Cow genome map
| Conread name: | Ss1.1-Thy1-THY010064A03.5 |
| Conread position: | 1-426 |
| Cow position: | chr13:48359092-48359508 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 273 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 83, 61 |
| Conread position: | 1-508 |
| Cow position: | chr13:17330301-17329817 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 384, 7 |
| Conread position: | 6-624 |
| Cow position: | chr13:31732425-31731817 (view UCSC Genome Browser custom track) |
| Alignm length: | 637 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 58 |
| Conread position: | 39-764 |
| Cow position: | chr13:679342-680060 (view UCSC Genome Browser custom track) |
| Alignm length: | 747 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 333, 83 |
| Conread position: | 40-507 |
| Cow position: | chr13:46103966-46104399 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 313 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 210, 82 |
| Conread position: | 46-413 |
| Cow position: | chr13:15449594-15449251 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 255 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 151, 19 |
| Conread position: | 51-492 |
| Cow position: | chr13:28788466-28788878 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 286 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 14, 53 |
| Conread position: | 53-623 |
| Cow position: | chr13:14523569-14523012 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 326, 79 |
| Conread position: | 53-723 |
| Cow position: | chr13:21838628-21837973 (view UCSC Genome Browser custom track) |
| Alignm length: | 696 |
| Alignm identity: | 476 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 288, 26 |
| Conread position: | 53-784 |
| Cow position: | chr13:3652680-3651957 (view UCSC Genome Browser custom track) |
| Alignm length: | 756 |
| Alignm identity: | 508 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 72 |
| Conread position: | 53-800 |
| Cow position: | chr13:34343485-34344234 (view UCSC Genome Browser custom track) |
| Alignm length: | 770 |
| Alignm identity: | 527 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 324, 66 |
| Conread position: | 54-224 |
| Cow position: | chr13:31610737-31610572 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 54-224 |
| Cow position: | chr13:34040752-34040591 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 54-237 |
| Cow position: | chr13:6358704-6358880 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 54-237 |
| Cow position: | chr13:21058249-21058425 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 54-237 |
| Cow position: | chr13:32548067-32548244 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 54-315 |
| Cow position: | chr13:22183752-22183511 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 181 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 54-324 |
| Cow position: | chr13:32923553-32923303 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 54-393 |
| Cow position: | chr13:34939015-34939335 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 237 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 54-451 |
| Cow position: | chr13:3760049-3759673 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 320, 66 |
| Conread position: | 54-508 |
| Cow position: | chr13:5500419-5499987 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 320, 66 |
| Conread position: | 54-670 |
| Cow position: | chr13:16921038-16921647 (view UCSC Genome Browser custom track) |
| Alignm length: | 636 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 320, 68 |
| Conread position: | 54-698 |
| Cow position: | chr13:57025430-57026076 (view UCSC Genome Browser custom track) |
| Alignm length: | 671 |
| Alignm identity: | 447 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 47 |
| Conread position: | 54-717 |
| Cow position: | chr13:11797127-11796477 (view UCSC Genome Browser custom track) |
| Alignm length: | 683 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 69 |
| Conread position: | 54-724 |
| Cow position: | chr13:18331528-18330863 (view UCSC Genome Browser custom track) |
| Alignm length: | 688 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 326, 65 |
| Conread position: | 54-748 |
| Cow position: | chr13:20540254-20539587 (view UCSC Genome Browser custom track) |
| Alignm length: | 710 |
| Alignm identity: | 474 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 324, 18 |
| Conread position: | 54-779 |
| Cow position: | chr13:14401528-14400805 (view UCSC Genome Browser custom track) |
| Alignm length: | 755 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 64 |
| Conread position: | 54-781 |
| Cow position: | chr13:11388785-11389509 (view UCSC Genome Browser custom track) |
| Alignm length: | 753 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 320, 66 |
| Conread position: | 54-784 |
| Cow position: | chr13:4485441-4486159 (view UCSC Genome Browser custom track) |
| Alignm length: | 751 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 430, 34 |
| Conread position: | 54-784 |
| Cow position: | chr13:13326503-13327248 (view UCSC Genome Browser custom track) |
| Alignm length: | 762 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 241, 68 |
| Conread position: | 54-784 |
| Cow position: | chr13:23455015-23455744 (view UCSC Genome Browser custom track) |
| Alignm length: | 757 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 320, 66 |
| Conread position: | 54-784 |
| Cow position: | chr13:30304777-30305499 (view UCSC Genome Browser custom track) |
| Alignm length: | 754 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 329, 42 |
| Conread position: | 54-784 |
| Cow position: | chr13:33524376-33523651 (view UCSC Genome Browser custom track) |
| Alignm length: | 754 |
| Alignm identity: | 505 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 320, 63 |
| Conread position: | 54-784 |
| Cow position: | chr13:49975256-49975980 (view UCSC Genome Browser custom track) |
| Alignm length: | 753 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 320, 44 |
| Conread position: | 54-784 |
| Cow position: | chr13:50111038-50111774 (view UCSC Genome Browser custom track) |
| Alignm length: | 757 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 287, 66 |
| Conread position: | 54-784 |
| Cow position: | chr13:54239861-54239121 (view UCSC Genome Browser custom track) |
| Alignm length: | 768 |
| Alignm identity: | 530 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 318, 62 |
| Conread position: | 54-790 |
| Cow position: | chr13:49613956-49613225 (view UCSC Genome Browser custom track) |
| Alignm length: | 760 |
| Alignm identity: | 521 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 318, 68 |
| Conread position: | 54-800 |
| Cow position: | chr13:4942965-4943706 (view UCSC Genome Browser custom track) |
| Alignm length: | 771 |
| Alignm identity: | 521 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 318, 65 |
| Conread position: | 54-800 |
| Cow position: | chr13:6666559-6665813 (view UCSC Genome Browser custom track) |
| Alignm length: | 772 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 332, 59 |
| Conread position: | 54-800 |
| Cow position: | chr13:15558920-15559656 (view UCSC Genome Browser custom track) |
| Alignm length: | 772 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 318, 65 |
| Conread position: | 54-800 |
| Cow position: | chr13:15922878-15922137 (view UCSC Genome Browser custom track) |
| Alignm length: | 768 |
| Alignm identity: | 529 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 317, 64 |
| Conread position: | 54-800 |
| Cow position: | chr13:19636725-19637466 (view UCSC Genome Browser custom track) |
| Alignm length: | 768 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 255, 65 |
| Conread position: | 54-800 |
| Cow position: | chr13:31729326-31728577 (view UCSC Genome Browser custom track) |
| Alignm length: | 775 |
| Alignm identity: | 523 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 65 |
| Conread position: | 54-800 |
| Cow position: | chr13:33334741-33334027 (view UCSC Genome Browser custom track) |
| Alignm length: | 763 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 47 |
| Conread position: | 54-801 |
| Cow position: | chr13:13901444-13902183 (view UCSC Genome Browser custom track) |
| Alignm length: | 770 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 318, 65 |
| Conread position: | 55-785 |
| Cow position: | chr13:47575669-47576398 (view UCSC Genome Browser custom track) |
| Alignm length: | 758 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 174 |
| Conread position: | 56-376 |
| Cow position: | chr13:32154558-32154244 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 174, 66 |
| Conread position: | 56-510 |
| Cow position: | chr13:35758860-35759295 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 63 |
| Conread position: | 59-409 |
| Cow position: | chr13:59979677-59979343 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 315, 63 |
| Conread position: | 59-768 |
| Cow position: | chr13:53552947-53552250 (view UCSC Genome Browser custom track) |
| Alignm length: | 713 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 20 |
| Conread position: | 60-671 |
| Cow position: | chr13:34031179-34031777 (view UCSC Genome Browser custom track) |
| Alignm length: | 625 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 312, 62 |
| Conread position: | 60-750 |
| Cow position: | chr13:23404892-23404206 (view UCSC Genome Browser custom track) |
| Alignm length: | 711 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 289, 62 |
| Conread position: | 61-201 |
| Cow position: | chr13:32983757-32983622 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 61-474 |
| Cow position: | chr13:1634682-1635062 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 285 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 338, 75 |
| Conread position: | 61-712 |
| Cow position: | chr13:16252930-16252290 (view UCSC Genome Browser custom track) |
| Alignm length: | 669 |
| Alignm identity: | 455 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 311, 36 |
| Conread position: | 61-721 |
| Cow position: | chr13:5624162-5623510 (view UCSC Genome Browser custom track) |
| Alignm length: | 677 |
| Alignm identity: | 446 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 242, 65 |
| Conread position: | 61-767 |
| Cow position: | chr13:11763052-11762348 (view UCSC Genome Browser custom track) |
| Alignm length: | 735 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 59 |
| Conread position: | 61-800 |
| Cow position: | chr13:15280205-15279469 (view UCSC Genome Browser custom track) |
| Alignm length: | 766 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 311, 58 |
| Conread position: | 61-800 |
| Cow position: | chr13:32735605-32734866 (view UCSC Genome Browser custom track) |
| Alignm length: | 769 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 58 |
| Conread position: | 62-443 |
| Cow position: | chr13:54311608-54311969 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 270 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 310, 70 |
| Conread position: | 62-447 |
| Cow position: | chr13:21603301-21603660 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 254 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 62-800 |
| Cow position: | chr13:34050289-34051021 (view UCSC Genome Browser custom track) |
| Alignm length: | 759 |
| Alignm identity: | 502 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 63 |
| Conread position: | 64-691 |
| Cow position: | chr13:42090104-42089483 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 60 |
| Conread position: | 64-800 |
| Cow position: | chr13:31508496-31509230 (view UCSC Genome Browser custom track) |
| Alignm length: | 760 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 317, 56 |
| Conread position: | 65-212 |
| Cow position: | chr13:21907595-21907445 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 65-784 |
| Cow position: | chr13:43590898-43591580 (view UCSC Genome Browser custom track) |
| Alignm length: | 731 |
| Alignm identity: | 482 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 304, 21 |
| Conread position: | 66-753 |
| Cow position: | chr13:34906931-34906252 (view UCSC Genome Browser custom track) |
| Alignm length: | 713 |
| Alignm identity: | 464 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 60 |
| Conread position: | 68-800 |
| Cow position: | chr13:36348553-36347798 (view UCSC Genome Browser custom track) |
| Alignm length: | 766 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 47 |
| Conread position: | 72-784 |
| Cow position: | chr13:17310014-17310724 (view UCSC Genome Browser custom track) |
| Alignm length: | 738 |
| Alignm identity: | 495 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 302, 48 |
| Conread position: | 83-416 |
| Cow position: | chr13:60650324-60650636 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 25, 37 |
| Conread position: | 84-800 |
| Cow position: | chr13:34510196-34509489 (view UCSC Genome Browser custom track) |
| Alignm length: | 743 |
| Alignm identity: | 504 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 288, 38 |
| Conread position: | 85-438 |
| Cow position: | chr13:30239945-30240279 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 341, 37 |
| Conread position: | 96-779 |
| Cow position: | chr13:1048412-1047748 (view UCSC Genome Browser custom track) |
| Alignm length: | 699 |
| Alignm identity: | 434 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 278, 20 |
| Conread position: | 104-709 |
| Cow position: | chr13:10373691-10374294 (view UCSC Genome Browser custom track) |
| Alignm length: | 636 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 16 |
| Conread position: | 106-784 |
| Cow position: | chr13:30470739-30470070 (view UCSC Genome Browser custom track) |
| Alignm length: | 696 |
| Alignm identity: | 458 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 274, 120 |
| Conread position: | 117-784 |
| Cow position: | chr13:50192007-50191320 (view UCSC Genome Browser custom track) |
| Alignm length: | 701 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 106 |
| Conread position: | 119-472 |
| Cow position: | chr13:9299294-9299641 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 18 |
| Conread position: | 119-784 |
| Cow position: | chr13:562750-562082 (view UCSC Genome Browser custom track) |
| Alignm length: | 689 |
| Alignm identity: | 454 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 255, 107 |
| Conread position: | 125-800 |
| Cow position: | chr13:34869609-34870283 (view UCSC Genome Browser custom track) |
| Alignm length: | 705 |
| Alignm identity: | 480 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 231, 11 |
| Conread position: | 128-793 |
| Cow position: | chr13:22479648-22480316 (view UCSC Genome Browser custom track) |
| Alignm length: | 693 |
| Alignm identity: | 433 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 46, 55 |
| Conread position: | 129-485 |
| Cow position: | chr13:17481511-17481160 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 245 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 143, 90 |
| Conread position: | 130-753 |
| Cow position: | chr13:20573443-20572821 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 96 |
| Conread position: | 131-510 |
| Cow position: | chr13:26408485-26408864 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 255 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 119, 6 |
| Conread position: | 136-675 |
| Cow position: | chr13:16816728-16817260 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 344 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 355, 90 |
| Conread position: | 145-449 |
| Cow position: | chr13:43149276-43149561 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 219 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 227, 5 |
| Conread position: | 148-614 |
| Cow position: | chr13:9681162-9681604 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 308 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 224, 78 |
| Conread position: | 149-410 |
| Cow position: | chr13:24667244-24666995 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 192 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 223, 77 |
| Conread position: | 150-480 |
| Cow position: | chr13:24104640-24104955 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 220 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 100, 32 |
| Conread position: | 158-497 |
| Cow position: | chr13:30088047-30088372 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 158, 67 |
| Conread position: | 166-800 |
| Cow position: | chr13:21400522-21401166 (view UCSC Genome Browser custom track) |
| Alignm length: | 671 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 54 |
| Conread position: | 182-784 |
| Cow position: | chr13:34040654-34040036 (view UCSC Genome Browser custom track) |
| Alignm length: | 631 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 23 |
| Conread position: | 185-784 |
| Cow position: | chr13:25381096-25381708 (view UCSC Genome Browser custom track) |
| Alignm length: | 624 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 45 |
| Conread position: | 247-730 |
| Cow position: | chr13:44651138-44650668 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 317 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 25, 30 |
| Conread position: | 249-438 |
| Cow position: | chr13:60424480-60424667 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 48, 90 |
| Conread position: | 249-472 |
| Cow position: | chr13:21880139-21879922 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 123, 93 |
| Conread position: | 249-621 |
| Cow position: | chr13:5718964-5719342 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 260 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 123, 70 |
| Conread position: | 249-623 |
| Cow position: | chr13:12634669-12635048 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 257 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 121, 92 |
| Conread position: | 249-714 |
| Cow position: | chr13:31610043-31609561 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 168 |
| Conread position: | 249-763 |
| Cow position: | chr13:21698033-21698556 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 161 |
| Conread position: | 249-784 |
| Cow position: | chr13:35538918-35539471 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 161 |
| Conread position: | 249-793 |
| Cow position: | chr13:36104906-36105452 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 365 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 90, 155 |
| Conread position: | 249-800 |
| Cow position: | chr13:7049404-7049962 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 167 |
| Conread position: | 249-800 |
| Cow position: | chr13:54144566-54145125 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 85 |
| Conread position: | 252-411 |
| Cow position: | chr13:21907431-21907270 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 253-751 |
| Cow position: | chr13:49194957-49194445 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 334 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 82, 155 |
| Conread position: | 254-657 |
| Cow position: | chr13:12566696-12566292 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 155 |
| Conread position: | 254-790 |
| Cow position: | chr13:4735039-4735588 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 48 |
| Conread position: | 263-800 |
| Cow position: | chr13:32548528-32549080 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 147 |
| Conread position: | 263-804 |
| Cow position: | chr13:41338878-41338334 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 149 |
| Conread position: | 273-753 |
| Cow position: | chr13:32983618-32983123 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 300 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 82, 86 |
| Conread position: | 285-462 |
| Cow position: | chr13:14176674-14176499 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 5, 98 |
| Conread position: | 297-764 |
| Cow position: | chr13:60647791-60647296 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 331 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 7, 14 |
| Conread position: | 298-754 |
| Cow position: | chr13:8069348-8068877 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 39 |
| Conread position: | 300-784 |
| Cow position: | chr13:11827917-11827419 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 116 |
| Conread position: | 302-712 |
| Cow position: | chr13:19565532-19565945 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 284 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 93, 107 |
| Conread position: | 304-649 |
| Cow position: | chr13:47538391-47538737 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 170, 24 |
| Conread position: | 304-672 |
| Cow position: | chr13:20767708-20768091 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 246 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 312-597 |
| Cow position: | chr13:49494369-49494084 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 61, 93 |
| Conread position: | 312-800 |
| Cow position: | chr13:3313455-3313947 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 347 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 60, 80 |
| Conread position: | 322-753 |
| Cow position: | chr13:19044733-19044289 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 301 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 71, 93 |
| Conread position: | 326-790 |
| Cow position: | chr13:4733366-4733844 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 324 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 48, 84 |
| Conread position: | 327-472 |
| Cow position: | chr13:51768646-51768792 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 24, 100 |
| Conread position: | 340-800 |
| Cow position: | chr13:61953081-61953559 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 89 |
| Conread position: | 341-784 |
| Cow position: | chr13:36867757-36868214 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 295 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 15, 76 |
| Conread position: | 361-509 |
| Cow position: | chr13:34324113-34323960 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 13, 30 |
| Conread position: | 374-684 |
| Cow position: | chr13:54311977-54312303 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 221 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 21, 51 |
| Conread position: | 387-800 |
| Cow position: | chr13:47368069-47368488 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 28 |
| Conread position: | 405-790 |
| Cow position: | chr13:3023365-3022969 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 252 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 26, 14 |
| Conread position: | 407-800 |
| Cow position: | chr13:30653373-30652964 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 280 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 23, 14 |
| Conread position: | 427-784 |
| Cow position: | chr13:3481927-3481557 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 245 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 59, 306 |
| Conread position: | 501-796 |
| Cow position: | chr13:669261-669563 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 49, 30 |
| Conread position: | 516-766 |
| Cow position: | chr13:33169737-33169488 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 109, 14 |
| Conread position: | 534-796 |
| Cow position: | chr13:6440914-6441176 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 188 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 16, 75 |
| Conread position: | 535-717 |
| Cow position: | chr13:32777054-32776861 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 535-800 |
| Cow position: | chr13:53544117-53543853 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 184 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 15, 191 |
| Conread position: | 554-800 |
| Cow position: | chr13:30036214-30035965 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 180 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 71, 153 |
| Conread position: | 566-800 |
| Cow position: | chr13:1142397-1142154 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 65, 205 |
Show alignments to all cow chromosomes.