Cow genome map
| Conread name: | Ss1.1-Thy1-THY010064A03.5 |
| Conread position: | 46-210 |
| Cow position: | |
| Alignm length: | 165 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 52-615 |
| Cow position: | |
| Alignm length: | 574 |
| Alignm identity: | 379 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 342, 65 |
| Conread position: | 53-211 |
| Cow position: | |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 93, 8 |
| Conread position: | 53-362 |
| Cow position: | |
| Alignm length: | 310 |
| Alignm identity: | 220 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 53-764 |
| Cow position: | |
| Alignm length: | 740 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 318, 59 |
| Conread position: | 54-199 |
| Cow position: | |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 54-237 |
| Cow position: | |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 54-237 |
| Cow position: | |
| Alignm length: | 184 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 54-242 |
| Cow position: | |
| Alignm length: | 189 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 54-406 |
| Cow position: | |
| Alignm length: | 355 |
| Alignm identity: | 248 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 326, 65 |
| Conread position: | 54-453 |
| Cow position: | |
| Alignm length: | 414 |
| Alignm identity: | 282 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 70, 184 |
| Conread position: | 54-510 |
| Cow position: | |
| Alignm length: | 461 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 62 |
| Conread position: | 54-629 |
| Cow position: | |
| Alignm length: | 590 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 320, 68 |
| Conread position: | 54-652 |
| Cow position: | |
| Alignm length: | 615 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 67 |
| Conread position: | 54-656 |
| Cow position: | |
| Alignm length: | 618 |
| Alignm identity: | 402 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 324, 55 |
| Conread position: | 54-672 |
| Cow position: | |
| Alignm length: | 619 |
| Alignm identity: | 231 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 54-692 |
| Cow position: | |
| Alignm length: | 659 |
| Alignm identity: | 463 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 86 |
| Conread position: | 54-704 |
| Cow position: | |
| Alignm length: | 676 |
| Alignm identity: | 458 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 67 |
| Conread position: | 54-728 |
| Cow position: | |
| Alignm length: | 698 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 178 |
| Conread position: | 54-764 |
| Cow position: | |
| Alignm length: | 739 |
| Alignm identity: | 512 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 65 |
| Conread position: | 54-764 |
| Cow position: | |
| Alignm length: | 729 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 320, 66 |
| Conread position: | 54-779 |
| Cow position: | |
| Alignm length: | 748 |
| Alignm identity: | 497 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 318, 65 |
| Conread position: | 54-784 |
| Cow position: | |
| Alignm length: | 748 |
| Alignm identity: | 473 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 346, 63 |
| Conread position: | 54-784 |
| Cow position: | |
| Alignm length: | 751 |
| Alignm identity: | 498 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 317, 67 |
| Conread position: | 54-784 |
| Cow position: | |
| Alignm length: | 746 |
| Alignm identity: | 500 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 341, 64 |
| Conread position: | 54-784 |
| Cow position: | |
| Alignm length: | 754 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 320, 24 |
| Conread position: | 54-784 |
| Cow position: | |
| Alignm length: | 753 |
| Alignm identity: | 507 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 320, 66 |
| Conread position: | 54-788 |
| Cow position: | |
| Alignm length: | 758 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 320, 66 |
| Conread position: | 54-790 |
| Cow position: | |
| Alignm length: | 755 |
| Alignm identity: | 500 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 340, 65 |
| Conread position: | 54-790 |
| Cow position: | |
| Alignm length: | 761 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 67 |
| Conread position: | 54-800 |
| Cow position: | |
| Alignm length: | 771 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 265, 65 |
| Conread position: | 54-800 |
| Cow position: | |
| Alignm length: | 774 |
| Alignm identity: | 527 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 318, 65 |
| Conread position: | 54-800 |
| Cow position: | |
| Alignm length: | 771 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 293, 67 |
| Conread position: | 54-800 |
| Cow position: | |
| Alignm length: | 771 |
| Alignm identity: | 507 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 318, 56 |
| Conread position: | 54-804 |
| Cow position: | |
| Alignm length: | 776 |
| Alignm identity: | 528 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 320, 66 |
| Conread position: | 56-757 |
| Cow position: | |
| Alignm length: | 716 |
| Alignm identity: | 461 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 268, 55 |
| Conread position: | 57-507 |
| Cow position: | |
| Alignm length: | 458 |
| Alignm identity: | 309 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 315, 53 |
| Conread position: | 58-669 |
| Cow position: | |
| Alignm length: | 634 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 316, 62 |
| Conread position: | 59-375 |
| Cow position: | |
| Alignm length: | 318 |
| Alignm identity: | 226 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 47, 61 |
| Conread position: | 59-750 |
| Cow position: | |
| Alignm length: | 713 |
| Alignm identity: | 476 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 315, 60 |
| Conread position: | 61-212 |
| Cow position: | |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 61-335 |
| Cow position: | |
| Alignm length: | 275 |
| Alignm identity: | 191 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 61-386 |
| Cow position: | |
| Alignm length: | 326 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 61-403 |
| Cow position: | |
| Alignm length: | 346 |
| Alignm identity: | 245 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 275, 40 |
| Conread position: | 61-415 |
| Cow position: | |
| Alignm length: | 357 |
| Alignm identity: | 248 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 325, 59 |
| Conread position: | 61-503 |
| Cow position: | |
| Alignm length: | 446 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 313, 59 |
| Conread position: | 61-688 |
| Cow position: | |
| Alignm length: | 646 |
| Alignm identity: | 425 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 311, 20 |
| Conread position: | 61-763 |
| Cow position: | |
| Alignm length: | 732 |
| Alignm identity: | 469 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 315, 58 |
| Conread position: | 61-799 |
| Cow position: | |
| Alignm length: | 765 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 310, 54 |
| Conread position: | 62-453 |
| Cow position: | |
| Alignm length: | 404 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 248, 54 |
| Conread position: | 62-784 |
| Cow position: | |
| Alignm length: | 741 |
| Alignm identity: | 471 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 33, 75 |
| Conread position: | 64-630 |
| Cow position: | |
| Alignm length: | 581 |
| Alignm identity: | 371 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 28, 55 |
| Conread position: | 65-508 |
| Cow position: | |
| Alignm length: | 455 |
| Alignm identity: | 306 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 213, 37 |
| Conread position: | 65-800 |
| Cow position: | |
| Alignm length: | 756 |
| Alignm identity: | 502 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 58 |
| Conread position: | 65-800 |
| Cow position: | |
| Alignm length: | 749 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 428, 58 |
| Conread position: | 68-346 |
| Cow position: | |
| Alignm length: | 281 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 105, 10 |
| Conread position: | 68-800 |
| Cow position: | |
| Alignm length: | 747 |
| Alignm identity: | 484 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 49 |
| Conread position: | 69-237 |
| Cow position: | |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 72-444 |
| Cow position: | |
| Alignm length: | 374 |
| Alignm identity: | 248 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 259, 55 |
| Conread position: | 74-784 |
| Cow position: | |
| Alignm length: | 731 |
| Alignm identity: | 489 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 267, 45 |
| Conread position: | 77-799 |
| Cow position: | |
| Alignm length: | 736 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 295, 59 |
| Conread position: | 84-784 |
| Cow position: | |
| Alignm length: | 725 |
| Alignm identity: | 493 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 288, 35 |
| Conread position: | 106-511 |
| Cow position: | |
| Alignm length: | 416 |
| Alignm identity: | 286 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 31, 75 |
| Conread position: | 111-803 |
| Cow position: | |
| Alignm length: | 714 |
| Alignm identity: | 457 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 26 |
| Conread position: | 123-472 |
| Cow position: | |
| Alignm length: | 353 |
| Alignm identity: | 246 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 149, 103 |
| Conread position: | 131-387 |
| Cow position: | |
| Alignm length: | 262 |
| Alignm identity: | 182 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 108, 19 |
| Conread position: | 141-800 |
| Cow position: | |
| Alignm length: | 678 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 245, 85 |
| Conread position: | 152-800 |
| Cow position: | |
| Alignm length: | 672 |
| Alignm identity: | 447 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 73 |
| Conread position: | 166-492 |
| Cow position: | |
| Alignm length: | 329 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 60 |
| Conread position: | 230-751 |
| Cow position: | |
| Alignm length: | 538 |
| Alignm identity: | 349 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 144, 58 |
| Conread position: | 248-800 |
| Cow position: | |
| Alignm length: | 568 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 65 |
| Conread position: | 249-401 |
| Cow position: | |
| Alignm length: | 157 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 99, 17 |
| Conread position: | 249-472 |
| Cow position: | |
| Alignm length: | 226 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 125, 151 |
| Conread position: | 249-623 |
| Cow position: | |
| Alignm length: | 379 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 93, 103 |
| Conread position: | 249-671 |
| Cow position: | |
| Alignm length: | 439 |
| Alignm identity: | 288 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 46, 51 |
| Conread position: | 249-753 |
| Cow position: | |
| Alignm length: | 511 |
| Alignm identity: | 323 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 258, 48 |
| Conread position: | 249-784 |
| Cow position: | |
| Alignm length: | 554 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 164 |
| Conread position: | 250-717 |
| Cow position: | |
| Alignm length: | 477 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 12 |
| Conread position: | 251-784 |
| Cow position: | |
| Alignm length: | 558 |
| Alignm identity: | 358 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 73, 28 |
| Conread position: | 252-677 |
| Cow position: | |
| Alignm length: | 454 |
| Alignm identity: | 300 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 84, 26 |
| Conread position: | 254-629 |
| Cow position: | |
| Alignm length: | 391 |
| Alignm identity: | 261 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 118, 156 |
| Conread position: | 274-779 |
| Cow position: | |
| Alignm length: | 526 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 87 |
| Conread position: | 288-784 |
| Cow position: | |
| Alignm length: | 524 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 128 |
| Conread position: | 298-785 |
| Cow position: | |
| Alignm length: | 512 |
| Alignm identity: | 332 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 79, 70 |
| Conread position: | 300-800 |
| Cow position: | |
| Alignm length: | 512 |
| Alignm identity: | 334 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 56, 60 |
| Conread position: | 303-784 |
| Cow position: | |
| Alignm length: | 502 |
| Alignm identity: | 334 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 23, 110 |
| Conread position: | 304-704 |
| Cow position: | |
| Alignm length: | 425 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 107 |
| Conread position: | 314-800 |
| Cow position: | |
| Alignm length: | 499 |
| Alignm identity: | 318 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 65, 20 |
| Conread position: | 324-717 |
| Cow position: | |
| Alignm length: | 415 |
| Alignm identity: | 281 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 50, 92 |
| Conread position: | 334-790 |
| Cow position: | |
| Alignm length: | 480 |
| Alignm identity: | 275 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 97, 79 |
| Conread position: | 343-691 |
| Cow position: | |
| Alignm length: | 373 |
| Alignm identity: | 253 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 8, 76 |
| Conread position: | 366-784 |
| Cow position: | |
| Alignm length: | 439 |
| Alignm identity: | 291 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 17, 49 |
| Conread position: | 410-790 |
| Cow position: | |
| Alignm length: | 404 |
| Alignm identity: | 267 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 21, 11 |
| Conread position: | 421-800 |
| Cow position: | |
| Alignm length: | 405 |
| Alignm identity: | 267 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 72, 116 |
| Conread position: | 558-800 |
| Cow position: | |
| Alignm length: | 251 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 67, 204 |
Show alignments to all cow chromosomes.