Cow genome map

Conread name: Ss1.1-Thy1-THY010064A03.5

Conread position: 39-778
Cow position: chr16:16030987-16031737 (view UCSC Genome Browser custom track)
Alignm length: 780
Alignm identity: 540
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 10

Conread position: 46-478
Cow position: chr16:4649623-4649215 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 298
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 110, 77

Conread position: 53-492
Cow position: chr16:1959516-1959103 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 297
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 323, 50

Conread position: 53-781
Cow position: chr16:1433294-1434019 (view UCSC Genome Browser custom track)
Alignm length: 757
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 74

Conread position: 53-784
Cow position: chr16:29035009-29035728 (view UCSC Genome Browser custom track)
Alignm length: 751
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 319, 60

Conread position: 53-796
Cow position: chr16:5891106-5891848 (view UCSC Genome Browser custom track)
Alignm length: 773
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 69

Conread position: 53-796
Cow position: chr16:20200236-20200963 (view UCSC Genome Browser custom track)
Alignm length: 767
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 323, 66

Conread position: 53-800
Cow position: chr16:7465715-7466460 (view UCSC Genome Browser custom track)
Alignm length: 772
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 319, 68

Conread position: 53-800
Cow position: chr16:27732271-27731535 (view UCSC Genome Browser custom track)
Alignm length: 767
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 327, 63

Conread position: 54-201
Cow position: chr16:3088093-3087951 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 66, 0

Conread position: 54-237
Cow position: chr16:18580899-18580722 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 68, 0

Conread position: 54-337
Cow position: chr16:37451962-37451700 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 195
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 277, 72

Conread position: 54-370
Cow position: chr16:5118908-5118611 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 0

Conread position: 54-396
Cow position: chr16:41685157-41684831 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 235
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 309, 68

Conread position: 54-406
Cow position: chr16:14664705-14664379 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 246
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 318, 56

Conread position: 54-411
Cow position: chr16:197041-196704 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 243
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 122, 66

Conread position: 54-411
Cow position: chr16:18667496-18667830 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 240
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 69, 0

Conread position: 54-419
Cow position: chr16:34531398-34531745 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 62

Conread position: 54-451
Cow position: chr16:28469951-28469574 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 65

Conread position: 54-453
Cow position: chr16:4474491-4474119 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 340, 65

Conread position: 54-498
Cow position: chr16:5527276-5526863 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 72

Conread position: 54-590
Cow position: chr16:23809470-23809989 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 68

Conread position: 54-664
Cow position: chr16:25258913-25259511 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 323, 70

Conread position: 54-670
Cow position: chr16:40556802-40556204 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 326, 56

Conread position: 54-689
Cow position: chr16:21016842-21017457 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 439, 65

Conread position: 54-704
Cow position: chr16:20193061-20192424 (view UCSC Genome Browser custom track)
Alignm length: 672
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 66

Conread position: 54-717
Cow position: chr16:5662950-5663602 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 323, 66

Conread position: 54-717
Cow position: chr16:42747109-42746497 (view UCSC Genome Browser custom track)
Alignm length: 673
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 329, 65

Conread position: 54-724
Cow position: chr16:25442740-25443404 (view UCSC Genome Browser custom track)
Alignm length: 697
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 56

Conread position: 54-753
Cow position: chr16:23250873-23250178 (view UCSC Genome Browser custom track)
Alignm length: 726
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 65

Conread position: 54-781
Cow position: chr16:33642-34371 (view UCSC Genome Browser custom track)
Alignm length: 751
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 66

Conread position: 54-784
Cow position: chr16:7675347-7674628 (view UCSC Genome Browser custom track)
Alignm length: 756
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 56

Conread position: 54-784
Cow position: chr16:12536841-12536114 (view UCSC Genome Browser custom track)
Alignm length: 759
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 24

Conread position: 54-784
Cow position: chr16:22800562-22799839 (view UCSC Genome Browser custom track)
Alignm length: 758
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 327, 56

Conread position: 54-784
Cow position: chr16:26664837-26665547 (view UCSC Genome Browser custom track)
Alignm length: 747
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 65

Conread position: 54-784
Cow position: chr16:28169211-28168487 (view UCSC Genome Browser custom track)
Alignm length: 755
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 66

Conread position: 54-784
Cow position: chr16:28195195-28194469 (view UCSC Genome Browser custom track)
Alignm length: 756
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 66

Conread position: 54-784
Cow position: chr16:40295056-40294340 (view UCSC Genome Browser custom track)
Alignm length: 745
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 65

Conread position: 54-784
Cow position: chr16:41162359-41161633 (view UCSC Genome Browser custom track)
Alignm length: 755
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 68

Conread position: 54-784
Cow position: chr16:41165648-41164928 (view UCSC Genome Browser custom track)
Alignm length: 750
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 44

Conread position: 54-784
Cow position: chr16:43896153-43895432 (view UCSC Genome Browser custom track)
Alignm length: 756
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 56

Conread position: 54-784
Cow position: chr16:49220807-49220124 (view UCSC Genome Browser custom track)
Alignm length: 744
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 341, 30

Conread position: 54-790
Cow position: chr16:27594618-27595355 (view UCSC Genome Browser custom track)
Alignm length: 761
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 66

Conread position: 54-796
Cow position: chr16:18618016-18617294 (view UCSC Genome Browser custom track)
Alignm length: 767
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 325, 66

Conread position: 54-799
Cow position: chr16:20203086-20203846 (view UCSC Genome Browser custom track)
Alignm length: 773
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 60

Conread position: 54-800
Cow position: chr16:3770906-3770164 (view UCSC Genome Browser custom track)
Alignm length: 772
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 65

Conread position: 54-800
Cow position: chr16:5486871-5487617 (view UCSC Genome Browser custom track)
Alignm length: 775
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 56

Conread position: 54-800
Cow position: chr16:8814997-8814257 (view UCSC Genome Browser custom track)
Alignm length: 771
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 37

Conread position: 54-800
Cow position: chr16:15186184-15186916 (view UCSC Genome Browser custom track)
Alignm length: 766
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 62

Conread position: 54-800
Cow position: chr16:25456370-25455615 (view UCSC Genome Browser custom track)
Alignm length: 781
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 182

Conread position: 54-800
Cow position: chr16:54324218-54323473 (view UCSC Genome Browser custom track)
Alignm length: 772
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 65

Conread position: 54-801
Cow position: chr16:16229417-16230160 (view UCSC Genome Browser custom track)
Alignm length: 780
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 324, 36

Conread position: 55-677
Cow position: chr16:15568368-15568975 (view UCSC Genome Browser custom track)
Alignm length: 645
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 55

Conread position: 55-800
Cow position: chr16:52525341-52526078 (view UCSC Genome Browser custom track)
Alignm length: 765
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 18

Conread position: 56-492
Cow position: chr16:47627551-47627138 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 47

Conread position: 57-784
Cow position: chr16:36240268-36240987 (view UCSC Genome Browser custom track)
Alignm length: 749
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 28

Conread position: 59-400
Cow position: chr16:17949135-17948819 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 240
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 294, 60

Conread position: 59-568
Cow position: chr16:7379528-7379046 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 345
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 316, 27

Conread position: 59-659
Cow position: chr16:39365777-39365179 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 8

Conread position: 61-258
Cow position: chr16:41753495-41753306 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 139
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 61-420
Cow position: chr16:16240176-16239834 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 246
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 334, 61

Conread position: 61-470
Cow position: chr16:3828221-3827832 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 281
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 46, 35

Conread position: 61-484
Cow position: chr16:2482033-2481631 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 58

Conread position: 61-498
Cow position: chr16:27299038-27298633 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 293
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 322, 17

Conread position: 61-655
Cow position: chr16:27006173-27006742 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 334, 61

Conread position: 61-691
Cow position: chr16:16537918-16538543 (view UCSC Genome Browser custom track)
Alignm length: 658
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 61

Conread position: 61-745
Cow position: chr16:43846100-43845425 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 315, 58

Conread position: 61-749
Cow position: chr16:6944391-6945067 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 59

Conread position: 61-759
Cow position: chr16:41563500-41564173 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 311, 62

Conread position: 61-784
Cow position: chr16:2237654-2236939 (view UCSC Genome Browser custom track)
Alignm length: 749
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 59

Conread position: 61-784
Cow position: chr16:10439374-10440074 (view UCSC Genome Browser custom track)
Alignm length: 746
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 312, 49

Conread position: 61-784
Cow position: chr16:23984420-23985141 (view UCSC Genome Browser custom track)
Alignm length: 753
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 311, 58

Conread position: 61-784
Cow position: chr16:25086729-25087441 (view UCSC Genome Browser custom track)
Alignm length: 747
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 61

Conread position: 61-784
Cow position: chr16:37479738-37479030 (view UCSC Genome Browser custom track)
Alignm length: 746
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 319, 58

Conread position: 61-800
Cow position: chr16:25343088-25343823 (view UCSC Genome Browser custom track)
Alignm length: 766
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 311, 58

Conread position: 61-800
Cow position: chr16:28436010-28435291 (view UCSC Genome Browser custom track)
Alignm length: 756
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 311, 58

Conread position: 61-800
Cow position: chr16:29048140-29048877 (view UCSC Genome Browser custom track)
Alignm length: 764
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 311, 56

Conread position: 62-237
Cow position: chr16:23671816-23671984 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 126
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 62-343
Cow position: chr16:38354986-38354720 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 189
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 233, 60

Conread position: 62-766
Cow position: chr16:29208119-29207398 (view UCSC Genome Browser custom track)
Alignm length: 743
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 62

Conread position: 63-510
Cow position: chr16:10966981-10966559 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 309
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 315, 53

Conread position: 64-510
Cow position: chr16:27823134-27822706 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 309, 55

Conread position: 65-629
Cow position: chr16:51039465-51040009 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 50

Conread position: 65-784
Cow position: chr16:34504822-34505528 (view UCSC Genome Browser custom track)
Alignm length: 743
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 108

Conread position: 65-800
Cow position: chr16:49744323-49743584 (view UCSC Genome Browser custom track)
Alignm length: 761
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 309, 61

Conread position: 72-411
Cow position: chr16:20641309-20641637 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 48

Conread position: 74-510
Cow position: chr16:338308-338706 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 294
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 301, 48

Conread position: 75-704
Cow position: chr16:32740517-32741128 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 410
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 202, 67

Conread position: 79-502
Cow position: chr16:5872045-5872459 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 286
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 15, 103

Conread position: 85-645
Cow position: chr16:15548049-15548600 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 10

Conread position: 85-670
Cow position: chr16:38534153-38533592 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 380
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 197, 34

Conread position: 88-784
Cow position: chr16:40841532-40842241 (view UCSC Genome Browser custom track)
Alignm length: 732
Alignm identity: 457
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 298, 34

Conread position: 89-800
Cow position: chr16:31587564-31586850 (view UCSC Genome Browser custom track)
Alignm length: 741
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 18

Conread position: 96-510
Cow position: chr16:51402733-51402329 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 20

Conread position: 99-766
Cow position: chr16:56915966-56915296 (view UCSC Genome Browser custom track)
Alignm length: 695
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 23

Conread position: 103-507
Cow position: chr16:46054752-46055139 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 14

Conread position: 121-507
Cow position: chr16:5653598-5653969 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 269
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 259, 103

Conread position: 123-366
Cow position: chr16:3145513-3145283 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 174
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 103, 0

Conread position: 123-450
Cow position: chr16:23534739-23534428 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 56

Conread position: 123-639
Cow position: chr16:46103533-46103029 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 103

Conread position: 124-781
Cow position: chr16:5589528-5590195 (view UCSC Genome Browser custom track)
Alignm length: 691
Alignm identity: 433
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 248, 102

Conread position: 125-800
Cow position: chr16:2409719-2409048 (view UCSC Genome Browser custom track)
Alignm length: 703
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 101

Conread position: 126-508
Cow position: chr16:18974306-18974670 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 97

Conread position: 126-764
Cow position: chr16:26991770-26991138 (view UCSC Genome Browser custom track)
Alignm length: 662
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 47

Conread position: 126-780
Cow position: chr16:42161921-42162575 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 100

Conread position: 130-704
Cow position: chr16:49386196-49386763 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 370
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 120, 43

Conread position: 133-795
Cow position: chr16:4847744-4847057 (view UCSC Genome Browser custom track)
Alignm length: 701
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 16

Conread position: 136-800
Cow position: chr16:39035511-39034854 (view UCSC Genome Browser custom track)
Alignm length: 683
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 90

Conread position: 137-712
Cow position: chr16:4799528-4798961 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 89

Conread position: 146-800
Cow position: chr16:838479-839130 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 80

Conread position: 149-804
Cow position: chr16:11284420-11285072 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 77

Conread position: 150-604
Cow position: chr16:25742082-25742507 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 320
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 20, 48

Conread position: 153-480
Cow position: chr16:30049736-30050044 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 225
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 219, 31

Conread position: 160-625
Cow position: chr16:7296526-7296983 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 318
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 153, 74

Conread position: 208-704
Cow position: chr16:25261698-25262219 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 133

Conread position: 233-690
Cow position: chr16:48136014-48135557 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 307
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 30, 67

Conread position: 236-784
Cow position: chr16:19673105-19672525 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 383
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 120, 52

Conread position: 237-800
Cow position: chr16:25934437-25934999 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 12

Conread position: 248-625
Cow position: chr16:9210205-9210581 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 242
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 75, 155

Conread position: 248-784
Cow position: chr16:16268603-16268063 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 160

Conread position: 248-804
Cow position: chr16:5634010-5633458 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 48

Conread position: 249-411
Cow position: chr16:24064368-24064526 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 58, 121

Conread position: 249-671
Cow position: chr16:41626093-41626523 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 290
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 124, 161

Conread position: 249-780
Cow position: chr16:39644940-39645479 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 160

Conread position: 249-781
Cow position: chr16:16992329-16992869 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 171

Conread position: 249-784
Cow position: chr16:10374398-10373851 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 166

Conread position: 249-784
Cow position: chr16:51086054-51086612 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 301

Conread position: 249-787
Cow position: chr16:52590412-52589874 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 171

Conread position: 249-790
Cow position: chr16:21188514-21189071 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 161

Conread position: 249-800
Cow position: chr16:2725940-2725373 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 161

Conread position: 249-800
Cow position: chr16:15981102-15980539 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 161

Conread position: 249-800
Cow position: chr16:49254963-49254405 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 373
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 128, 53

Conread position: 250-800
Cow position: chr16:27711870-27711326 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 369
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 145, 87

Conread position: 251-453
Cow position: chr16:4423909-4424108 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 151
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 121, 159

Conread position: 252-410
Cow position: chr16:16908655-16908813 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 120, 44

Conread position: 252-483
Cow position: chr16:16557800-16558027 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 161
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 119, 59

Conread position: 252-784
Cow position: chr16:3331208-3331741 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 157

Conread position: 255-636
Cow position: chr16:12667190-12666807 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 259
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 17, 21

Conread position: 262-645
Cow position: chr16:45232674-45233056 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 251
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 35, 133

Conread position: 262-777
Cow position: chr16:14620964-14620443 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 337
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 28, 15

Conread position: 264-790
Cow position: chr16:2891217-2890675 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 146

Conread position: 266-617
Cow position: chr16:23789443-23789798 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 248
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 129, 112

Conread position: 274-503
Cow position: chr16:44412475-44412699 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 155
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 121, 32

Conread position: 284-509
Cow position: chr16:27105189-27105412 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 169
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 85, 112

Conread position: 298-492
Cow position: chr16:24811327-24811513 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 145
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 14, 25

Conread position: 298-790
Cow position: chr16:26651949-26652456 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 31

Conread position: 300-804
Cow position: chr16:9023895-9024409 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 331
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 72, 49

Conread position: 303-773
Cow position: chr16:39614594-39615071 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 311
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 92, 111

Conread position: 307-784
Cow position: chr16:47402724-47403214 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 108

Conread position: 314-724
Cow position: chr16:818048-818484 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 300
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 65, 135

Conread position: 320-753
Cow position: chr16:25463550-25463107 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 90

Conread position: 324-800
Cow position: chr16:2273423-2273909 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 323
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 47, 91

Conread position: 325-659
Cow position: chr16:48910467-48910134 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 230
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 46, 21

Conread position: 340-780
Cow position: chr16:23365534-23365083 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 297
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 86, 73

Conread position: 341-790
Cow position: chr16:47787330-47787795 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 325
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 33, 74

Conread position: 347-790
Cow position: chr16:23877145-23876687 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 313
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 27, 67

Conread position: 352-800
Cow position: chr16:23671996-23672459 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 306
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 78, 20

Conread position: 358-804
Cow position: chr16:3145001-3144544 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 319
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 22, 57

Conread position: 373-671
Cow position: chr16:55149646-55149947 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 212
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 23, 41

Conread position: 380-804
Cow position: chr16:1566256-1565822 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 300
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 15, 34

Conread position: 412-784
Cow position: chr16:28269617-28269235 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 254
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 23, 9

Conread position: 427-784
Cow position: chr16:14663847-14663475 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 243
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 54, 114

Conread position: 436-784
Cow position: chr16:32325318-32325686 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 249
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 50, 192

Conread position: 496-804
Cow position: chr16:3149488-3149176 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 177
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 130, 121

Conread position: 497-790
Cow position: chr16:20277389-20277690 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 199
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 43, 53

Conread position: 535-800
Cow position: chr16:42804331-42804602 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 182
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 15, 186

Conread position: 540-800
Cow position: chr16:20635934-20635667 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 178
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 10, 69

Show alignments to all cow chromosomes.