Cow genome map

Conread name: Ss1.1-Thy1-THY010064A03.5

Conread position: 52-791
Cow position: chr26:881067-881768 (view UCSC Genome Browser custom track)
Alignm length: 752
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 68

Conread position: 53-781
Cow position: chr26:12667288-12668023 (view UCSC Genome Browser custom track)
Alignm length: 763
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 325, 62

Conread position: 54-237
Cow position: chr26:6817502-6817679 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 66, 0

Conread position: 54-352
Cow position: chr26:27989416-27989125 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 212
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 68, 0

Conread position: 54-393
Cow position: chr26:8871692-8872014 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 66

Conread position: 54-404
Cow position: chr26:3250707-3250373 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 66

Conread position: 54-472
Cow position: chr26:6847600-6847192 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 179

Conread position: 54-671
Cow position: chr26:3226231-3225623 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 66

Conread position: 54-717
Cow position: chr26:2350341-2349681 (view UCSC Genome Browser custom track)
Alignm length: 688
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 301, 69

Conread position: 54-717
Cow position: chr26:17322500-17323167 (view UCSC Genome Browser custom track)
Alignm length: 691
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 65

Conread position: 54-726
Cow position: chr26:4327588-4326919 (view UCSC Genome Browser custom track)
Alignm length: 698
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 327, 62

Conread position: 54-731
Cow position: chr26:616409-615746 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 68

Conread position: 54-764
Cow position: chr26:23888251-23888951 (view UCSC Genome Browser custom track)
Alignm length: 734
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 56

Conread position: 54-766
Cow position: chr26:8086938-8087622 (view UCSC Genome Browser custom track)
Alignm length: 730
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 24

Conread position: 54-784
Cow position: chr26:9113736-9114472 (view UCSC Genome Browser custom track)
Alignm length: 760
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 66

Conread position: 54-784
Cow position: chr26:12586695-12585978 (view UCSC Genome Browser custom track)
Alignm length: 742
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 68

Conread position: 54-784
Cow position: chr26:30784604-30785333 (view UCSC Genome Browser custom track)
Alignm length: 757
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 326, 66

Conread position: 54-790
Cow position: chr26:898248-898969 (view UCSC Genome Browser custom track)
Alignm length: 752
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 68

Conread position: 54-800
Cow position: chr26:6424811-6425573 (view UCSC Genome Browser custom track)
Alignm length: 783
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 65

Conread position: 54-800
Cow position: chr26:14895801-14896545 (view UCSC Genome Browser custom track)
Alignm length: 773
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 65

Conread position: 54-800
Cow position: chr26:21824823-21824082 (view UCSC Genome Browser custom track)
Alignm length: 778
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 68

Conread position: 54-800
Cow position: chr26:30587513-30586771 (view UCSC Genome Browser custom track)
Alignm length: 770
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 65

Conread position: 59-330
Cow position: chr26:9560721-9560474 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 195
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 48, 0

Conread position: 59-784
Cow position: chr26:5676995-5677717 (view UCSC Genome Browser custom track)
Alignm length: 746
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 60

Conread position: 61-237
Cow position: chr26:577444-577274 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 59, 0

Conread position: 61-348
Cow position: chr26:6081544-6081278 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 204
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 58, 0

Conread position: 61-492
Cow position: chr26:13194630-13194219 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 294
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 292, 44

Conread position: 61-784
Cow position: chr26:19349655-19348932 (view UCSC Genome Browser custom track)
Alignm length: 754
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 58

Conread position: 61-800
Cow position: chr26:9842552-9841829 (view UCSC Genome Browser custom track)
Alignm length: 758
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 41

Conread position: 61-803
Cow position: chr26:14366392-14365652 (view UCSC Genome Browser custom track)
Alignm length: 769
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 78

Conread position: 62-354
Cow position: chr26:8281959-8281678 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 208
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 163, 31

Conread position: 64-800
Cow position: chr26:17326012-17326740 (view UCSC Genome Browser custom track)
Alignm length: 760
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 330, 55

Conread position: 64-804
Cow position: chr26:17395047-17394309 (view UCSC Genome Browser custom track)
Alignm length: 759
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 316, 55

Conread position: 65-498
Cow position: chr26:2388415-2388811 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 288
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 307, 67

Conread position: 65-693
Cow position: chr26:11288121-11288725 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 401
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 427, 77

Conread position: 67-784
Cow position: chr26:34013529-34014254 (view UCSC Genome Browser custom track)
Alignm length: 748
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 70

Conread position: 78-784
Cow position: chr26:35561067-35561764 (view UCSC Genome Browser custom track)
Alignm length: 732
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 42

Conread position: 88-652
Cow position: chr26:4603282-4602733 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 34

Conread position: 90-747
Cow position: chr26:15145113-15145744 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 30

Conread position: 98-484
Cow position: chr26:2200512-2200876 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 22

Conread position: 123-629
Cow position: chr26:21008065-21008564 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 337
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 219, 44

Conread position: 124-614
Cow position: chr26:8004877-8005361 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 316
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 126, 55

Conread position: 126-790
Cow position: chr26:3028729-3028058 (view UCSC Genome Browser custom track)
Alignm length: 694
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 100

Conread position: 130-416
Cow position: chr26:8910422-8910157 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 199
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 244, 42

Conread position: 136-793
Cow position: chr26:19011849-19012507 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 421
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 136, 43

Conread position: 153-784
Cow position: chr26:18034837-18035472 (view UCSC Genome Browser custom track)
Alignm length: 657
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 88

Conread position: 248-697
Cow position: chr26:35336181-35335727 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 311
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 128, 35

Conread position: 249-782
Cow position: chr26:6497593-6497056 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 17

Conread position: 249-790
Cow position: chr26:1884807-1884268 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 161

Conread position: 251-484
Cow position: chr26:13801214-13801442 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 162
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 130, 64

Conread position: 255-510
Cow position: chr26:22585306-22585052 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 185
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 121, 44

Conread position: 272-416
Cow position: chr26:8215696-8215547 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 283-731
Cow position: chr26:32051688-32051243 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 308
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 89, 64

Conread position: 288-671
Cow position: chr26:9560466-9560079 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 268
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 84, 122

Conread position: 296-776
Cow position: chr26:3703085-3703588 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 330
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 103, 33

Conread position: 298-800
Cow position: chr26:17430432-17429928 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 112

Conread position: 319-790
Cow position: chr26:2418318-2417831 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 96

Conread position: 323-790
Cow position: chr26:366714-367197 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 321
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 51, 87

Conread position: 339-752
Cow position: chr26:4750329-4749905 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 293
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 12, 78

Conread position: 388-764
Cow position: chr26:11265077-11265448 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 250
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 7, 12

Conread position: 436-781
Cow position: chr26:30754196-30753832 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 241
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 58, 125

Conread position: 436-784
Cow position: chr26:6792407-6792769 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 240
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 55, 114

Conread position: 445-784
Cow position: chr26:32933313-32932959 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 231
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 49, 105

Conread position: 446-801
Cow position: chr26:35123041-35122667 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 240
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 48, 104

Conread position: 548-779
Cow position: chr26:34824547-34824318 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 167
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 128, 71

Conread position: 599-800
Cow position: chr26:625483-625278 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 144
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 29, 20

Show alignments to all cow chromosomes.