Cow genome map
| Conread name: | Ss1.1-Thy1-THY010064A03.5 |
| Conread position: | 41-689 |
| Cow position: | |
| Alignm length: | 670 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 331, 66 |
| Conread position: | 46-690 |
| Cow position: | |
| Alignm length: | 667 |
| Alignm identity: | 425 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 15, 22 |
| Conread position: | 46-779 |
| Cow position: | |
| Alignm length: | 750 |
| Alignm identity: | 501 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 75 |
| Conread position: | 48-414 |
| Cow position: | |
| Alignm length: | 370 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 221, 11 |
| Conread position: | 49-604 |
| Cow position: | |
| Alignm length: | 570 |
| Alignm identity: | 358 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 62, 24 |
| Conread position: | 52-510 |
| Cow position: | |
| Alignm length: | 461 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 320, 11 |
| Conread position: | 52-800 |
| Cow position: | |
| Alignm length: | 775 |
| Alignm identity: | 497 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 85 |
| Conread position: | 52-800 |
| Cow position: | |
| Alignm length: | 767 |
| Alignm identity: | 499 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 65 |
| Conread position: | 53-246 |
| Cow position: | |
| Alignm length: | 194 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 53-443 |
| Cow position: | |
| Alignm length: | 400 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 179 |
| Conread position: | 53-624 |
| Cow position: | |
| Alignm length: | 582 |
| Alignm identity: | 391 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 66, 99 |
| Conread position: | 53-647 |
| Cow position: | |
| Alignm length: | 602 |
| Alignm identity: | 379 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 294, 49 |
| Conread position: | 53-726 |
| Cow position: | |
| Alignm length: | 694 |
| Alignm identity: | 453 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 319, 27 |
| Conread position: | 53-784 |
| Cow position: | |
| Alignm length: | 747 |
| Alignm identity: | 499 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 342, 64 |
| Conread position: | 54-199 |
| Cow position: | |
| Alignm length: | 146 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 54-325 |
| Cow position: | |
| Alignm length: | 272 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 54-416 |
| Cow position: | |
| Alignm length: | 366 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 70 |
| Conread position: | 54-453 |
| Cow position: | |
| Alignm length: | 402 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 332, 67 |
| Conread position: | 54-481 |
| Cow position: | |
| Alignm length: | 433 |
| Alignm identity: | 296 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 317, 44 |
| Conread position: | 54-507 |
| Cow position: | |
| Alignm length: | 468 |
| Alignm identity: | 318 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 72, 44 |
| Conread position: | 54-617 |
| Cow position: | |
| Alignm length: | 578 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 320, 68 |
| Conread position: | 54-624 |
| Cow position: | |
| Alignm length: | 588 |
| Alignm identity: | 386 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 141, 56 |
| Conread position: | 54-670 |
| Cow position: | |
| Alignm length: | 636 |
| Alignm identity: | 410 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 255, 68 |
| Conread position: | 54-682 |
| Cow position: | |
| Alignm length: | 656 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 176 |
| Conread position: | 54-753 |
| Cow position: | |
| Alignm length: | 736 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 182 |
| Conread position: | 54-753 |
| Cow position: | |
| Alignm length: | 722 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 340, 47 |
| Conread position: | 54-753 |
| Cow position: | |
| Alignm length: | 724 |
| Alignm identity: | 484 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 341, 68 |
| Conread position: | 54-764 |
| Cow position: | |
| Alignm length: | 740 |
| Alignm identity: | 497 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 138 |
| Conread position: | 54-764 |
| Cow position: | |
| Alignm length: | 727 |
| Alignm identity: | 492 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 319, 68 |
| Conread position: | 54-766 |
| Cow position: | |
| Alignm length: | 747 |
| Alignm identity: | 493 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 302, 68 |
| Conread position: | 54-779 |
| Cow position: | |
| Alignm length: | 740 |
| Alignm identity: | 493 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 287, 56 |
| Conread position: | 54-781 |
| Cow position: | |
| Alignm length: | 757 |
| Alignm identity: | 502 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 178 |
| Conread position: | 54-784 |
| Cow position: | |
| Alignm length: | 758 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 318, 24 |
| Conread position: | 54-784 |
| Cow position: | |
| Alignm length: | 755 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 320, 25 |
| Conread position: | 54-784 |
| Cow position: | |
| Alignm length: | 757 |
| Alignm identity: | 499 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 320, 68 |
| Conread position: | 54-784 |
| Cow position: | |
| Alignm length: | 757 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 320, 65 |
| Conread position: | 54-784 |
| Cow position: | |
| Alignm length: | 762 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 320, 66 |
| Conread position: | 54-784 |
| Cow position: | |
| Alignm length: | 753 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 326, 56 |
| Conread position: | 54-790 |
| Cow position: | |
| Alignm length: | 776 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 320, 66 |
| Conread position: | 54-790 |
| Cow position: | |
| Alignm length: | 763 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 295, 68 |
| Conread position: | 54-800 |
| Cow position: | |
| Alignm length: | 766 |
| Alignm identity: | 512 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 67 |
| Conread position: | 54-800 |
| Cow position: | |
| Alignm length: | 769 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 340, 62 |
| Conread position: | 54-800 |
| Cow position: | |
| Alignm length: | 776 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 181 |
| Conread position: | 54-800 |
| Cow position: | |
| Alignm length: | 773 |
| Alignm identity: | 530 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 318, 67 |
| Conread position: | 54-804 |
| Cow position: | |
| Alignm length: | 776 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 320, 81 |
| Conread position: | 54-804 |
| Cow position: | |
| Alignm length: | 768 |
| Alignm identity: | 482 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 318, 65 |
| Conread position: | 55-478 |
| Cow position: | |
| Alignm length: | 433 |
| Alignm identity: | 293 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 60, 26 |
| Conread position: | 56-785 |
| Cow position: | |
| Alignm length: | 754 |
| Alignm identity: | 477 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 316, 54 |
| Conread position: | 58-670 |
| Cow position: | |
| Alignm length: | 632 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 316, 64 |
| Conread position: | 59-613 |
| Cow position: | |
| Alignm length: | 567 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 336, 59 |
| Conread position: | 60-764 |
| Cow position: | |
| Alignm length: | 726 |
| Alignm identity: | 495 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 315, 59 |
| Conread position: | 61-364 |
| Cow position: | |
| Alignm length: | 304 |
| Alignm identity: | 218 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 61-409 |
| Cow position: | |
| Alignm length: | 351 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 216, 25 |
| Conread position: | 61-656 |
| Cow position: | |
| Alignm length: | 614 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 51 |
| Conread position: | 61-738 |
| Cow position: | |
| Alignm length: | 696 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 311, 61 |
| Conread position: | 61-780 |
| Cow position: | |
| Alignm length: | 744 |
| Alignm identity: | 502 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 313, 61 |
| Conread position: | 62-800 |
| Cow position: | |
| Alignm length: | 763 |
| Alignm identity: | 500 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 56 |
| Conread position: | 62-800 |
| Cow position: | |
| Alignm length: | 768 |
| Alignm identity: | 523 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 60 |
| Conread position: | 63-654 |
| Cow position: | |
| Alignm length: | 605 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 419, 59 |
| Conread position: | 64-626 |
| Cow position: | |
| Alignm length: | 579 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 32 |
| Conread position: | 64-784 |
| Cow position: | |
| Alignm length: | 735 |
| Alignm identity: | 483 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 35 |
| Conread position: | 65-510 |
| Cow position: | |
| Alignm length: | 450 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 307, 45 |
| Conread position: | 66-411 |
| Cow position: | |
| Alignm length: | 349 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 276, 57 |
| Conread position: | 66-645 |
| Cow position: | |
| Alignm length: | 592 |
| Alignm identity: | 376 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 276, 74 |
| Conread position: | 72-790 |
| Cow position: | |
| Alignm length: | 762 |
| Alignm identity: | 498 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 301, 50 |
| Conread position: | 75-800 |
| Cow position: | |
| Alignm length: | 773 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 47 |
| Conread position: | 76-492 |
| Cow position: | |
| Alignm length: | 419 |
| Alignm identity: | 288 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 280, 31 |
| Conread position: | 77-784 |
| Cow position: | |
| Alignm length: | 724 |
| Alignm identity: | 483 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 297, 45 |
| Conread position: | 92-440 |
| Cow position: | |
| Alignm length: | 353 |
| Alignm identity: | 237 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 254, 29 |
| Conread position: | 92-784 |
| Cow position: | |
| Alignm length: | 714 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 288, 24 |
| Conread position: | 102-787 |
| Cow position: | |
| Alignm length: | 710 |
| Alignm identity: | 477 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 272, 18 |
| Conread position: | 106-804 |
| Cow position: | |
| Alignm length: | 702 |
| Alignm identity: | 446 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 171, 102 |
| Conread position: | 113-508 |
| Cow position: | |
| Alignm length: | 405 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 242, 246 |
| Conread position: | 125-784 |
| Cow position: | |
| Alignm length: | 686 |
| Alignm identity: | 435 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 255, 87 |
| Conread position: | 126-689 |
| Cow position: | |
| Alignm length: | 585 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 100 |
| Conread position: | 126-800 |
| Cow position: | |
| Alignm length: | 703 |
| Alignm identity: | 470 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 248, 24 |
| Conread position: | 129-462 |
| Cow position: | |
| Alignm length: | 354 |
| Alignm identity: | 241 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 152-779 |
| Cow position: | |
| Alignm length: | 642 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 8 |
| Conread position: | 153-753 |
| Cow position: | |
| Alignm length: | 621 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 241, 73 |
| Conread position: | 168-639 |
| Cow position: | |
| Alignm length: | 482 |
| Alignm identity: | 318 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 214, 58 |
| Conread position: | 248-800 |
| Cow position: | |
| Alignm length: | 561 |
| Alignm identity: | 351 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 122, 40 |
| Conread position: | 249-411 |
| Cow position: | |
| Alignm length: | 165 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 249-411 |
| Cow position: | |
| Alignm length: | 166 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 48, 93 |
| Conread position: | 255-627 |
| Cow position: | |
| Alignm length: | 392 |
| Alignm identity: | 254 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 118, 80 |
| Conread position: | 279-655 |
| Cow position: | |
| Alignm length: | 391 |
| Alignm identity: | 268 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 34, 136 |
| Conread position: | 290-800 |
| Cow position: | |
| Alignm length: | 526 |
| Alignm identity: | 337 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 221, 87 |
| Conread position: | 297-508 |
| Cow position: | |
| Alignm length: | 218 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 77, 10 |
| Conread position: | 298-800 |
| Cow position: | |
| Alignm length: | 519 |
| Alignm identity: | 339 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 188, 89 |
| Conread position: | 299-498 |
| Cow position: | |
| Alignm length: | 211 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 41, 168 |
| Conread position: | 299-704 |
| Cow position: | |
| Alignm length: | 421 |
| Alignm identity: | 280 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 73, 108 |
| Conread position: | 304-790 |
| Cow position: | |
| Alignm length: | 511 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 239 |
| Conread position: | 307-748 |
| Cow position: | |
| Alignm length: | 470 |
| Alignm identity: | 313 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 67, 240 |
| Conread position: | 311-784 |
| Cow position: | |
| Alignm length: | 498 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 104 |
| Conread position: | 319-784 |
| Cow position: | |
| Alignm length: | 478 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 14 |
| Conread position: | 323-800 |
| Cow position: | |
| Alignm length: | 497 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 87 |
| Conread position: | 329-787 |
| Cow position: | |
| Alignm length: | 482 |
| Alignm identity: | 318 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 51, 94 |
| Conread position: | 339-652 |
| Cow position: | |
| Alignm length: | 332 |
| Alignm identity: | 223 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 16, 10 |
| Conread position: | 341-800 |
| Cow position: | |
| Alignm length: | 475 |
| Alignm identity: | 309 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 29, 106 |
| Conread position: | 358-790 |
| Cow position: | |
| Alignm length: | 452 |
| Alignm identity: | 291 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 16, 60 |
| Conread position: | 379-799 |
| Cow position: | |
| Alignm length: | 445 |
| Alignm identity: | 293 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 16, 35 |
| Conread position: | 406-777 |
| Cow position: | |
| Alignm length: | 382 |
| Alignm identity: | 254 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 78, 18 |
| Conread position: | 413-800 |
| Cow position: | |
| Alignm length: | 411 |
| Alignm identity: | 267 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 80, 147 |
| Conread position: | 425-800 |
| Cow position: | |
| Alignm length: | 389 |
| Alignm identity: | 246 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 61, 116 |
| Conread position: | 535-784 |
| Cow position: | |
| Alignm length: | 261 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 15, 226 |
Show alignments to all cow chromosomes.