Cow genome map

Conread name: Ss1.1-Thy1-THY010064A03.5

Conread position: 8-800
Cow position: chr15:6385158-6384358 (view UCSC Genome Browser custom track)
Alignm length: 825
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 118

Conread position: 27-443
Cow position: chr15:36144032-36144428 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 94

Conread position: 46-697
Cow position: chr15:4107869-4107239 (view UCSC Genome Browser custom track)
Alignm length: 670
Alignm identity: 425
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 19, 71

Conread position: 46-800
Cow position: chr15:29969881-29969163 (view UCSC Genome Browser custom track)
Alignm length: 767
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 36

Conread position: 52-447
Cow position: chr15:20849777-20849398 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 257
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 325, 18

Conread position: 52-454
Cow position: chr15:24515300-24514914 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 253
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 323, 11

Conread position: 53-363
Cow position: chr15:4652829-4653120 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 215
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 66, 0

Conread position: 53-410
Cow position: chr15:3834544-3834210 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 244
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 300, 60

Conread position: 53-508
Cow position: chr15:31859504-31859055 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 69

Conread position: 53-510
Cow position: chr15:42938243-42938680 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 321, 66

Conread position: 53-766
Cow position: chr15:4916644-4917358 (view UCSC Genome Browser custom track)
Alignm length: 741
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 68

Conread position: 53-784
Cow position: chr15:17397196-17397902 (view UCSC Genome Browser custom track)
Alignm length: 745
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 321, 69

Conread position: 53-785
Cow position: chr15:6154476-6153749 (view UCSC Genome Browser custom track)
Alignm length: 760
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 57

Conread position: 53-800
Cow position: chr15:15345655-15344909 (view UCSC Genome Browser custom track)
Alignm length: 776
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 319, 66

Conread position: 54-231
Cow position: chr15:24795270-24795445 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 82, 0

Conread position: 54-246
Cow position: chr15:8810864-8810678 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 145
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 67, 0

Conread position: 54-344
Cow position: chr15:53299908-53300180 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 199
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 68, 0

Conread position: 54-349
Cow position: chr15:6562040-6562315 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 209
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 68, 0

Conread position: 54-379
Cow position: chr15:107454-107763 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 68

Conread position: 54-389
Cow position: chr15:23667380-23667062 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 68

Conread position: 54-406
Cow position: chr15:3259868-3259534 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 244
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 318, 65

Conread position: 54-411
Cow position: chr15:5981811-5982158 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 68

Conread position: 54-411
Cow position: chr15:11292986-11292648 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 248
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 318, 63

Conread position: 54-453
Cow position: chr15:17036206-17035834 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 65

Conread position: 54-454
Cow position: chr15:368213-367826 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 270
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 67, 83

Conread position: 54-472
Cow position: chr15:3890357-3890749 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 66

Conread position: 54-482
Cow position: chr15:7546326-7546728 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 291
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 320, 62

Conread position: 54-492
Cow position: chr15:1668896-1669309 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 292
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 262, 5

Conread position: 54-508
Cow position: chr15:4080782-4080336 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 66

Conread position: 54-508
Cow position: chr15:4198214-4198652 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 66

Conread position: 54-617
Cow position: chr15:4951498-4952050 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 27

Conread position: 54-671
Cow position: chr15:580882-581480 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 341, 65

Conread position: 54-704
Cow position: chr15:42319362-42318704 (view UCSC Genome Browser custom track)
Alignm length: 673
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 216

Conread position: 54-714
Cow position: chr15:6382713-6382044 (view UCSC Genome Browser custom track)
Alignm length: 687
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 18

Conread position: 54-717
Cow position: chr15:7262068-7262722 (view UCSC Genome Browser custom track)
Alignm length: 684
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 67

Conread position: 54-717
Cow position: chr15:19736602-19735932 (view UCSC Genome Browser custom track)
Alignm length: 693
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 42

Conread position: 54-764
Cow position: chr15:18266312-18265603 (view UCSC Genome Browser custom track)
Alignm length: 733
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 66

Conread position: 54-779
Cow position: chr15:2013969-2014674 (view UCSC Genome Browser custom track)
Alignm length: 745
Alignm identity: 473
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 72, 84

Conread position: 54-784
Cow position: chr15:2078102-2078813 (view UCSC Genome Browser custom track)
Alignm length: 751
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 56

Conread position: 54-784
Cow position: chr15:2646200-2645467 (view UCSC Genome Browser custom track)
Alignm length: 757
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 84

Conread position: 54-784
Cow position: chr15:5010179-5009457 (view UCSC Genome Browser custom track)
Alignm length: 754
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 72

Conread position: 54-784
Cow position: chr15:7564451-7565181 (view UCSC Genome Browser custom track)
Alignm length: 755
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 68

Conread position: 54-784
Cow position: chr15:12364880-12365587 (view UCSC Genome Browser custom track)
Alignm length: 751
Alignm identity: 469
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 318, 73

Conread position: 54-784
Cow position: chr15:17075975-17075241 (view UCSC Genome Browser custom track)
Alignm length: 759
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 324, 66

Conread position: 54-784
Cow position: chr15:32492429-32491710 (view UCSC Genome Browser custom track)
Alignm length: 755
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 48

Conread position: 54-784
Cow position: chr15:32712661-32713385 (view UCSC Genome Browser custom track)
Alignm length: 756
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 316, 66

Conread position: 54-784
Cow position: chr15:33122833-33123561 (view UCSC Genome Browser custom track)
Alignm length: 760
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 299, 66

Conread position: 54-784
Cow position: chr15:35751852-35751116 (view UCSC Genome Browser custom track)
Alignm length: 757
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 173

Conread position: 54-784
Cow position: chr15:42531372-42532100 (view UCSC Genome Browser custom track)
Alignm length: 757
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 67

Conread position: 54-790
Cow position: chr15:4947958-4948690 (view UCSC Genome Browser custom track)
Alignm length: 764
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 53

Conread position: 54-790
Cow position: chr15:16190318-16189584 (view UCSC Genome Browser custom track)
Alignm length: 762
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 66

Conread position: 54-790
Cow position: chr15:25205553-25204821 (view UCSC Genome Browser custom track)
Alignm length: 765
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 67

Conread position: 54-790
Cow position: chr15:50148785-50149507 (view UCSC Genome Browser custom track)
Alignm length: 762
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 341, 66

Conread position: 54-800
Cow position: chr15:4726656-4727401 (view UCSC Genome Browser custom track)
Alignm length: 772
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 65

Conread position: 54-800
Cow position: chr15:6552327-6551568 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 160

Conread position: 54-800
Cow position: chr15:12419253-12418514 (view UCSC Genome Browser custom track)
Alignm length: 769
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 65

Conread position: 54-800
Cow position: chr15:18578166-18578906 (view UCSC Genome Browser custom track)
Alignm length: 777
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 65

Conread position: 54-800
Cow position: chr15:20412049-20412793 (view UCSC Genome Browser custom track)
Alignm length: 774
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 65

Conread position: 54-800
Cow position: chr15:21664289-21663549 (view UCSC Genome Browser custom track)
Alignm length: 766
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 65

Conread position: 54-800
Cow position: chr15:24296645-24297389 (view UCSC Genome Browser custom track)
Alignm length: 774
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 67

Conread position: 54-800
Cow position: chr15:36624190-36623470 (view UCSC Genome Browser custom track)
Alignm length: 765
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 34

Conread position: 54-800
Cow position: chr15:38982116-38982846 (view UCSC Genome Browser custom track)
Alignm length: 771
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 430, 56

Conread position: 54-800
Cow position: chr15:51219199-51219936 (view UCSC Genome Browser custom track)
Alignm length: 769
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 321, 62

Conread position: 54-800
Cow position: chr15:51912127-51911347 (view UCSC Genome Browser custom track)
Alignm length: 796
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 297

Conread position: 54-804
Cow position: chr15:4387210-4387953 (view UCSC Genome Browser custom track)
Alignm length: 777
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 56

Conread position: 55-430
Cow position: chr15:7838722-7839079 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 256
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 6, 65

Conread position: 55-508
Cow position: chr15:18215436-18215892 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 38

Conread position: 55-705
Cow position: chr15:59105-59749 (view UCSC Genome Browser custom track)
Alignm length: 670
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 66

Conread position: 55-731
Cow position: chr15:53339677-53340341 (view UCSC Genome Browser custom track)
Alignm length: 699
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 55

Conread position: 55-751
Cow position: chr15:35737250-35737935 (view UCSC Genome Browser custom track)
Alignm length: 716
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 67

Conread position: 56-462
Cow position: chr15:26157287-26157671 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 339, 63

Conread position: 57-201
Cow position: chr15:2587991-2587844 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 63, 0

Conread position: 59-696
Cow position: chr15:21965465-21966091 (view UCSC Genome Browser custom track)
Alignm length: 659
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 66

Conread position: 59-788
Cow position: chr15:8059425-8060172 (view UCSC Genome Browser custom track)
Alignm length: 761
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 63

Conread position: 60-717
Cow position: chr15:9737466-9736798 (view UCSC Genome Browser custom track)
Alignm length: 683
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 60

Conread position: 61-233
Cow position: chr15:32067149-32066982 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 61, 0

Conread position: 61-410
Cow position: chr15:6590656-6590326 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 245
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 325, 59

Conread position: 61-410
Cow position: chr15:50122478-50122157 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 249
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 334, 59

Conread position: 61-481
Cow position: chr15:31360322-31360720 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 311, 58

Conread position: 61-575
Cow position: chr15:20355141-20354643 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 356
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 311, 64

Conread position: 61-615
Cow position: chr15:2018577-2019129 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 368
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 23, 36

Conread position: 61-671
Cow position: chr15:9002762-9002168 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 315, 65

Conread position: 61-687
Cow position: chr15:4814050-4814657 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 17

Conread position: 61-784
Cow position: chr15:1783791-1784513 (view UCSC Genome Browser custom track)
Alignm length: 749
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 41

Conread position: 61-784
Cow position: chr15:8100911-8101636 (view UCSC Genome Browser custom track)
Alignm length: 751
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 322, 17

Conread position: 61-796
Cow position: chr15:9431395-9432123 (view UCSC Genome Browser custom track)
Alignm length: 759
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 312, 61

Conread position: 61-800
Cow position: chr15:7930028-7930763 (view UCSC Genome Browser custom track)
Alignm length: 771
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 61

Conread position: 61-800
Cow position: chr15:7964483-7963765 (view UCSC Genome Browser custom track)
Alignm length: 757
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 59

Conread position: 61-800
Cow position: chr15:24041727-24042460 (view UCSC Genome Browser custom track)
Alignm length: 762
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 309, 64

Conread position: 62-492
Cow position: chr15:4860641-4861046 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 299
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 307, 60

Conread position: 63-445
Cow position: chr15:22239557-22239194 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 257
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 233, 16

Conread position: 63-491
Cow position: chr15:3777230-3776825 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 293
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 316, 52

Conread position: 63-510
Cow position: chr15:17294511-17294935 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 323, 59

Conread position: 63-784
Cow position: chr15:6080171-6080884 (view UCSC Genome Browser custom track)
Alignm length: 745
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 331, 39

Conread position: 63-800
Cow position: chr15:2900798-2900056 (view UCSC Genome Browser custom track)
Alignm length: 762
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 165

Conread position: 63-804
Cow position: chr15:6614481-6615220 (view UCSC Genome Browser custom track)
Alignm length: 764
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 311, 57

Conread position: 65-201
Cow position: chr15:18331373-18331242 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 51, 0

Conread position: 65-800
Cow position: chr15:21534652-21533934 (view UCSC Genome Browser custom track)
Alignm length: 753
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 309, 37

Conread position: 66-492
Cow position: chr15:22153122-22153538 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 292
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 184, 70

Conread position: 66-784
Cow position: chr15:36330996-36330278 (view UCSC Genome Browser custom track)
Alignm length: 744
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 54

Conread position: 66-800
Cow position: chr15:6329507-6330221 (view UCSC Genome Browser custom track)
Alignm length: 747
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 56

Conread position: 67-638
Cow position: chr15:21451148-21451711 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 7

Conread position: 67-639
Cow position: chr15:6627034-6627591 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 371
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 258, 51

Conread position: 76-365
Cow position: chr15:2411306-2411040 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 208
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 44, 0

Conread position: 78-799
Cow position: chr15:16508367-16509058 (view UCSC Genome Browser custom track)
Alignm length: 739
Alignm identity: 469
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 107, 44

Conread position: 78-804
Cow position: chr15:9394445-9395165 (view UCSC Genome Browser custom track)
Alignm length: 752
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 41

Conread position: 88-677
Cow position: chr15:314590-314013 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 33

Conread position: 89-671
Cow position: chr15:4823895-4824457 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 30

Conread position: 99-793
Cow position: chr15:34365927-34365199 (view UCSC Genome Browser custom track)
Alignm length: 738
Alignm identity: 449
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 141, 22

Conread position: 102-411
Cow position: chr15:1831878-1831588 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 220
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 272, 20

Conread position: 102-411
Cow position: chr15:21828150-21828445 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 20

Conread position: 103-790
Cow position: chr15:13429323-13430008 (view UCSC Genome Browser custom track)
Alignm length: 713
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 17

Conread position: 111-784
Cow position: chr15:706098-705416 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 442
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 13, 109

Conread position: 116-800
Cow position: chr15:7509612-7508937 (view UCSC Genome Browser custom track)
Alignm length: 712
Alignm identity: 451
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 215, 20

Conread position: 123-638
Cow position: chr15:4766666-4767169 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 17

Conread position: 123-717
Cow position: chr15:4923665-4924244 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 103

Conread position: 123-800
Cow position: chr15:14580635-14579951 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 13

Conread position: 125-731
Cow position: chr15:36669195-36669761 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 394
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 366, 100

Conread position: 125-801
Cow position: chr15:17216619-17215949 (view UCSC Genome Browser custom track)
Alignm length: 698
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 24

Conread position: 126-492
Cow position: chr15:2486992-2486644 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 100

Conread position: 130-784
Cow position: chr15:20456595-20457233 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 78

Conread position: 130-784
Cow position: chr15:29342491-29341872 (view UCSC Genome Browser custom track)
Alignm length: 664
Alignm identity: 424
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 244, 65

Conread position: 130-803
Cow position: chr15:14755541-14756200 (view UCSC Genome Browser custom track)
Alignm length: 694
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 95

Conread position: 136-627
Cow position: chr15:48007929-48008420 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 326
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 140, 84

Conread position: 137-753
Cow position: chr15:8410566-8411188 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 89

Conread position: 137-800
Cow position: chr15:24287943-24287293 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 89

Conread position: 137-804
Cow position: chr15:14574778-14574100 (view UCSC Genome Browser custom track)
Alignm length: 695
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 71

Conread position: 139-784
Cow position: chr15:20406225-20405558 (view UCSC Genome Browser custom track)
Alignm length: 686
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 87

Conread position: 139-804
Cow position: chr15:28488592-28487924 (view UCSC Genome Browser custom track)
Alignm length: 694
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 87

Conread position: 146-784
Cow position: chr15:480111-480759 (view UCSC Genome Browser custom track)
Alignm length: 667
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 84

Conread position: 149-746
Cow position: chr15:610696-610103 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 33

Conread position: 149-784
Cow position: chr15:5496595-5497235 (view UCSC Genome Browser custom track)
Alignm length: 657
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 91

Conread position: 155-671
Cow position: chr15:7330227-7329698 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 345
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 56, 18

Conread position: 208-409
Cow position: chr15:32513765-32513563 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 144
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 61, 41

Conread position: 242-478
Cow position: chr15:24045273-24045500 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 175
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 153, 54

Conread position: 245-804
Cow position: chr15:7235934-7236511 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 166

Conread position: 248-758
Cow position: chr15:3722414-3721879 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 89

Conread position: 249-399
Cow position: chr15:8030781-8030627 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 125, 0

Conread position: 249-480
Cow position: chr15:20042641-20042398 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 168
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 86, 99

Conread position: 249-510
Cow position: chr15:34144298-34144044 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 200
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 134, 56

Conread position: 249-617
Cow position: chr15:6083754-6084116 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 251
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 18, 89

Conread position: 249-623
Cow position: chr15:37459513-37459894 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 260
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 40, 52

Conread position: 249-691
Cow position: chr15:25046442-25046884 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 306
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 93, 173

Conread position: 249-716
Cow position: chr15:22290462-22289986 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 329
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 123, 20

Conread position: 249-733
Cow position: chr15:49522250-49522737 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 153

Conread position: 249-754
Cow position: chr15:9911664-9911148 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 107

Conread position: 249-784
Cow position: chr15:12495273-12494724 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 355
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 130, 18

Conread position: 249-796
Cow position: chr15:25105763-25105218 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 46

Conread position: 249-800
Cow position: chr15:13389718-13389169 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 140

Conread position: 251-779
Cow position: chr15:32479006-32478480 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 346
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 127, 55

Conread position: 252-472
Cow position: chr15:7782815-7782596 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 161
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 122, 43

Conread position: 252-584
Cow position: chr15:32719072-32718737 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 228
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 128, 171

Conread position: 252-652
Cow position: chr15:39447918-39447510 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 285
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 120, 90

Conread position: 252-691
Cow position: chr15:40102645-40103075 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 293
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 146, 22

Conread position: 252-717
Cow position: chr15:2671551-2671083 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 316
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 127, 31

Conread position: 258-796
Cow position: chr15:53322769-53323311 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 363
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 117, 76

Conread position: 262-629
Cow position: chr15:21947531-21947161 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 255
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 110, 7

Conread position: 263-453
Cow position: chr15:45157603-45157798 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 151
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 111, 0

Conread position: 264-753
Cow position: chr15:3153905-3153415 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 145

Conread position: 266-408
Cow position: chr15:18021608-18021464 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 106, 0

Conread position: 266-717
Cow position: chr15:8752543-8753009 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 145

Conread position: 268-776
Cow position: chr15:25489910-25490442 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 165

Conread position: 275-804
Cow position: chr15:13679062-13679592 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 81

Conread position: 288-800
Cow position: chr15:7270013-7270536 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 122

Conread position: 290-617
Cow position: chr15:35844746-35845079 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 219
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 26, 108

Conread position: 297-718
Cow position: chr15:32695834-32696255 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 285
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 133, 53

Conread position: 297-800
Cow position: chr15:16789102-16788584 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 127

Conread position: 298-472
Cow position: chr15:32066950-32066782 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 139
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 76, 58

Conread position: 298-790
Cow position: chr15:5939984-5939483 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 49

Conread position: 299-648
Cow position: chr15:4687533-4687887 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 209
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 96, 107

Conread position: 299-677
Cow position: chr15:280861-280474 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 258
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 80, 53

Conread position: 302-509
Cow position: chr15:6487171-6487375 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 152
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 72, 14

Conread position: 304-672
Cow position: chr15:36280261-36279900 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 250
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 73, 107

Conread position: 304-790
Cow position: chr15:18228748-18229250 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 106

Conread position: 309-509
Cow position: chr15:49387832-49387632 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 156
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 65, 101

Conread position: 311-799
Cow position: chr15:6119112-6119607 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 99

Conread position: 321-784
Cow position: chr15:24795592-24796065 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 327
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 53, 71

Conread position: 330-801
Cow position: chr15:40062905-40063391 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 326
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 64, 79

Conread position: 339-790
Cow position: chr15:6562889-6563363 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 318
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 35, 206

Conread position: 349-784
Cow position: chr15:25131684-25132134 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 295
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 33, 9

Conread position: 355-652
Cow position: chr15:6480493-6480800 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 201
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 40, 95

Conread position: 362-784
Cow position: chr15:7840041-7840482 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 285
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 10, 55

Conread position: 412-639
Cow position: chr15:6224625-6224859 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 163
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 19, 9

Conread position: 412-804
Cow position: chr15:31586608-31586194 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 276
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 19, 9

Conread position: 436-784
Cow position: chr15:30727431-30727072 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 233
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 50, 242

Conread position: 436-800
Cow position: chr15:4638749-4639129 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 245
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 58, 334

Conread position: 439-796
Cow position: chr15:8358490-8358851 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 236
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 111, 44

Conread position: 448-796
Cow position: chr15:2410858-2410509 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 243
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 102, 61

Conread position: 550-800
Cow position: chr15:36357146-36356890 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 176
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 81, 131

Conread position: 551-800
Cow position: chr15:27747946-27748205 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 173
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 80, 214

Conread position: 554-780
Cow position: chr15:32512981-32512746 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 165
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 84, 214

Show alignments to all cow chromosomes.