Cow genome map
Conread name: | Ss1.1-Thy1-THY010064A03.5 |
Conread position: | 52-791 |
Cow position: | chr26:881067-881768 (view UCSC Genome Browser custom track) |
Alignm length: | 752 |
Alignm identity: | 500 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 243, 68 |
Conread position: | 53-781 |
Cow position: | chr26:12667288-12668023 (view UCSC Genome Browser custom track) |
Alignm length: | 763 |
Alignm identity: | 501 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 325, 62 |
Conread position: | 54-237 |
Cow position: | chr26:6817502-6817679 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 138 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 66, 0 |
Conread position: | 54-352 |
Cow position: | chr26:27989416-27989125 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 212 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 68, 0 |
Conread position: | 54-393 |
Cow position: | chr26:8871692-8872014 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 320, 66 |
Conread position: | 54-404 |
Cow position: | chr26:3250707-3250373 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 320, 66 |
Conread position: | 54-472 |
Cow position: | chr26:6847600-6847192 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 179 |
Conread position: | 54-671 |
Cow position: | chr26:3226231-3225623 (view UCSC Genome Browser custom track) |
Alignm length: | 635 |
Alignm identity: | 429 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 320, 66 |
Conread position: | 54-717 |
Cow position: | chr26:2350341-2349681 (view UCSC Genome Browser custom track) |
Alignm length: | 688 |
Alignm identity: | 481 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 301, 69 |
Conread position: | 54-717 |
Cow position: | chr26:17322500-17323167 (view UCSC Genome Browser custom track) |
Alignm length: | 691 |
Alignm identity: | 445 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 318, 65 |
Conread position: | 54-726 |
Cow position: | chr26:4327588-4326919 (view UCSC Genome Browser custom track) |
Alignm length: | 698 |
Alignm identity: | 464 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 327, 62 |
Conread position: | 54-731 |
Cow position: | chr26:616409-615746 (view UCSC Genome Browser custom track) |
Alignm length: | 705 |
Alignm identity: | 462 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 142, 68 |
Conread position: | 54-764 |
Cow position: | chr26:23888251-23888951 (view UCSC Genome Browser custom track) |
Alignm length: | 734 |
Alignm identity: | 502 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 320, 56 |
Conread position: | 54-766 |
Cow position: | chr26:8086938-8087622 (view UCSC Genome Browser custom track) |
Alignm length: | 730 |
Alignm identity: | 473 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 125, 24 |
Conread position: | 54-784 |
Cow position: | chr26:9113736-9114472 (view UCSC Genome Browser custom track) |
Alignm length: | 760 |
Alignm identity: | 522 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 320, 66 |
Conread position: | 54-784 |
Cow position: | chr26:12586695-12585978 (view UCSC Genome Browser custom track) |
Alignm length: | 742 |
Alignm identity: | 500 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 320, 68 |
Conread position: | 54-784 |
Cow position: | chr26:30784604-30785333 (view UCSC Genome Browser custom track) |
Alignm length: | 757 |
Alignm identity: | 511 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 326, 66 |
Conread position: | 54-790 |
Cow position: | chr26:898248-898969 (view UCSC Genome Browser custom track) |
Alignm length: | 752 |
Alignm identity: | 505 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 320, 68 |
Conread position: | 54-800 |
Cow position: | chr26:6424811-6425573 (view UCSC Genome Browser custom track) |
Alignm length: | 783 |
Alignm identity: | 527 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 105, 65 |
Conread position: | 54-800 |
Cow position: | chr26:14895801-14896545 (view UCSC Genome Browser custom track) |
Alignm length: | 773 |
Alignm identity: | 530 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 236, 65 |
Conread position: | 54-800 |
Cow position: | chr26:21824823-21824082 (view UCSC Genome Browser custom track) |
Alignm length: | 778 |
Alignm identity: | 515 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 318, 68 |
Conread position: | 54-800 |
Cow position: | chr26:30587513-30586771 (view UCSC Genome Browser custom track) |
Alignm length: | 770 |
Alignm identity: | 514 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 317, 65 |
Conread position: | 59-330 |
Cow position: | chr26:9560721-9560474 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 195 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 59-784 |
Cow position: | chr26:5676995-5677717 (view UCSC Genome Browser custom track) |
Alignm length: | 746 |
Alignm identity: | 504 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 313, 60 |
Conread position: | 61-237 |
Cow position: | chr26:577444-577274 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 131 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 59, 0 |
Conread position: | 61-348 |
Cow position: | chr26:6081544-6081278 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 204 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 61-492 |
Cow position: | chr26:13194630-13194219 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 294 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 292, 44 |
Conread position: | 61-784 |
Cow position: | chr26:19349655-19348932 (view UCSC Genome Browser custom track) |
Alignm length: | 754 |
Alignm identity: | 520 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 143, 58 |
Conread position: | 61-800 |
Cow position: | chr26:9842552-9841829 (view UCSC Genome Browser custom track) |
Alignm length: | 758 |
Alignm identity: | 486 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 286, 41 |
Conread position: | 61-803 |
Cow position: | chr26:14366392-14365652 (view UCSC Genome Browser custom track) |
Alignm length: | 769 |
Alignm identity: | 506 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 78 |
Conread position: | 62-354 |
Cow position: | chr26:8281959-8281678 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 208 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 163, 31 |
Conread position: | 64-800 |
Cow position: | chr26:17326012-17326740 (view UCSC Genome Browser custom track) |
Alignm length: | 760 |
Alignm identity: | 526 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 330, 55 |
Conread position: | 64-804 |
Cow position: | chr26:17395047-17394309 (view UCSC Genome Browser custom track) |
Alignm length: | 759 |
Alignm identity: | 508 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 316, 55 |
Conread position: | 65-498 |
Cow position: | chr26:2388415-2388811 (view UCSC Genome Browser custom track) |
Alignm length: | 436 |
Alignm identity: | 288 |
Alignm E-value: | 7e-30 |
Alignm gaps (pig, cow): | 307, 67 |
Conread position: | 65-693 |
Cow position: | chr26:11288121-11288725 (view UCSC Genome Browser custom track) |
Alignm length: | 639 |
Alignm identity: | 401 |
Alignm E-value: | 5e-37 |
Alignm gaps (pig, cow): | 427, 77 |
Conread position: | 67-784 |
Cow position: | chr26:34013529-34014254 (view UCSC Genome Browser custom track) |
Alignm length: | 748 |
Alignm identity: | 511 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 70 |
Conread position: | 78-784 |
Cow position: | chr26:35561067-35561764 (view UCSC Genome Browser custom track) |
Alignm length: | 732 |
Alignm identity: | 475 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 296, 42 |
Conread position: | 88-652 |
Cow position: | chr26:4603282-4602733 (view UCSC Genome Browser custom track) |
Alignm length: | 582 |
Alignm identity: | 388 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 288, 34 |
Conread position: | 90-747 |
Cow position: | chr26:15145113-15145744 (view UCSC Genome Browser custom track) |
Alignm length: | 675 |
Alignm identity: | 443 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 290, 30 |
Conread position: | 98-484 |
Cow position: | chr26:2200512-2200876 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 276, 22 |
Conread position: | 123-629 |
Cow position: | chr26:21008065-21008564 (view UCSC Genome Browser custom track) |
Alignm length: | 523 |
Alignm identity: | 337 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 219, 44 |
Conread position: | 124-614 |
Cow position: | chr26:8004877-8005361 (view UCSC Genome Browser custom track) |
Alignm length: | 505 |
Alignm identity: | 316 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 126, 55 |
Conread position: | 126-790 |
Cow position: | chr26:3028729-3028058 (view UCSC Genome Browser custom track) |
Alignm length: | 694 |
Alignm identity: | 462 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 248, 100 |
Conread position: | 130-416 |
Cow position: | chr26:8910422-8910157 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 199 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 244, 42 |
Conread position: | 136-793 |
Cow position: | chr26:19011849-19012507 (view UCSC Genome Browser custom track) |
Alignm length: | 675 |
Alignm identity: | 421 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 136, 43 |
Conread position: | 153-784 |
Cow position: | chr26:18034837-18035472 (view UCSC Genome Browser custom track) |
Alignm length: | 657 |
Alignm identity: | 433 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 88 |
Conread position: | 248-697 |
Cow position: | chr26:35336181-35335727 (view UCSC Genome Browser custom track) |
Alignm length: | 471 |
Alignm identity: | 311 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 128, 35 |
Conread position: | 249-782 |
Cow position: | chr26:6497593-6497056 (view UCSC Genome Browser custom track) |
Alignm length: | 552 |
Alignm identity: | 369 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 134, 17 |
Conread position: | 249-790 |
Cow position: | chr26:1884807-1884268 (view UCSC Genome Browser custom track) |
Alignm length: | 556 |
Alignm identity: | 360 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 122, 161 |
Conread position: | 251-484 |
Cow position: | chr26:13801214-13801442 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 162 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 130, 64 |
Conread position: | 255-510 |
Cow position: | chr26:22585306-22585052 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 185 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 121, 44 |
Conread position: | 272-416 |
Cow position: | chr26:8215696-8215547 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 112 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 283-731 |
Cow position: | chr26:32051688-32051243 (view UCSC Genome Browser custom track) |
Alignm length: | 462 |
Alignm identity: | 308 |
Alignm E-value: | 7e-40 |
Alignm gaps (pig, cow): | 89, 64 |
Conread position: | 288-671 |
Cow position: | chr26:9560466-9560079 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 268 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 84, 122 |
Conread position: | 296-776 |
Cow position: | chr26:3703085-3703588 (view UCSC Genome Browser custom track) |
Alignm length: | 509 |
Alignm identity: | 330 |
Alignm E-value: | 6e-39 |
Alignm gaps (pig, cow): | 103, 33 |
Conread position: | 298-800 |
Cow position: | chr26:17430432-17429928 (view UCSC Genome Browser custom track) |
Alignm length: | 520 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 74, 112 |
Conread position: | 319-790 |
Cow position: | chr26:2418318-2417831 (view UCSC Genome Browser custom track) |
Alignm length: | 497 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 96 |
Conread position: | 323-790 |
Cow position: | chr26:366714-367197 (view UCSC Genome Browser custom track) |
Alignm length: | 491 |
Alignm identity: | 321 |
Alignm E-value: | 7.00005e-41 |
Alignm gaps (pig, cow): | 51, 87 |
Conread position: | 339-752 |
Cow position: | chr26:4750329-4749905 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 293 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 12, 78 |
Conread position: | 388-764 |
Cow position: | chr26:11265077-11265448 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 250 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 7, 12 |
Conread position: | 436-781 |
Cow position: | chr26:30754196-30753832 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 241 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 58, 125 |
Conread position: | 436-784 |
Cow position: | chr26:6792407-6792769 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 240 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 55, 114 |
Conread position: | 445-784 |
Cow position: | chr26:32933313-32932959 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 231 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 49, 105 |
Conread position: | 446-801 |
Cow position: | chr26:35123041-35122667 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 240 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 48, 104 |
Conread position: | 548-779 |
Cow position: | chr26:34824547-34824318 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 167 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 128, 71 |
Conread position: | 599-800 |
Cow position: | chr26:625483-625278 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 144 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 29, 20 |
Show alignments to all cow chromosomes.