Cow genome map

Conread name: Ss1.1-Thy1-THY010064A03.5

Conread position: 46-800
Cow position:
Alignm length: 783
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 328, 19

Conread position: 53-790
Cow position:
Alignm length: 762
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 262, 67

Conread position: 53-800
Cow position:
Alignm length: 784
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 327, 69

Conread position: 53-800
Cow position:
Alignm length: 762
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 66

Conread position: 54-201
Cow position:
Alignm length: 148
Alignm identity: 113
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 66, 0

Conread position: 54-224
Cow position:
Alignm length: 171
Alignm identity: 126
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 68, 0

Conread position: 54-237
Cow position:
Alignm length: 184
Alignm identity: 138
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 68, 0

Conread position: 54-246
Cow position:
Alignm length: 193
Alignm identity: 142
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 65, 0

Conread position: 54-397
Cow position:
Alignm length: 346
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 66

Conread position: 54-401
Cow position:
Alignm length: 349
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 68

Conread position: 54-411
Cow position:
Alignm length: 360
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 65

Conread position: 54-416
Cow position:
Alignm length: 365
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 68

Conread position: 54-443
Cow position:
Alignm length: 393
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 68

Conread position: 54-492
Cow position:
Alignm length: 442
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 66

Conread position: 54-600
Cow position:
Alignm length: 566
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 19

Conread position: 54-659
Cow position:
Alignm length: 639
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 73

Conread position: 54-671
Cow position:
Alignm length: 631
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 321, 65

Conread position: 54-671
Cow position:
Alignm length: 636
Alignm identity: 415
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 302, 56

Conread position: 54-677
Cow position:
Alignm length: 647
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 58

Conread position: 54-689
Cow position:
Alignm length: 650
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 66

Conread position: 54-712
Cow position:
Alignm length: 678
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 56

Conread position: 54-723
Cow position:
Alignm length: 693
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 68

Conread position: 54-753
Cow position:
Alignm length: 726
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 323, 65

Conread position: 54-778
Cow position:
Alignm length: 744
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 56

Conread position: 54-779
Cow position:
Alignm length: 757
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 60

Conread position: 54-782
Cow position:
Alignm length: 748
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 176

Conread position: 54-783
Cow position:
Alignm length: 752
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 174

Conread position: 54-784
Cow position:
Alignm length: 753
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 66

Conread position: 54-784
Cow position:
Alignm length: 754
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 66

Conread position: 54-784
Cow position:
Alignm length: 749
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 66

Conread position: 54-784
Cow position:
Alignm length: 756
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 66

Conread position: 54-784
Cow position:
Alignm length: 756
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 66

Conread position: 54-784
Cow position:
Alignm length: 756
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 340, 65

Conread position: 54-784
Cow position:
Alignm length: 752
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 66

Conread position: 54-790
Cow position:
Alignm length: 761
Alignm identity: 455
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 289, 67

Conread position: 54-800
Cow position:
Alignm length: 771
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 62

Conread position: 54-800
Cow position:
Alignm length: 770
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 62

Conread position: 54-800
Cow position:
Alignm length: 761
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 68

Conread position: 54-800
Cow position:
Alignm length: 783
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 65

Conread position: 55-692
Cow position:
Alignm length: 653
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 68

Conread position: 55-784
Cow position:
Alignm length: 750
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 61

Conread position: 56-412
Cow position:
Alignm length: 358
Alignm identity: 246
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 339, 63

Conread position: 59-223
Cow position:
Alignm length: 165
Alignm identity: 120
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 59-656
Cow position:
Alignm length: 639
Alignm identity: 423
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 20, 59

Conread position: 59-800
Cow position:
Alignm length: 761
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 64

Conread position: 61-237
Cow position:
Alignm length: 177
Alignm identity: 130
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 61-400
Cow position:
Alignm length: 341
Alignm identity: 233
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 308, 62

Conread position: 61-492
Cow position:
Alignm length: 433
Alignm identity: 295
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 365, 73

Conread position: 61-629
Cow position:
Alignm length: 581
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 43

Conread position: 61-671
Cow position:
Alignm length: 630
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 17

Conread position: 61-688
Cow position:
Alignm length: 645
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 311, 57

Conread position: 61-754
Cow position:
Alignm length: 717
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 61

Conread position: 61-784
Cow position:
Alignm length: 739
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 311, 49

Conread position: 61-784
Cow position:
Alignm length: 748
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 59

Conread position: 61-790
Cow position:
Alignm length: 755
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 61

Conread position: 61-796
Cow position:
Alignm length: 754
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 311, 55

Conread position: 61-800
Cow position:
Alignm length: 770
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 61

Conread position: 61-803
Cow position:
Alignm length: 765
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 25

Conread position: 62-747
Cow position:
Alignm length: 698
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 10

Conread position: 62-784
Cow position:
Alignm length: 752
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 55

Conread position: 63-410
Cow position:
Alignm length: 350
Alignm identity: 247
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 311, 47

Conread position: 63-784
Cow position:
Alignm length: 740
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 59

Conread position: 63-790
Cow position:
Alignm length: 755
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 36

Conread position: 64-463
Cow position:
Alignm length: 403
Alignm identity: 278
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 307, 59

Conread position: 64-800
Cow position:
Alignm length: 759
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 151

Conread position: 68-717
Cow position:
Alignm length: 678
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 18

Conread position: 68-796
Cow position:
Alignm length: 754
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 54

Conread position: 72-476
Cow position:
Alignm length: 411
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 163

Conread position: 79-800
Cow position:
Alignm length: 744
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 125

Conread position: 84-784
Cow position:
Alignm length: 723
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 38

Conread position: 103-800
Cow position:
Alignm length: 726
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 14

Conread position: 111-781
Cow position:
Alignm length: 690
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 103

Conread position: 115-779
Cow position:
Alignm length: 682
Alignm identity: 437
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 261, 21

Conread position: 121-784
Cow position:
Alignm length: 688
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 105

Conread position: 123-804
Cow position:
Alignm length: 712
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 18

Conread position: 124-800
Cow position:
Alignm length: 700
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 55

Conread position: 124-800
Cow position:
Alignm length: 702
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 68

Conread position: 126-790
Cow position:
Alignm length: 690
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 100

Conread position: 146-484
Cow position:
Alignm length: 342
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 80

Conread position: 146-800
Cow position:
Alignm length: 676
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 80

Conread position: 153-800
Cow position:
Alignm length: 674
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 73

Conread position: 162-510
Cow position:
Alignm length: 355
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 64

Conread position: 171-804
Cow position:
Alignm length: 658
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 8

Conread position: 208-390
Cow position:
Alignm length: 187
Alignm identity: 132
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 208-508
Cow position:
Alignm length: 309
Alignm identity: 222
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 40, 204

Conread position: 210-614
Cow position:
Alignm length: 416
Alignm identity: 283
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 237, 93

Conread position: 249-484
Cow position:
Alignm length: 240
Alignm identity: 169
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 123, 57

Conread position: 249-576
Cow position:
Alignm length: 342
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 162

Conread position: 249-629
Cow position:
Alignm length: 399
Alignm identity: 275
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 47, 155

Conread position: 249-753
Cow position:
Alignm length: 525
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 84

Conread position: 249-784
Cow position:
Alignm length: 558
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 74

Conread position: 249-792
Cow position:
Alignm length: 562
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 61

Conread position: 249-800
Cow position:
Alignm length: 566
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 26

Conread position: 252-693
Cow position:
Alignm length: 464
Alignm identity: 309
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 26, 21

Conread position: 252-790
Cow position:
Alignm length: 581
Alignm identity: 370
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 122, 544

Conread position: 254-649
Cow position:
Alignm length: 406
Alignm identity: 263
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 25, 153

Conread position: 265-375
Cow position:
Alignm length: 112
Alignm identity: 89
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 76, 0

Conread position: 293-800
Cow position:
Alignm length: 538
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 117

Conread position: 298-784
Cow position:
Alignm length: 523
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 61

Conread position: 300-671
Cow position:
Alignm length: 394
Alignm identity: 272
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 35, 117

Conread position: 304-795
Cow position:
Alignm length: 510
Alignm identity: 320
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 48, 114

Conread position: 305-784
Cow position:
Alignm length: 487
Alignm identity: 316
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 62, 68

Conread position: 312-492
Cow position:
Alignm length: 183
Alignm identity: 144
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 65, 98

Conread position: 312-604
Cow position:
Alignm length: 305
Alignm identity: 206
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 180, 96

Conread position: 315-800
Cow position:
Alignm length: 493
Alignm identity: 320
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 79, 48

Conread position: 327-704
Cow position:
Alignm length: 401
Alignm identity: 274
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 47, 12

Conread position: 339-784
Cow position:
Alignm length: 471
Alignm identity: 309
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 35, 76

Conread position: 370-800
Cow position:
Alignm length: 458
Alignm identity: 286
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 25, 46

Conread position: 379-790
Cow position:
Alignm length: 436
Alignm identity: 290
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 16, 35

Conread position: 381-629
Cow position:
Alignm length: 254
Alignm identity: 174
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 22, 37

Conread position: 394-800
Cow position:
Alignm length: 413
Alignm identity: 264
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 275, 42

Conread position: 413-800
Cow position:
Alignm length: 416
Alignm identity: 271
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 20, 8

Conread position: 433-784
Cow position:
Alignm length: 377
Alignm identity: 245
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 61, 17

Conread position: 449-784
Cow position:
Alignm length: 359
Alignm identity: 235
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 41, 100

Conread position: 496-784
Cow position:
Alignm length: 292
Alignm identity: 188
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 218, 34

Conread position: 497-784
Cow position:
Alignm length: 292
Alignm identity: 194
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 176, 33

Conread position: 497-793
Cow position:
Alignm length: 309
Alignm identity: 201
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 53, 34

Conread position: 551-790
Cow position:
Alignm length: 251
Alignm identity: 167
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 80, 213

Show alignments to all cow chromosomes.