Cow position:
               
chr5:5855776-5855982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
922-1138
               

               
Cow position:
               
chr5:54060185-54060400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
79, 69
               

               
Conread position:
               
922-1139
               

               
Cow position:
               
chr5:39875034-39875249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
85, 9
               

               
Conread position:
               
922-1139
               

               
Cow position:
               
chr5:49685362-49685150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
79, 66
               

               
Conread position:
               
922-1140
               

               
Cow position:
               
chr5:458400-458614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
79, 11
               

               
Conread position:
               
922-1140
               

               
Cow position:
               
chr5:4032084-4031860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
77, 66
               

               
Conread position:
               
922-1140
               

               
Cow position:
               
chr5:7723580-7723791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
108, 25
               

               
Conread position:
               
922-1140
               

               
Cow position:
               
chr5:11668277-11668059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
60, 67
               

               
Conread position:
               
922-1140
               

               
Cow position:
               
chr5:13717659-13717444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
77, 65
               

               
Conread position:
               
922-1140
               

               
Cow position:
               
chr5:17555125-17554907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
12, 23
               

               
Conread position:
               
922-1140
               

               
Cow position:
               
chr5:21040065-21039857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
922-1140
               

               
Cow position:
               
chr5:23678794-23678577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
79, 62
               

               
Conread position:
               
922-1140
               

               
Cow position:
               
chr5:30805077-30805290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
922-1140
               

               
Cow position:
               
chr5:35125961-35126180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
78, 61
               

               
Conread position:
               
922-1140
               

               
Cow position:
               
chr5:35976429-35976636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
127, 50
               

               
Conread position:
               
922-1140
               

               
Cow position:
               
chr5:50575693-50575909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
79, 66
               

               
Conread position:
               
922-1140
               

               
Cow position:
               
chr5:53710782-53710563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
82, 66
               

               
Conread position:
               
922-1140
               

               
Cow position:
               
chr5:56467608-56467816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
922-1140
               

               
Cow position:
               
chr5:56680158-56680382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
76, 9
               

               
Conread position:
               
922-1140
               

               
Cow position:
               
chr5:57101866-57101655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
83, 44
               

               
Conread position:
               
922-1140
               

               
Cow position:
               
chr5:59325927-59325716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
145, 66
               

               
Conread position:
               
922-1140
               

               
Cow position:
               
chr5:65752765-65752986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
79, 66
               

               
Conread position:
               
923-1140
               

               
Cow position:
               
chr5:26262763-26262553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
78, 10
               

               
Conread position:
               
923-1140
               

               
Cow position:
               
chr5:37808760-37808537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
78, 56
               

               
Conread position:
               
923-1140
               

               
Cow position:
               
chr5:54768000-54767783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
73, 65
               

               
Conread position:
               
923-1140
               

               
Cow position:
               
chr5:55756516-55756289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
78, 65
               

               
Conread position:
               
923-1140
               

               
Cow position:
               
chr5:67932555-67932346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
78, 59
               

               
Conread position:
               
924-1123
               

               
Cow position:
               
chr5:47704217-47704017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
31, 67
               

               
Conread position:
               
924-1126
               

               
Cow position:
               
chr5:45472184-45472399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
36, 71
               

               
Conread position:
               
924-1140
               

               
Cow position:
               
chr5:26377759-26377542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
78, 66
               

               
Conread position:
               
924-1140
               

               
Cow position:
               
chr5:40241954-40242169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
93, 25
               

               
Conread position:
               
924-1140
               

               
Cow position:
               
chr5:42064113-42064331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
77, 64
               

               
Conread position:
               
924-1140
               

               
Cow position:
               
chr5:46023147-46022937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
149, 33
               

               
Conread position:
               
924-1140
               

               
Cow position:
               
chr5:54350453-54350235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
77, 64
               

               
Conread position:
               
924-1140
               

               
Cow position:
               
chr5:63987535-63987320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
77, 39
               

               
Conread position:
               
926-1136
               

               
Cow position:
               
chr5:41545982-41545771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
81, 62
               

               
Conread position:
               
926-1140
               

               
Cow position:
               
chr5:8821101-8820887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
77, 45
               

               
Conread position:
               
926-1140
               

               
Cow position:
               
chr5:28302835-28302617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
76, 56
               

               
Conread position:
               
927-1139
               

               
Cow position:
               
chr5:27411481-27411276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
927-1140
               

               
Cow position:
               
chr5:3771761-3771972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
74, 61
               

               
Conread position:
               
929-1140
               

               
Cow position:
               
chr5:27306223-27306430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
74, 28
               

               
Conread position:
               
929-1140
               

               
Cow position:
               
chr5:66551984-66551770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
75, 61
               

               
Conread position:
               
930-1140
               

               
Cow position:
               
chr5:47323381-47323588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
81, 58
               

               
Conread position:
               
931-1139
               

               
Cow position:
               
chr5:32394518-32394724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
85, 48
               

               
Conread position:
               
932-1087
               

               
Cow position:
               
chr5:34107154-34107308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
68, 56
               

               
Conread position:
               
932-1140
               

               
Cow position:
               
chr5:43402818-43403030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
72, 56
               

               
Conread position:
               
934-1140
               

               
Cow position:
               
chr5:31640340-31640551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
935-1140
               

               
Cow position:
               
chr5:19752226-19752428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
61, 44
               

               
Conread position:
               
935-1140
               

               
Cow position:
               
chr5:69636156-69636350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
940-1127
               

               
Cow position:
               
chr5:60599266-60599091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
941-1140
               

               
Cow position:
               
chr5:29912346-29912546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
64, 30
               

               
Conread position:
               
942-1140
               

               
Cow position:
               
chr5:44848092-44847895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
118, 46
               

               
Conread position:
               
943-1136
               

               
Cow position:
               
chr5:63234897-63234707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
58, 45
               

               
Conread position:
               
947-1140
               

               
Cow position:
               
chr5:26150488-26150295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
74, 41
               

               
Conread position:
               
948-1140
               

               
Cow position:
               
chr5:1461021-1461215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
53, 40
               

               
Conread position:
               
951-1134
               

               
Cow position:
               
chr5:67212293-67212481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
50, 37
               

               
Conread position:
               
951-1135
               

               
Cow position:
               
chr5:58793672-58793486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
50, 40
               

               
Conread position:
               
951-1140
               

               
Cow position:
               
chr5:40109428-40109618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
51, 37
               

               
Conread position:
               
951-1140
               

               
Cow position:
               
chr5:59627037-59626846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
53, 37
               

               
Conread position:
               
951-1140
               

               
Cow position:
               
chr5:63150230-63150043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
65, 21
               

               
Conread position:
               
953-1138
               

               
Cow position:
               
chr5:34624896-34625084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
48, 35
               

               
Conread position:
               
953-1139
               

               
Cow position:
               
chr5:45420195-45420012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
955-1140
               

               
Cow position:
               
chr5:63627584-63627409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
46, 32
               

               
Conread position:
               
956-1129
               

               
Cow position:
               
chr5:66366449-66366624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
57, 30
               

               
Conread position:
               
956-1133
               

               
Cow position:
               
chr5:7193362-7193538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
46, 23
               

               
Conread position:
               
956-1140
               

               
Cow position:
               
chr5:61455787-61455970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
45, 122
               

               
Conread position:
               
957-1140
               

               
Cow position:
               
chr5:17602258-17602079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
18, 8
               

               
Conread position:
               
958-1140
               

               
Cow position:
               
chr5:19813279-19813094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
43, 33
               

               
Conread position:
               
958-1140
               

               
Cow position:
               
chr5:55796017-55795840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
124, 14
               

               
Conread position:
               
958-1140
               

               
Cow position:
               
chr5:56339074-56338895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
56, 13
               

               
Conread position:
               
961-1140
               

               
Cow position:
               
chr5:24136660-24136840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
45, 27
               

               
Conread position:
               
961-1140
               

               
Cow position:
               
chr5:57156367-57156187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
27, 48
               

               
Conread position:
               
962-1117
               

               
Cow position:
               
chr5:43408411-43408255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
40, 27
               

               
Conread position:
               
965-1140
               

               
Cow position:
               
chr5:67118369-67118546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
40, 24
               

               
Conread position:
               
967-1140
               

               
Cow position:
               
chr5:15363833-15364008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
46, 24
               

               
Conread position:
               
968-1117
               

               
Cow position:
               
chr5:63192788-63192638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
36, 20
               

               
Conread position:
               
969-1140
               

               
Cow position:
               
chr5:56517057-56517230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
36, 19
               

               
Conread position:
               
972-1140
               

               
Cow position:
               
chr5:40237171-40237337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
29, 16
               

               
Conread position:
               
972-1140
               

               
Cow position:
               
chr5:69099676-69099846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
31, 14
               

               
Conread position:
               
972-1140
               

               
Cow position:
               
chr5:72006535-72006364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
39, 17
               

               
Conread position:
               
973-1140
               

               
Cow position:
               
chr5:49342090-49341923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
32, 13
               

               
Conread position:
               
973-1140
               

               
Cow position:
               
chr5:56211860-56212031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
30, 15
               

               
Conread position:
               
974-1119
               

               
Cow position:
               
chr5:31052345-31052485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
974-1140
               

               
Cow position:
               
chr5:35982781-35982611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
36, 14
               

               
Conread position:
               
975-1138
               

               
Cow position:
               
chr5:33537829-33537998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
33, 13
               

               
Conread position:
               
975-1140
               

               
Cow position:
               
chr5:20288303-20288137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
25, 13
               

               
Conread position:
               
975-1140
               

               
Cow position:
               
chr5:61102675-61102842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
30, 13
               

               
Conread position:
               
977-1140
               

               
Cow position:
               
chr5:4166607-4166766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
30, 11
               

               
Conread position:
               
977-1140
               

               
Cow position:
               
chr5:22667040-22667197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
36, 11
               

               
Conread position:
               
978-1140
               

               
Cow position:
               
chr5:24069362-24069516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
57, 10
               

               
Conread position:
               
979-1118
               

               
Cow position:
               
chr5:51065496-51065633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
979-1140
               

               
Cow position:
               
chr5:22795178-22795340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
26, 9
               

               
Conread position:
               
979-1140
               

               
Cow position:
               
chr5:57686776-57686611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
22, 9
               

               
Conread position:
               
981-1140
               

               
Cow position:
               
chr5:26549175-26549014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
22, 7
               

               
Conread position:
               
990-1140
               

               
Cow position:
               
chr5:52108292-52108143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
24, 10
               

               
Conread position:
               
990-1140
               

               
Cow position:
               
chr5:61875517-61875663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
11, 46
               

               
Conread position:
               
993-1140
               

               
Cow position:
               
chr5:56334529-56334386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
1000-1140
               

               
Cow position:
               
chr5:58555122-58555263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
1000-1140
               

               
Cow position:
               
chr5:60188978-60189119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
50, 9
               

               
Conread position:
               
1001-1140
               

               
Cow position:
               
chr5:69383243-69383381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
1002-1139
               

               
Cow position:
               
chr5:59627086-59627225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
1002-1140
               

               
Cow position:
               
chr5:45187129-45186994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
1002-1140
               

               
Cow position:
               
chr5:50824579-50824718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
1005-1140
               

               
Cow position:
               
chr5:5847854-5847720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
1005-1140
               

               
Cow position:
               
chr5:9233998-9233862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
1011-1140
               

               
Cow position:
               
chr5:46541058-46540930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
53, 70
               

               
Conread position:
               
1012-1140
               

               
Cow position:
               
chr5:9170583-9170457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
1012-1140
               

               
Cow position:
               
chr5:34915055-34914927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1012-1140
               

               
Cow position:
               
chr5:39035778-39035904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
1012-1140
               

               
Cow position:
               
chr5:45126649-45126778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
1015-1140
               

               
Cow position:
               
chr5:4267671-4267796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1015-1140
               

               
Cow position:
               
chr5:45574364-45574239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1015-1140
               

               
Cow position:
               
chr5:49501823-49501698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1016-1137
               

               
Cow position:
               
chr5:26253171-26253050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1020-1140
               

               
Cow position:
               
chr5:12169762-12169643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
1025-1138
               

               
Cow position:
               
chr5:35647354-35647467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1025-1140
               

               
Cow position:
               
chr5:38168905-38169021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
1028-1140
               

               
Cow position:
               
chr5:2240975-2240865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
1028-1140
               

               
Cow position:
               
chr5:55942365-55942253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1028-1140
               

               
Cow position:
               
chr5:75228185-75228073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1029-1140
               

               
Cow position:
               
chr5:26147606-26147717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1036-1140
               

               
Cow position:
               
chr5:35190132-35190236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1037-1140
               

               
Cow position:
               
chr5:37842256-37842153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1040-1140
               

               
Cow position:
               
chr5:34288224-34288127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
101
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
1045-1140
               

               
Cow position:
               
chr5:8736248-8736154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
96
               

               
Alignm identity:
               
81
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
45, 0
               
Show alignments to all cow chromosomes.