Cow genome map

Conread name: Ss1.1-Thy1-THY010064A03.5

Conread position: 31-511
Cow position:
Alignm length: 486
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 195

Conread position: 45-800
Cow position:
Alignm length: 790
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 18

Conread position: 46-201
Cow position:
Alignm length: 158
Alignm identity: 116
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 15, 88

Conread position: 46-690
Cow position:
Alignm length: 671
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 174

Conread position: 46-764
Cow position:
Alignm length: 741
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 75

Conread position: 46-800
Cow position:
Alignm length: 780
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 326, 31

Conread position: 51-506
Cow position:
Alignm length: 461
Alignm identity: 314
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 344, 44

Conread position: 52-784
Cow position:
Alignm length: 753
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 322, 68

Conread position: 53-411
Cow position:
Alignm length: 362
Alignm identity: 236
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 40, 69

Conread position: 53-443
Cow position:
Alignm length: 395
Alignm identity: 271
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 9, 75

Conread position: 53-764
Cow position:
Alignm length: 735
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 321, 67

Conread position: 53-784
Cow position:
Alignm length: 767
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 321, 67

Conread position: 53-784
Cow position:
Alignm length: 751
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 45

Conread position: 53-784
Cow position:
Alignm length: 750
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 333, 69

Conread position: 53-800
Cow position:
Alignm length: 767
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 319, 26

Conread position: 54-203
Cow position:
Alignm length: 150
Alignm identity: 111
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 68, 0

Conread position: 54-207
Cow position:
Alignm length: 155
Alignm identity: 118
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 149, 67

Conread position: 54-224
Cow position:
Alignm length: 171
Alignm identity: 127
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 66, 0

Conread position: 54-237
Cow position:
Alignm length: 184
Alignm identity: 134
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 65, 0

Conread position: 54-406
Cow position:
Alignm length: 355
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 323, 32

Conread position: 54-415
Cow position:
Alignm length: 375
Alignm identity: 257
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 128, 60

Conread position: 54-436
Cow position:
Alignm length: 385
Alignm identity: 264
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 327, 53

Conread position: 54-440
Cow position:
Alignm length: 389
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 72

Conread position: 54-453
Cow position:
Alignm length: 403
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 65

Conread position: 54-480
Cow position:
Alignm length: 429
Alignm identity: 288
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 326, 73

Conread position: 54-491
Cow position:
Alignm length: 440
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 65

Conread position: 54-492
Cow position:
Alignm length: 440
Alignm identity: 292
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 314, 73

Conread position: 54-617
Cow position:
Alignm length: 574
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 326, 67

Conread position: 54-624
Cow position:
Alignm length: 584
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 65

Conread position: 54-639
Cow position:
Alignm length: 600
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 66

Conread position: 54-647
Cow position:
Alignm length: 608
Alignm identity: 394
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 9, 92

Conread position: 54-670
Cow position:
Alignm length: 632
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 326, 62

Conread position: 54-752
Cow position:
Alignm length: 725
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 55

Conread position: 54-752
Cow position:
Alignm length: 724
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 65

Conread position: 54-753
Cow position:
Alignm length: 724
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 65

Conread position: 54-764
Cow position:
Alignm length: 731
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 73

Conread position: 54-764
Cow position:
Alignm length: 731
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 66

Conread position: 54-778
Cow position:
Alignm length: 747
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 65

Conread position: 54-784
Cow position:
Alignm length: 760
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 66

Conread position: 54-784
Cow position:
Alignm length: 754
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 66

Conread position: 54-790
Cow position:
Alignm length: 762
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 68

Conread position: 54-800
Cow position:
Alignm length: 771
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 65

Conread position: 54-800
Cow position:
Alignm length: 774
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 61

Conread position: 54-800
Cow position:
Alignm length: 769
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 319, 35

Conread position: 54-800
Cow position:
Alignm length: 772
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 53

Conread position: 54-800
Cow position:
Alignm length: 773
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 67

Conread position: 54-800
Cow position:
Alignm length: 777
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 70

Conread position: 54-800
Cow position:
Alignm length: 764
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 439, 66

Conread position: 55-195
Cow position:
Alignm length: 143
Alignm identity: 112
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 7, 0

Conread position: 55-443
Cow position:
Alignm length: 393
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 62

Conread position: 56-410
Cow position:
Alignm length: 356
Alignm identity: 244
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 339, 60

Conread position: 56-528
Cow position:
Alignm length: 484
Alignm identity: 318
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 250, 63

Conread position: 59-776
Cow position:
Alignm length: 730
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 336, 20

Conread position: 59-795
Cow position:
Alignm length: 764
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 60

Conread position: 59-800
Cow position:
Alignm length: 760
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 63

Conread position: 59-800
Cow position:
Alignm length: 767
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 57

Conread position: 61-223
Cow position:
Alignm length: 163
Alignm identity: 121
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 61-486
Cow position:
Alignm length: 428
Alignm identity: 291
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 315, 58

Conread position: 61-492
Cow position:
Alignm length: 434
Alignm identity: 292
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 334, 46

Conread position: 61-617
Cow position:
Alignm length: 571
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 61

Conread position: 61-691
Cow position:
Alignm length: 650
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 311, 51

Conread position: 61-790
Cow position:
Alignm length: 753
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 311, 48

Conread position: 62-406
Cow position:
Alignm length: 346
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 332, 54

Conread position: 62-508
Cow position:
Alignm length: 453
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 58

Conread position: 62-510
Cow position:
Alignm length: 456
Alignm identity: 306
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 313, 60

Conread position: 62-763
Cow position:
Alignm length: 722
Alignm identity: 460
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 32, 37

Conread position: 64-223
Cow position:
Alignm length: 161
Alignm identity: 121
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 147, 59

Conread position: 65-800
Cow position:
Alignm length: 761
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 54

Conread position: 66-429
Cow position:
Alignm length: 366
Alignm identity: 244
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 306, 50

Conread position: 68-784
Cow position:
Alignm length: 745
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 161

Conread position: 68-786
Cow position:
Alignm length: 745
Alignm identity: 472
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 30, 84

Conread position: 69-610
Cow position:
Alignm length: 550
Alignm identity: 353
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 401, 67

Conread position: 72-690
Cow position:
Alignm length: 636
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 48

Conread position: 72-753
Cow position:
Alignm length: 718
Alignm identity: 460
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 18, 56

Conread position: 73-497
Cow position:
Alignm length: 434
Alignm identity: 277
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 162, 97

Conread position: 73-510
Cow position:
Alignm length: 439
Alignm identity: 294
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 312, 47

Conread position: 76-629
Cow position:
Alignm length: 569
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 43

Conread position: 83-754
Cow position:
Alignm length: 699
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 303, 39

Conread position: 84-800
Cow position:
Alignm length: 744
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 42

Conread position: 86-752
Cow position:
Alignm length: 686
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 297, 24

Conread position: 104-492
Cow position:
Alignm length: 392
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 18

Conread position: 116-766
Cow position:
Alignm length: 679
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 20

Conread position: 121-800
Cow position:
Alignm length: 704
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 105

Conread position: 124-800
Cow position:
Alignm length: 704
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 102

Conread position: 126-671
Cow position:
Alignm length: 564
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 100

Conread position: 128-603
Cow position:
Alignm length: 492
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 103

Conread position: 138-379
Cow position:
Alignm length: 242
Alignm identity: 170
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 88, 0

Conread position: 138-800
Cow position:
Alignm length: 682
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 88

Conread position: 147-492
Cow position:
Alignm length: 348
Alignm identity: 231
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 148, 79

Conread position: 150-472
Cow position:
Alignm length: 323
Alignm identity: 217
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 76, 0

Conread position: 150-638
Cow position:
Alignm length: 497
Alignm identity: 320
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 222, 79

Conread position: 151-751
Cow position:
Alignm length: 628
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 76

Conread position: 157-516
Cow position:
Alignm length: 365
Alignm identity: 249
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 218, 57

Conread position: 160-705
Cow position:
Alignm length: 566
Alignm identity: 367
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 212, 19

Conread position: 162-697
Cow position:
Alignm length: 550
Alignm identity: 365
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 245, 63

Conread position: 163-420
Cow position:
Alignm length: 260
Alignm identity: 171
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 220, 43

Conread position: 163-735
Cow position:
Alignm length: 592
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 63

Conread position: 198-639
Cow position:
Alignm length: 457
Alignm identity: 294
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 196, 209

Conread position: 221-659
Cow position:
Alignm length: 449
Alignm identity: 296
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 151, 32

Conread position: 237-796
Cow position:
Alignm length: 580
Alignm identity: 374
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 158, 71

Conread position: 248-479
Cow position:
Alignm length: 233
Alignm identity: 163
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 199, 54

Conread position: 249-421
Cow position:
Alignm length: 174
Alignm identity: 142
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 145, 0

Conread position: 249-510
Cow position:
Alignm length: 269
Alignm identity: 185
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 81, 20

Conread position: 249-510
Cow position:
Alignm length: 269
Alignm identity: 194
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 120, 163

Conread position: 249-650
Cow position:
Alignm length: 414
Alignm identity: 273
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 127, 160

Conread position: 249-667
Cow position:
Alignm length: 432
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 34

Conread position: 249-790
Cow position:
Alignm length: 557
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 69

Conread position: 252-492
Cow position:
Alignm length: 242
Alignm identity: 161
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 195, 14

Conread position: 252-693
Cow position:
Alignm length: 461
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 49

Conread position: 254-492
Cow position:
Alignm length: 245
Alignm identity: 170
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 9, 52

Conread position: 254-800
Cow position:
Alignm length: 563
Alignm identity: 364
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 118, 76

Conread position: 258-717
Cow position:
Alignm length: 482
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 152

Conread position: 263-707
Cow position:
Alignm length: 459
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 46

Conread position: 263-784
Cow position:
Alignm length: 545
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 23

Conread position: 263-784
Cow position:
Alignm length: 538
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 45

Conread position: 264-800
Cow position:
Alignm length: 559
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 33

Conread position: 266-800
Cow position:
Alignm length: 551
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 128

Conread position: 281-503
Cow position:
Alignm length: 226
Alignm identity: 167
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 93, 129

Conread position: 288-482
Cow position:
Alignm length: 197
Alignm identity: 141
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 84, 112

Conread position: 288-704
Cow position:
Alignm length: 439
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 45

Conread position: 289-800
Cow position:
Alignm length: 540
Alignm identity: 347
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 39, 10

Conread position: 296-764
Cow position:
Alignm length: 489
Alignm identity: 312
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 21, 120

Conread position: 298-787
Cow position:
Alignm length: 507
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 110

Conread position: 299-748
Cow position:
Alignm length: 471
Alignm identity: 309
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 77, 47

Conread position: 302-799
Cow position:
Alignm length: 518
Alignm identity: 336
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 84, 106

Conread position: 305-800
Cow position:
Alignm length: 521
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 105

Conread position: 306-778
Cow position:
Alignm length: 489
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 121

Conread position: 314-508
Cow position:
Alignm length: 201
Alignm identity: 151
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 60, 96

Conread position: 321-713
Cow position:
Alignm length: 409
Alignm identity: 276
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 74, 88

Conread position: 337-622
Cow position:
Alignm length: 298
Alignm identity: 204
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 46, 10

Conread position: 338-784
Cow position:
Alignm length: 475
Alignm identity: 317
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 42, 78

Conread position: 339-784
Cow position:
Alignm length: 473
Alignm identity: 314
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 41, 61

Conread position: 340-796
Cow position:
Alignm length: 471
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 75

Conread position: 358-784
Cow position:
Alignm length: 450
Alignm identity: 292
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 16, 8

Conread position: 394-784
Cow position:
Alignm length: 412
Alignm identity: 268
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 27, 158

Conread position: 394-800
Cow position:
Alignm length: 421
Alignm identity: 272
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 81, 22

Conread position: 412-784
Cow position:
Alignm length: 391
Alignm identity: 250
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 19, 7

Conread position: 413-784
Cow position:
Alignm length: 394
Alignm identity: 264
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 80, 128

Conread position: 414-753
Cow position:
Alignm length: 362
Alignm identity: 245
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 80, 127

Conread position: 439-800
Cow position:
Alignm length: 383
Alignm identity: 262
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 8, 122

Conread position: 501-800
Cow position:
Alignm length: 313
Alignm identity: 209
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 55, 38

Show alignments to all cow chromosomes.