Cow genome map
| Conread name: | Ss1.1-Thy1-THY010064A03.5 |
| Conread position: | 41-443 |
| Cow position: | chr21:25125559-25125929 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 274 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 336, 49 |
| Conread position: | 46-801 |
| Cow position: | chr21:21025423-21026193 (view UCSC Genome Browser custom track) |
| Alignm length: | 793 |
| Alignm identity: | 532 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 179 |
| Conread position: | 52-784 |
| Cow position: | chr21:7154304-7155028 (view UCSC Genome Browser custom track) |
| Alignm length: | 761 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 320, 70 |
| Conread position: | 53-224 |
| Cow position: | chr21:35404606-35404434 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 11, 101 |
| Conread position: | 53-672 |
| Cow position: | chr21:40269701-40269094 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 324, 66 |
| Conread position: | 54-246 |
| Cow position: | chr21:41797663-41797849 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 54-335 |
| Cow position: | chr21:33711104-33711363 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 54-345 |
| Cow position: | chr21:26648602-26648323 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 7, 69 |
| Conread position: | 54-353 |
| Cow position: | chr21:43564137-43563860 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 214 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 54-365 |
| Cow position: | chr21:35143723-35143431 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 221 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 54-406 |
| Cow position: | chr21:30597499-30597166 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 331, 69 |
| Conread position: | 54-408 |
| Cow position: | chr21:29003549-29003219 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 250 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 318, 56 |
| Conread position: | 54-462 |
| Cow position: | chr21:33318425-33318034 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 318, 172 |
| Conread position: | 54-479 |
| Cow position: | chr21:7591627-7592035 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 289 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 24, 47 |
| Conread position: | 54-510 |
| Cow position: | chr21:34594072-34593622 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 304 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 65, 43 |
| Conread position: | 54-510 |
| Cow position: | chr21:45783404-45783843 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 68 |
| Conread position: | 54-609 |
| Cow position: | chr21:30563635-30564175 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 318, 42 |
| Conread position: | 54-647 |
| Cow position: | chr21:147891-148468 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 317, 65 |
| Conread position: | 54-655 |
| Cow position: | chr21:31639884-31640467 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 412 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 288, 16 |
| Conread position: | 54-661 |
| Cow position: | chr21:19612731-19613328 (view UCSC Genome Browser custom track) |
| Alignm length: | 628 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 288, 42 |
| Conread position: | 54-671 |
| Cow position: | chr21:3780746-3781351 (view UCSC Genome Browser custom track) |
| Alignm length: | 636 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 295, 65 |
| Conread position: | 54-675 |
| Cow position: | chr21:10852194-10852792 (view UCSC Genome Browser custom track) |
| Alignm length: | 636 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 317, 65 |
| Conread position: | 54-689 |
| Cow position: | chr21:26401782-26401155 (view UCSC Genome Browser custom track) |
| Alignm length: | 658 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 326, 62 |
| Conread position: | 54-706 |
| Cow position: | chr21:1286231-1285616 (view UCSC Genome Browser custom track) |
| Alignm length: | 670 |
| Alignm identity: | 437 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 318, 68 |
| Conread position: | 54-781 |
| Cow position: | chr21:4036220-4036943 (view UCSC Genome Browser custom track) |
| Alignm length: | 752 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 320, 66 |
| Conread position: | 54-781 |
| Cow position: | chr21:39427036-39427768 (view UCSC Genome Browser custom track) |
| Alignm length: | 756 |
| Alignm identity: | 512 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 320, 66 |
| Conread position: | 54-784 |
| Cow position: | chr21:6967492-6966772 (view UCSC Genome Browser custom track) |
| Alignm length: | 749 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 320, 66 |
| Conread position: | 54-784 |
| Cow position: | chr21:10568668-10569388 (view UCSC Genome Browser custom track) |
| Alignm length: | 751 |
| Alignm identity: | 494 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 65 |
| Conread position: | 54-784 |
| Cow position: | chr21:26635186-26634464 (view UCSC Genome Browser custom track) |
| Alignm length: | 757 |
| Alignm identity: | 508 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 320, 57 |
| Conread position: | 54-784 |
| Cow position: | chr21:27149588-27148859 (view UCSC Genome Browser custom track) |
| Alignm length: | 755 |
| Alignm identity: | 505 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 320, 66 |
| Conread position: | 54-784 |
| Cow position: | chr21:31514346-31513624 (view UCSC Genome Browser custom track) |
| Alignm length: | 755 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 331, 65 |
| Conread position: | 54-784 |
| Cow position: | chr21:37373197-37373921 (view UCSC Genome Browser custom track) |
| Alignm length: | 754 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 320, 68 |
| Conread position: | 54-784 |
| Cow position: | chr21:42915775-42916486 (view UCSC Genome Browser custom track) |
| Alignm length: | 748 |
| Alignm identity: | 501 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 320, 66 |
| Conread position: | 54-784 |
| Cow position: | chr21:47942918-47943646 (view UCSC Genome Browser custom track) |
| Alignm length: | 753 |
| Alignm identity: | 494 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 298, 68 |
| Conread position: | 54-800 |
| Cow position: | chr21:27068993-27068250 (view UCSC Genome Browser custom track) |
| Alignm length: | 775 |
| Alignm identity: | 537 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 318, 64 |
| Conread position: | 54-800 |
| Cow position: | chr21:27285418-27286155 (view UCSC Genome Browser custom track) |
| Alignm length: | 770 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 318, 65 |
| Conread position: | 54-800 |
| Cow position: | chr21:36978932-36978197 (view UCSC Genome Browser custom track) |
| Alignm length: | 768 |
| Alignm identity: | 498 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 317, 65 |
| Conread position: | 54-800 |
| Cow position: | chr21:44763983-44763251 (view UCSC Genome Browser custom track) |
| Alignm length: | 769 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 326, 65 |
| Conread position: | 54-804 |
| Cow position: | chr21:37124386-37123646 (view UCSC Genome Browser custom track) |
| Alignm length: | 773 |
| Alignm identity: | 512 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 393, 61 |
| Conread position: | 55-689 |
| Cow position: | chr21:28257393-28258013 (view UCSC Genome Browser custom track) |
| Alignm length: | 657 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 319, 10 |
| Conread position: | 56-443 |
| Cow position: | chr21:2539105-2538735 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 266 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 80, 8 |
| Conread position: | 56-667 |
| Cow position: | chr21:11507575-11508183 (view UCSC Genome Browser custom track) |
| Alignm length: | 634 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 316, 170 |
| Conread position: | 56-790 |
| Cow position: | chr21:4096651-4097359 (view UCSC Genome Browser custom track) |
| Alignm length: | 749 |
| Alignm identity: | 501 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 312, 65 |
| Conread position: | 60-800 |
| Cow position: | chr21:2879852-2879117 (view UCSC Genome Browser custom track) |
| Alignm length: | 764 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 260, 59 |
| Conread position: | 61-236 |
| Cow position: | chr21:29949770-29949939 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 61-437 |
| Cow position: | chr21:37149952-37150322 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 20 |
| Conread position: | 61-671 |
| Cow position: | chr21:32832244-32831644 (view UCSC Genome Browser custom track) |
| Alignm length: | 632 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 61 |
| Conread position: | 61-746 |
| Cow position: | chr21:27031238-27031903 (view UCSC Genome Browser custom track) |
| Alignm length: | 702 |
| Alignm identity: | 453 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 318, 58 |
| Conread position: | 61-755 |
| Cow position: | chr21:31250971-31251669 (view UCSC Genome Browser custom track) |
| Alignm length: | 721 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 61 |
| Conread position: | 61-764 |
| Cow position: | chr21:5019120-5019820 (view UCSC Genome Browser custom track) |
| Alignm length: | 725 |
| Alignm identity: | 501 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 311, 58 |
| Conread position: | 61-784 |
| Cow position: | chr21:2512827-2513546 (view UCSC Genome Browser custom track) |
| Alignm length: | 751 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 294, 49 |
| Conread position: | 61-784 |
| Cow position: | chr21:3804900-3805621 (view UCSC Genome Browser custom track) |
| Alignm length: | 751 |
| Alignm identity: | 494 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 59 |
| Conread position: | 61-784 |
| Cow position: | chr21:28614289-28615010 (view UCSC Genome Browser custom track) |
| Alignm length: | 753 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 166 |
| Conread position: | 61-800 |
| Cow position: | chr21:28987109-28987845 (view UCSC Genome Browser custom track) |
| Alignm length: | 763 |
| Alignm identity: | 501 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 165 |
| Conread position: | 61-800 |
| Cow position: | chr21:36980622-36981348 (view UCSC Genome Browser custom track) |
| Alignm length: | 757 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 334, 61 |
| Conread position: | 61-800 |
| Cow position: | chr21:47647310-47648046 (view UCSC Genome Browser custom track) |
| Alignm length: | 762 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 58 |
| Conread position: | 62-388 |
| Cow position: | chr21:21917202-21917523 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 234 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 49, 177 |
| Conread position: | 62-614 |
| Cow position: | chr21:11469724-11470239 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 58 |
| Conread position: | 62-790 |
| Cow position: | chr21:11290654-11291389 (view UCSC Genome Browser custom track) |
| Alignm length: | 757 |
| Alignm identity: | 507 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 169 |
| Conread position: | 62-800 |
| Cow position: | chr21:20742664-20741956 (view UCSC Genome Browser custom track) |
| Alignm length: | 754 |
| Alignm identity: | 487 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 22 |
| Conread position: | 64-403 |
| Cow position: | chr21:17224711-17224390 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 55 |
| Conread position: | 64-621 |
| Cow position: | chr21:468880-469420 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 7 |
| Conread position: | 66-671 |
| Cow position: | chr21:2672295-2671710 (view UCSC Genome Browser custom track) |
| Alignm length: | 622 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 56 |
| Conread position: | 67-787 |
| Cow position: | chr21:2418188-2418898 (view UCSC Genome Browser custom track) |
| Alignm length: | 749 |
| Alignm identity: | 505 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 305, 29 |
| Conread position: | 68-393 |
| Cow position: | chr21:26837175-26837480 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 315, 49 |
| Conread position: | 73-493 |
| Cow position: | chr21:34000088-33999687 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 56 |
| Conread position: | 74-411 |
| Cow position: | chr21:34075868-34075555 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 130, 49 |
| Conread position: | 79-482 |
| Cow position: | chr21:23803625-23803234 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 273 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 43, 147 |
| Conread position: | 81-652 |
| Cow position: | chr21:8835986-8836547 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 209, 41 |
| Conread position: | 88-801 |
| Cow position: | chr21:28853853-28853133 (view UCSC Genome Browser custom track) |
| Alignm length: | 748 |
| Alignm identity: | 502 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 286, 32 |
| Conread position: | 91-667 |
| Cow position: | chr21:44253609-44254195 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 46 |
| Conread position: | 92-590 |
| Cow position: | chr21:13298587-13299063 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 343 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 289, 19 |
| Conread position: | 123-648 |
| Cow position: | chr21:31053-31571 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 359 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 12, 105 |
| Conread position: | 123-764 |
| Cow position: | chr21:1194548-1195212 (view UCSC Genome Browser custom track) |
| Alignm length: | 678 |
| Alignm identity: | 451 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 103 |
| Conread position: | 124-800 |
| Cow position: | chr21:31973912-31973262 (view UCSC Genome Browser custom track) |
| Alignm length: | 688 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 254, 25 |
| Conread position: | 125-669 |
| Cow position: | chr21:39080448-39079902 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 352 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 16, 39 |
| Conread position: | 129-610 |
| Cow position: | chr21:46290431-46290908 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 319 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 177, 19 |
| Conread position: | 129-800 |
| Cow position: | chr21:38024143-38024802 (view UCSC Genome Browser custom track) |
| Alignm length: | 689 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 249, 91 |
| Conread position: | 130-507 |
| Cow position: | chr21:23652975-23653339 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 264 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 64, 97 |
| Conread position: | 131-467 |
| Cow position: | chr21:4587994-4587665 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 239 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 241, 48 |
| Conread position: | 136-484 |
| Cow position: | chr21:15941957-15942292 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 238, 12 |
| Conread position: | 136-800 |
| Cow position: | chr21:34073530-34072865 (view UCSC Genome Browser custom track) |
| Alignm length: | 695 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 237, 89 |
| Conread position: | 137-784 |
| Cow position: | chr21:38019279-38019925 (view UCSC Genome Browser custom track) |
| Alignm length: | 674 |
| Alignm identity: | 430 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 242, 89 |
| Conread position: | 137-800 |
| Cow position: | chr21:49296874-49297536 (view UCSC Genome Browser custom track) |
| Alignm length: | 692 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 241, 89 |
| Conread position: | 138-784 |
| Cow position: | chr21:4596557-4595920 (view UCSC Genome Browser custom track) |
| Alignm length: | 670 |
| Alignm identity: | 434 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 234, 22 |
| Conread position: | 146-616 |
| Cow position: | chr21:4712714-4713160 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 304 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 226, 13 |
| Conread position: | 148-784 |
| Cow position: | chr21:36375049-36375683 (view UCSC Genome Browser custom track) |
| Alignm length: | 663 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 226, 78 |
| Conread position: | 152-376 |
| Cow position: | chr21:26848704-26848496 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 154-752 |
| Cow position: | chr21:10285203-10285821 (view UCSC Genome Browser custom track) |
| Alignm length: | 634 |
| Alignm identity: | 409 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 126, 66 |
| Conread position: | 158-790 |
| Cow position: | chr21:4481381-4481997 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 45 |
| Conread position: | 160-779 |
| Cow position: | chr21:9894196-9894839 (view UCSC Genome Browser custom track) |
| Alignm length: | 659 |
| Alignm identity: | 423 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 83, 66 |
| Conread position: | 162-756 |
| Cow position: | chr21:4737725-4738345 (view UCSC Genome Browser custom track) |
| Alignm length: | 632 |
| Alignm identity: | 409 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 12, 73 |
| Conread position: | 163-800 |
| Cow position: | chr21:49092366-49091730 (view UCSC Genome Browser custom track) |
| Alignm length: | 661 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 41 |
| Conread position: | 166-452 |
| Cow position: | chr21:4781547-4781820 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 189, 60 |
| Conread position: | 168-472 |
| Cow position: | chr21:11163155-11163445 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 174, 47 |
| Conread position: | 172-790 |
| Cow position: | chr21:7063602-7062969 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 54 |
| Conread position: | 182-781 |
| Cow position: | chr21:5011664-5011045 (view UCSC Genome Browser custom track) |
| Alignm length: | 631 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 30 |
| Conread position: | 242-510 |
| Cow position: | chr21:1767055-1766789 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 19, 166 |
| Conread position: | 249-629 |
| Cow position: | chr21:22751324-22750938 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 260 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 123, 147 |
| Conread position: | 249-664 |
| Cow position: | chr21:4737314-4736891 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 285 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 123, 93 |
| Conread position: | 252-529 |
| Cow position: | chr21:26616765-26616489 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 194 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 120, 22 |
| Conread position: | 252-800 |
| Cow position: | chr21:21172148-21171595 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 293 |
| Conread position: | 254-790 |
| Cow position: | chr21:41797573-41797022 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 156 |
| Conread position: | 263-784 |
| Cow position: | chr21:32397893-32397356 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 96 |
| Conread position: | 263-784 |
| Cow position: | chr21:34903214-34902687 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 147 |
| Conread position: | 277-801 |
| Cow position: | chr21:34656125-34656672 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 276 |
| Conread position: | 281-804 |
| Cow position: | chr21:39225881-39225342 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 129 |
| Conread position: | 288-784 |
| Cow position: | chr21:24084163-24083655 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 346 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 38, 68 |
| Conread position: | 298-671 |
| Cow position: | chr21:361921-362308 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 265 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 44, 126 |
| Conread position: | 300-790 |
| Cow position: | chr21:4091532-4092034 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 111 |
| Conread position: | 303-796 |
| Cow position: | chr21:29000137-29000636 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 322 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 10, 146 |
| Conread position: | 335-717 |
| Cow position: | chr21:29949734-29949339 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 272 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 24, 81 |
| Conread position: | 340-780 |
| Cow position: | chr21:41455-41913 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 301 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 12, 19 |
| Conread position: | 353-755 |
| Cow position: | chr21:27610493-27610075 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 279 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 42, 26 |
| Conread position: | 413-784 |
| Cow position: | chr21:30596778-30596394 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 261 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 79, 11 |
| Conread position: | 446-784 |
| Cow position: | chr21:996088-995734 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 240 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 48, 104 |
| Conread position: | 497-800 |
| Cow position: | chr21:37040214-37039906 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 54, 34 |
| Conread position: | 501-754 |
| Cow position: | chr21:35390725-35390472 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 156, 37 |
| Conread position: | 571-800 |
| Cow position: | chr21:7163509-7163270 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 67, 194 |
Show alignments to all cow chromosomes.