Cow genome map
| Conread name: | Ss1.1-Thy1-THY010064A03.5 |
| Conread position: | 51-704 |
| Cow position: | chr28:30921441-30920813 (view UCSC Genome Browser custom track) |
| Alignm length: | 668 |
| Alignm identity: | 426 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 12, 39 |
| Conread position: | 52-443 |
| Cow position: | chr28:15940134-15939769 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 263 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 133, 10 |
| Conread position: | 52-492 |
| Cow position: | chr28:18099670-18099240 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 7 |
| Conread position: | 53-751 |
| Cow position: | chr28:24669441-24670128 (view UCSC Genome Browser custom track) |
| Alignm length: | 724 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 319, 64 |
| Conread position: | 53-800 |
| Cow position: | chr28:1215995-1215255 (view UCSC Genome Browser custom track) |
| Alignm length: | 768 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 319, 66 |
| Conread position: | 53-800 |
| Cow position: | chr28:17665483-17664747 (view UCSC Genome Browser custom track) |
| Alignm length: | 771 |
| Alignm identity: | 521 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 319, 66 |
| Conread position: | 53-804 |
| Cow position: | chr28:784501-785249 (view UCSC Genome Browser custom track) |
| Alignm length: | 777 |
| Alignm identity: | 531 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 84 |
| Conread position: | 54-182 |
| Cow position: | chr28:7058823-7058700 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 54-232 |
| Cow position: | chr28:23024063-23024237 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 6, 62 |
| Conread position: | 54-235 |
| Cow position: | chr28:15998948-15999123 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 54-237 |
| Cow position: | chr28:31591404-31591579 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 54-446 |
| Cow position: | chr28:18518602-18518227 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 318, 57 |
| Conread position: | 54-453 |
| Cow position: | chr28:6778096-6777718 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 320, 66 |
| Conread position: | 54-492 |
| Cow position: | chr28:307997-307591 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 341, 66 |
| Conread position: | 54-492 |
| Cow position: | chr28:17630944-17631359 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 320, 68 |
| Conread position: | 54-510 |
| Cow position: | chr28:30478450-30478019 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 296 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 218, 18 |
| Conread position: | 54-590 |
| Cow position: | chr28:5766585-5767109 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 226, 67 |
| Conread position: | 54-617 |
| Cow position: | chr28:2121298-2121848 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 328, 41 |
| Conread position: | 54-639 |
| Cow position: | chr28:1459940-1460512 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 320, 66 |
| Conread position: | 54-689 |
| Cow position: | chr28:5567996-5568613 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 66 |
| Conread position: | 54-691 |
| Cow position: | chr28:30805605-30806236 (view UCSC Genome Browser custom track) |
| Alignm length: | 658 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 320, 68 |
| Conread position: | 54-724 |
| Cow position: | chr28:26424416-26423761 (view UCSC Genome Browser custom track) |
| Alignm length: | 692 |
| Alignm identity: | 459 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 323, 65 |
| Conread position: | 54-752 |
| Cow position: | chr28:10644625-10643955 (view UCSC Genome Browser custom track) |
| Alignm length: | 711 |
| Alignm identity: | 478 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 329, 59 |
| Conread position: | 54-779 |
| Cow position: | chr28:1166049-1165329 (view UCSC Genome Browser custom track) |
| Alignm length: | 753 |
| Alignm identity: | 512 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 318, 56 |
| Conread position: | 54-779 |
| Cow position: | chr28:1955200-1955926 (view UCSC Genome Browser custom track) |
| Alignm length: | 755 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 317, 66 |
| Conread position: | 54-784 |
| Cow position: | chr28:5209956-5210681 (view UCSC Genome Browser custom track) |
| Alignm length: | 755 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 318, 65 |
| Conread position: | 54-784 |
| Cow position: | chr28:6536958-6536235 (view UCSC Genome Browser custom track) |
| Alignm length: | 757 |
| Alignm identity: | 508 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 320, 66 |
| Conread position: | 54-784 |
| Cow position: | chr28:7003845-7004567 (view UCSC Genome Browser custom track) |
| Alignm length: | 753 |
| Alignm identity: | 501 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 318, 56 |
| Conread position: | 54-784 |
| Cow position: | chr28:8380881-8381608 (view UCSC Genome Browser custom track) |
| Alignm length: | 757 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 318, 66 |
| Conread position: | 54-784 |
| Cow position: | chr28:10471497-10472215 (view UCSC Genome Browser custom track) |
| Alignm length: | 759 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 318, 65 |
| Conread position: | 54-784 |
| Cow position: | chr28:11504396-11503662 (view UCSC Genome Browser custom track) |
| Alignm length: | 761 |
| Alignm identity: | 513 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 318, 68 |
| Conread position: | 54-784 |
| Cow position: | chr28:24590701-24591433 (view UCSC Genome Browser custom track) |
| Alignm length: | 759 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 288, 66 |
| Conread position: | 54-784 |
| Cow position: | chr28:24884690-24885420 (view UCSC Genome Browser custom track) |
| Alignm length: | 756 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 320, 67 |
| Conread position: | 54-784 |
| Cow position: | chr28:32790554-32789823 (view UCSC Genome Browser custom track) |
| Alignm length: | 749 |
| Alignm identity: | 498 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 318, 65 |
| Conread position: | 54-800 |
| Cow position: | chr28:1506711-1507451 (view UCSC Genome Browser custom track) |
| Alignm length: | 772 |
| Alignm identity: | 497 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 282, 37 |
| Conread position: | 54-800 |
| Cow position: | chr28:1813095-1812363 (view UCSC Genome Browser custom track) |
| Alignm length: | 765 |
| Alignm identity: | 513 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 340, 65 |
| Conread position: | 54-800 |
| Cow position: | chr28:3190407-3189664 (view UCSC Genome Browser custom track) |
| Alignm length: | 769 |
| Alignm identity: | 528 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 318, 65 |
| Conread position: | 54-800 |
| Cow position: | chr28:12408378-12407638 (view UCSC Genome Browser custom track) |
| Alignm length: | 771 |
| Alignm identity: | 535 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 318, 65 |
| Conread position: | 54-800 |
| Cow position: | chr28:13461805-13462539 (view UCSC Genome Browser custom track) |
| Alignm length: | 770 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 326, 65 |
| Conread position: | 54-800 |
| Cow position: | chr28:17390248-17390990 (view UCSC Genome Browser custom track) |
| Alignm length: | 774 |
| Alignm identity: | 530 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 326, 65 |
| Conread position: | 54-800 |
| Cow position: | chr28:22259312-22258590 (view UCSC Genome Browser custom track) |
| Alignm length: | 766 |
| Alignm identity: | 513 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 65 |
| Conread position: | 54-800 |
| Cow position: | chr28:33254148-33254898 (view UCSC Genome Browser custom track) |
| Alignm length: | 770 |
| Alignm identity: | 513 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 127 |
| Conread position: | 54-800 |
| Cow position: | chr28:33638383-33639145 (view UCSC Genome Browser custom track) |
| Alignm length: | 781 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 311, 67 |
| Conread position: | 54-801 |
| Cow position: | chr28:21567741-21568483 (view UCSC Genome Browser custom track) |
| Alignm length: | 780 |
| Alignm identity: | 540 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 326, 55 |
| Conread position: | 54-804 |
| Cow position: | chr28:5939332-5940068 (view UCSC Genome Browser custom track) |
| Alignm length: | 768 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 318, 32 |
| Conread position: | 55-494 |
| Cow position: | chr28:14703538-14703120 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 317, 64 |
| Conread position: | 55-629 |
| Cow position: | chr28:34201809-34201225 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 351 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 78, 63 |
| Conread position: | 55-800 |
| Cow position: | chr28:15034266-15033503 (view UCSC Genome Browser custom track) |
| Alignm length: | 786 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 63 |
| Conread position: | 56-400 |
| Cow position: | chr28:759373-759046 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 326, 46 |
| Conread position: | 56-804 |
| Cow position: | chr28:5749857-5749123 (view UCSC Genome Browser custom track) |
| Alignm length: | 766 |
| Alignm identity: | 525 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 314, 63 |
| Conread position: | 57-511 |
| Cow position: | chr28:34420386-34420813 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 300 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 121, 62 |
| Conread position: | 58-652 |
| Cow position: | chr28:10293307-10293893 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 79 |
| Conread position: | 59-190 |
| Cow position: | chr28:13604808-13604934 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 101 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 59-411 |
| Cow position: | chr28:11953811-11954167 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 263 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 180, 44 |
| Conread position: | 59-800 |
| Cow position: | chr28:34596081-34596822 (view UCSC Genome Browser custom track) |
| Alignm length: | 774 |
| Alignm identity: | 513 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 132 |
| Conread position: | 60-800 |
| Cow position: | chr28:2086316-2087040 (view UCSC Genome Browser custom track) |
| Alignm length: | 761 |
| Alignm identity: | 521 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 317, 50 |
| Conread position: | 61-332 |
| Cow position: | chr28:9295235-9294986 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 195 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 61-411 |
| Cow position: | chr28:483742-483408 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 313, 59 |
| Conread position: | 61-472 |
| Cow position: | chr28:7742279-7742668 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 311, 55 |
| Conread position: | 61-473 |
| Cow position: | chr28:17188111-17188493 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 274 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 311, 71 |
| Conread position: | 61-693 |
| Cow position: | chr28:21361344-21361966 (view UCSC Genome Browser custom track) |
| Alignm length: | 651 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 61 |
| Conread position: | 61-784 |
| Cow position: | chr28:12152173-12152919 (view UCSC Genome Browser custom track) |
| Alignm length: | 766 |
| Alignm identity: | 508 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 20 |
| Conread position: | 61-784 |
| Cow position: | chr28:15918692-15917961 (view UCSC Genome Browser custom track) |
| Alignm length: | 758 |
| Alignm identity: | 496 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 175 |
| Conread position: | 61-784 |
| Cow position: | chr28:23311456-23310754 (view UCSC Genome Browser custom track) |
| Alignm length: | 747 |
| Alignm identity: | 501 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 313, 36 |
| Conread position: | 61-799 |
| Cow position: | chr28:21378377-21379111 (view UCSC Genome Browser custom track) |
| Alignm length: | 768 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 62 |
| Conread position: | 61-800 |
| Cow position: | chr28:10580023-10579281 (view UCSC Genome Browser custom track) |
| Alignm length: | 768 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 312, 58 |
| Conread position: | 62-199 |
| Cow position: | chr28:15685328-15685462 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 64-696 |
| Cow position: | chr28:7027928-7027306 (view UCSC Genome Browser custom track) |
| Alignm length: | 651 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 278, 59 |
| Conread position: | 65-691 |
| Cow position: | chr28:32304393-32303769 (view UCSC Genome Browser custom track) |
| Alignm length: | 651 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 262, 53 |
| Conread position: | 65-726 |
| Cow position: | chr28:8785293-8785942 (view UCSC Genome Browser custom track) |
| Alignm length: | 688 |
| Alignm identity: | 454 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 43 |
| Conread position: | 65-800 |
| Cow position: | chr28:8719105-8718396 (view UCSC Genome Browser custom track) |
| Alignm length: | 755 |
| Alignm identity: | 502 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 312, 43 |
| Conread position: | 67-600 |
| Cow position: | chr28:5800154-5800669 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 167 |
| Conread position: | 79-416 |
| Cow position: | chr28:7706814-7706498 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 242 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 5, 14 |
| Conread position: | 103-411 |
| Cow position: | chr28:1773266-1773555 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 222 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 269, 19 |
| Conread position: | 103-777 |
| Cow position: | chr28:3014081-3013415 (view UCSC Genome Browser custom track) |
| Alignm length: | 702 |
| Alignm identity: | 465 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 33 |
| Conread position: | 110-661 |
| Cow position: | chr28:24559790-24560346 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 17 |
| Conread position: | 123-787 |
| Cow position: | chr28:25168255-25167590 (view UCSC Genome Browser custom track) |
| Alignm length: | 695 |
| Alignm identity: | 447 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 185, 12 |
| Conread position: | 124-688 |
| Cow position: | chr28:15674227-15674776 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 366 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 51, 97 |
| Conread position: | 126-784 |
| Cow position: | chr28:9180773-9181434 (view UCSC Genome Browser custom track) |
| Alignm length: | 683 |
| Alignm identity: | 453 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 248, 100 |
| Conread position: | 130-469 |
| Cow position: | chr28:31851753-31851431 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 201, 7 |
| Conread position: | 146-790 |
| Cow position: | chr28:7828420-7829058 (view UCSC Genome Browser custom track) |
| Alignm length: | 662 |
| Alignm identity: | 446 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 228, 80 |
| Conread position: | 149-787 |
| Cow position: | chr28:10459288-10458664 (view UCSC Genome Browser custom track) |
| Alignm length: | 657 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 245, 77 |
| Conread position: | 150-484 |
| Cow position: | chr28:25025298-25025608 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 227, 18 |
| Conread position: | 150-764 |
| Cow position: | chr28:22041467-22040854 (view UCSC Genome Browser custom track) |
| Alignm length: | 636 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 76 |
| Conread position: | 151-784 |
| Cow position: | chr28:11788668-11788033 (view UCSC Genome Browser custom track) |
| Alignm length: | 658 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 76 |
| Conread position: | 153-784 |
| Cow position: | chr28:29822135-29822747 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 219, 50 |
| Conread position: | 156-796 |
| Cow position: | chr28:29760691-29760056 (view UCSC Genome Browser custom track) |
| Alignm length: | 664 |
| Alignm identity: | 454 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 69 |
| Conread position: | 157-507 |
| Cow position: | chr28:13605104-13605443 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 215, 69 |
| Conread position: | 158-453 |
| Cow position: | chr28:30096342-30096620 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 236, 68 |
| Conread position: | 158-800 |
| Cow position: | chr28:15588044-15588685 (view UCSC Genome Browser custom track) |
| Alignm length: | 674 |
| Alignm identity: | 446 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 57 |
| Conread position: | 167-411 |
| Cow position: | chr28:13447167-13446933 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 109, 59 |
| Conread position: | 210-510 |
| Cow position: | chr28:19401081-19400789 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 164, 41 |
| Conread position: | 237-781 |
| Cow position: | chr28:15353090-15352543 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 362 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 24, 166 |
| Conread position: | 248-790 |
| Cow position: | chr28:28927843-28928398 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 167 |
| Conread position: | 249-492 |
| Cow position: | chr28:29783342-29783105 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 46, 92 |
| Conread position: | 249-510 |
| Cow position: | chr28:25092811-25092553 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 127, 155 |
| Conread position: | 249-611 |
| Cow position: | chr28:22235551-22235189 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 88, 247 |
| Conread position: | 249-759 |
| Cow position: | chr28:33767040-33767559 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 344 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 48, 34 |
| Conread position: | 249-784 |
| Cow position: | chr28:34581932-34582483 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 161 |
| Conread position: | 251-714 |
| Cow position: | chr28:25675983-25675511 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 32 |
| Conread position: | 251-762 |
| Cow position: | chr28:14231286-14230772 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 347 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 53, 74 |
| Conread position: | 252-492 |
| Cow position: | chr28:15607426-15607663 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 119, 140 |
| Conread position: | 252-656 |
| Cow position: | chr28:24622032-24621645 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 277 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 65, 45 |
| Conread position: | 262-492 |
| Cow position: | chr28:24303372-24303145 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 112, 148 |
| Conread position: | 265-800 |
| Cow position: | chr28:23024244-23024758 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 354 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 107, 145 |
| Conread position: | 271-479 |
| Cow position: | chr28:29101228-29101022 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 103, 139 |
| Conread position: | 279-784 |
| Cow position: | chr28:5635880-5636389 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 136 |
| Conread position: | 281-613 |
| Cow position: | chr28:5823952-5824289 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 8, 57 |
| Conread position: | 288-689 |
| Cow position: | chr28:6813442-6813042 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 266 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 82, 19 |
| Conread position: | 297-800 |
| Cow position: | chr28:22578797-22579314 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 56 |
| Conread position: | 298-784 |
| Cow position: | chr28:34729993-34730473 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 25 |
| Conread position: | 300-784 |
| Cow position: | chr28:15685476-15685970 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 110 |
| Conread position: | 302-784 |
| Cow position: | chr28:30959679-30960177 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 114 |
| Conread position: | 304-778 |
| Cow position: | chr28:14491448-14491899 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 313 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 82, 29 |
| Conread position: | 305-799 |
| Cow position: | chr28:10616978-10616467 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 14 |
| Conread position: | 315-784 |
| Cow position: | chr28:10301919-10302401 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 95 |
| Conread position: | 316-501 |
| Cow position: | chr28:30368580-30368764 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 66, 31 |
| Conread position: | 322-503 |
| Cow position: | chr28:4448590-4448412 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 52, 88 |
| Conread position: | 328-784 |
| Cow position: | chr28:1385341-1384873 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 315 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 55, 82 |
| Conread position: | 330-784 |
| Cow position: | chr28:7335073-7335552 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 322 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 44, 80 |
| Conread position: | 372-797 |
| Cow position: | chr28:25041296-25040868 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 283 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 23, 45 |
| Conread position: | 379-800 |
| Cow position: | chr28:30534921-30534486 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 286 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 115, 34 |
| Conread position: | 387-790 |
| Cow position: | chr28:32588881-32588463 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 282 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 8, 27 |
| Conread position: | 470-795 |
| Cow position: | chr28:34409434-34409100 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 226 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 30, 24 |
| Conread position: | 497-800 |
| Cow position: | chr28:7743409-7743717 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 53, 33 |
| Conread position: | 510-784 |
| Cow position: | chr28:10598959-10599238 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 45, 20 |
Show alignments to all cow chromosomes.