Cow genome map

Conread name: Ss1.1-Thy1-THY010064A03.5

Conread position: 4-781
Cow position: chr8:9669189-9669967 (view UCSC Genome Browser custom track)
Alignm length: 812
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 58

Conread position: 40-800
Cow position: chr8:12541893-12541144 (view UCSC Genome Browser custom track)
Alignm length: 788
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 11

Conread position: 46-474
Cow position: chr8:38194464-38194860 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 297
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 65, 75

Conread position: 46-507
Cow position: chr8:18245714-18245279 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 313
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 123, 26

Conread position: 51-510
Cow position: chr8:25524434-25524857 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 68

Conread position: 53-453
Cow position: chr8:12313359-12312979 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 341, 68

Conread position: 53-784
Cow position: chr8:4306230-4306953 (view UCSC Genome Browser custom track)
Alignm length: 754
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 303, 49

Conread position: 53-784
Cow position: chr8:6063436-6062705 (view UCSC Genome Browser custom track)
Alignm length: 757
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 68

Conread position: 54-197
Cow position: chr8:34349716-34349854 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 54-213
Cow position: chr8:60920849-60921003 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 66, 0

Conread position: 54-246
Cow position: chr8:51067952-51067766 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 143
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 66, 0

Conread position: 54-312
Cow position: chr8:34109922-34110163 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 180
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 51, 0

Conread position: 54-322
Cow position: chr8:33326096-33326346 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 191
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 66, 0

Conread position: 54-334
Cow position: chr8:49218787-49219049 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 200
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 65, 0

Conread position: 54-375
Cow position: chr8:8516553-8516246 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 222
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 66, 7

Conread position: 54-375
Cow position: chr8:39820497-39820800 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 0

Conread position: 54-392
Cow position: chr8:16268589-16268266 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 234
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 289, 72

Conread position: 54-410
Cow position: chr8:3786675-3787004 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 252
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 318, 62

Conread position: 54-413
Cow position: chr8:29584269-29584612 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 66

Conread position: 54-416
Cow position: chr8:32436031-32435685 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 66

Conread position: 54-443
Cow position: chr8:47076209-47076582 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 68

Conread position: 54-454
Cow position: chr8:3748156-3747784 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 59

Conread position: 54-472
Cow position: chr8:60062454-60062851 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 64

Conread position: 54-476
Cow position: chr8:21156746-21156341 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 67

Conread position: 54-580
Cow position: chr8:30495549-30495017 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 363
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 127, 68

Conread position: 54-616
Cow position: chr8:1347205-1346655 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 66

Conread position: 54-616
Cow position: chr8:45357518-45356958 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 76

Conread position: 54-670
Cow position: chr8:47067775-47067148 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 66

Conread position: 54-686
Cow position: chr8:50995832-50996453 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 65

Conread position: 54-689
Cow position: chr8:10741601-10740970 (view UCSC Genome Browser custom track)
Alignm length: 658
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 319, 61

Conread position: 54-706
Cow position: chr8:45158481-45157854 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 326, 68

Conread position: 54-713
Cow position: chr8:16090878-16091538 (view UCSC Genome Browser custom track)
Alignm length: 683
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 43

Conread position: 54-726
Cow position: chr8:47887889-47888558 (view UCSC Genome Browser custom track)
Alignm length: 700
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 68

Conread position: 54-730
Cow position: chr8:25774602-25773927 (view UCSC Genome Browser custom track)
Alignm length: 702
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 326, 65

Conread position: 54-744
Cow position: chr8:18054773-18055449 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 324, 56

Conread position: 54-749
Cow position: chr8:29923306-29922621 (view UCSC Genome Browser custom track)
Alignm length: 716
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 174

Conread position: 54-764
Cow position: chr8:1321062-1321763 (view UCSC Genome Browser custom track)
Alignm length: 734
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 66

Conread position: 54-764
Cow position: chr8:2168474-2167772 (view UCSC Genome Browser custom track)
Alignm length: 731
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 56

Conread position: 54-764
Cow position: chr8:11834571-11835278 (view UCSC Genome Browser custom track)
Alignm length: 736
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 73

Conread position: 54-781
Cow position: chr8:42485953-42486670 (view UCSC Genome Browser custom track)
Alignm length: 749
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 340, 65

Conread position: 54-782
Cow position: chr8:59260903-59260179 (view UCSC Genome Browser custom track)
Alignm length: 754
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 32

Conread position: 54-784
Cow position: chr8:44000-43277 (view UCSC Genome Browser custom track)
Alignm length: 753
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 66

Conread position: 54-784
Cow position: chr8:1152230-1151518 (view UCSC Genome Browser custom track)
Alignm length: 749
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 38

Conread position: 54-784
Cow position: chr8:1581492-1582222 (view UCSC Genome Browser custom track)
Alignm length: 757
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 68

Conread position: 54-784
Cow position: chr8:5019055-5019778 (view UCSC Genome Browser custom track)
Alignm length: 759
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 65

Conread position: 54-784
Cow position: chr8:6464915-6465643 (view UCSC Genome Browser custom track)
Alignm length: 754
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 68

Conread position: 54-784
Cow position: chr8:10750392-10751109 (view UCSC Genome Browser custom track)
Alignm length: 751
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 66

Conread position: 54-784
Cow position: chr8:14926840-14926122 (view UCSC Genome Browser custom track)
Alignm length: 751
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 56

Conread position: 54-784
Cow position: chr8:22570259-22569532 (view UCSC Genome Browser custom track)
Alignm length: 755
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 66

Conread position: 54-784
Cow position: chr8:30156144-30156869 (view UCSC Genome Browser custom track)
Alignm length: 755
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 66

Conread position: 54-784
Cow position: chr8:32629988-32629246 (view UCSC Genome Browser custom track)
Alignm length: 764
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 66

Conread position: 54-784
Cow position: chr8:35471347-35472062 (view UCSC Genome Browser custom track)
Alignm length: 746
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 65

Conread position: 54-784
Cow position: chr8:47674881-47675605 (view UCSC Genome Browser custom track)
Alignm length: 750
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 321, 68

Conread position: 54-784
Cow position: chr8:53836987-53837706 (view UCSC Genome Browser custom track)
Alignm length: 750
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 65

Conread position: 54-784
Cow position: chr8:55272488-55271761 (view UCSC Genome Browser custom track)
Alignm length: 759
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 66

Conread position: 54-790
Cow position: chr8:14257125-14257859 (view UCSC Genome Browser custom track)
Alignm length: 761
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 66

Conread position: 54-790
Cow position: chr8:21251271-21252013 (view UCSC Genome Browser custom track)
Alignm length: 762
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 174

Conread position: 54-790
Cow position: chr8:50432109-50431371 (view UCSC Genome Browser custom track)
Alignm length: 763
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 66

Conread position: 54-800
Cow position: chr8:3854979-3854250 (view UCSC Genome Browser custom track)
Alignm length: 769
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 323, 65

Conread position: 54-800
Cow position: chr8:4688446-4689182 (view UCSC Genome Browser custom track)
Alignm length: 766
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 67

Conread position: 54-800
Cow position: chr8:8912769-8913505 (view UCSC Genome Browser custom track)
Alignm length: 769
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 73

Conread position: 54-800
Cow position: chr8:11803856-11804588 (view UCSC Genome Browser custom track)
Alignm length: 759
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 332, 62

Conread position: 54-800
Cow position: chr8:12451086-12451835 (view UCSC Genome Browser custom track)
Alignm length: 775
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 65

Conread position: 54-800
Cow position: chr8:19332616-19333356 (view UCSC Genome Browser custom track)
Alignm length: 768
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 65

Conread position: 54-800
Cow position: chr8:23772678-23773417 (view UCSC Genome Browser custom track)
Alignm length: 774
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 30

Conread position: 54-800
Cow position: chr8:36634459-36633732 (view UCSC Genome Browser custom track)
Alignm length: 763
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 431, 65

Conread position: 54-800
Cow position: chr8:36786762-36786012 (view UCSC Genome Browser custom track)
Alignm length: 773
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 72

Conread position: 54-800
Cow position: chr8:39193879-39193135 (view UCSC Genome Browser custom track)
Alignm length: 777
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 65

Conread position: 54-800
Cow position: chr8:41949272-41949996 (view UCSC Genome Browser custom track)
Alignm length: 762
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 331, 64

Conread position: 54-800
Cow position: chr8:44241646-44240910 (view UCSC Genome Browser custom track)
Alignm length: 764
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 323, 64

Conread position: 54-800
Cow position: chr8:45793711-45792967 (view UCSC Genome Browser custom track)
Alignm length: 774
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 65

Conread position: 54-800
Cow position: chr8:47660276-47659538 (view UCSC Genome Browser custom track)
Alignm length: 770
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 65

Conread position: 54-800
Cow position: chr8:50929060-50928323 (view UCSC Genome Browser custom track)
Alignm length: 766
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 326, 65

Conread position: 54-804
Cow position: chr8:14589832-14589085 (view UCSC Genome Browser custom track)
Alignm length: 773
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 65

Conread position: 55-671
Cow position: chr8:30486367-30485758 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 328, 54

Conread position: 55-796
Cow position: chr8:46059927-46059181 (view UCSC Genome Browser custom track)
Alignm length: 760
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 68

Conread position: 55-800
Cow position: chr8:11763996-11764737 (view UCSC Genome Browser custom track)
Alignm length: 774
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 68

Conread position: 56-781
Cow position: chr8:42746761-42746026 (view UCSC Genome Browser custom track)
Alignm length: 762
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 66

Conread position: 59-510
Cow position: chr8:45144313-45143878 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 63

Conread position: 59-659
Cow position: chr8:18291941-18291361 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 395
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 314, 36

Conread position: 59-746
Cow position: chr8:75564-74904 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 455
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 318, 52

Conread position: 59-752
Cow position: chr8:41643636-41642949 (view UCSC Genome Browser custom track)
Alignm length: 721
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 63

Conread position: 59-800
Cow position: chr8:42655948-42655216 (view UCSC Genome Browser custom track)
Alignm length: 761
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 312, 60

Conread position: 61-210
Cow position: chr8:1569255-1569112 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 61-411
Cow position: chr8:46217708-46217376 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 245
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 50, 64

Conread position: 61-452
Cow position: chr8:51525965-51526334 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 256
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 56, 62

Conread position: 61-455
Cow position: chr8:9538665-9538283 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 268
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 163, 35

Conread position: 61-508
Cow position: chr8:17880424-17880004 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 294
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 241, 12

Conread position: 61-510
Cow position: chr8:18685101-18684684 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 311
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 190, 56

Conread position: 61-580
Cow position: chr8:32300923-32301422 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 126

Conread position: 61-595
Cow position: chr8:47478573-47478066 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 354
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 286, 35

Conread position: 61-610
Cow position: chr8:21205591-21206124 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 309, 54

Conread position: 61-752
Cow position: chr8:12804817-12805511 (view UCSC Genome Browser custom track)
Alignm length: 718
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 315, 19

Conread position: 61-752
Cow position: chr8:25412670-25413355 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 311, 58

Conread position: 61-764
Cow position: chr8:24870429-24869752 (view UCSC Genome Browser custom track)
Alignm length: 720
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 30

Conread position: 61-781
Cow position: chr8:24191018-24191738 (view UCSC Genome Browser custom track)
Alignm length: 749
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 60

Conread position: 61-784
Cow position: chr8:46801854-46801145 (view UCSC Genome Browser custom track)
Alignm length: 752
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 61

Conread position: 61-800
Cow position: chr8:17313085-17313819 (view UCSC Genome Browser custom track)
Alignm length: 759
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 311, 58

Conread position: 61-800
Cow position: chr8:32317502-32316802 (view UCSC Genome Browser custom track)
Alignm length: 755
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 49

Conread position: 61-801
Cow position: chr8:33590431-33591146 (view UCSC Genome Browser custom track)
Alignm length: 754
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 311, 55

Conread position: 61-804
Cow position: chr8:49414127-49414855 (view UCSC Genome Browser custom track)
Alignm length: 765
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 312, 59

Conread position: 62-784
Cow position: chr8:9639942-9640662 (view UCSC Genome Browser custom track)
Alignm length: 752
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 321, 46

Conread position: 62-800
Cow position: chr8:8400049-8399335 (view UCSC Genome Browser custom track)
Alignm length: 757
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 45

Conread position: 62-804
Cow position: chr8:24914268-24913500 (view UCSC Genome Browser custom track)
Alignm length: 792
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 187

Conread position: 63-726
Cow position: chr8:3226838-3226181 (view UCSC Genome Browser custom track)
Alignm length: 692
Alignm identity: 440
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 87, 53

Conread position: 65-237
Cow position: chr8:25378031-25378210 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 55, 169

Conread position: 65-800
Cow position: chr8:38392680-38393415 (view UCSC Genome Browser custom track)
Alignm length: 760
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 306, 54

Conread position: 67-401
Cow position: chr8:19190750-19191071 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 236
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 181, 43

Conread position: 67-784
Cow position: chr8:42319214-42318504 (view UCSC Genome Browser custom track)
Alignm length: 740
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 53

Conread position: 68-670
Cow position: chr8:30442423-30441836 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 398
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 413, 68

Conread position: 68-753
Cow position: chr8:42469729-42470413 (view UCSC Genome Browser custom track)
Alignm length: 716
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 10

Conread position: 68-765
Cow position: chr8:40891237-40890562 (view UCSC Genome Browser custom track)
Alignm length: 715
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 48

Conread position: 71-411
Cow position: chr8:2887804-2888144 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 247
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 40, 169

Conread position: 72-453
Cow position: chr8:24228343-24228701 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 38

Conread position: 72-672
Cow position: chr8:34405437-34406014 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 35

Conread position: 72-787
Cow position: chr8:55086606-55087304 (view UCSC Genome Browser custom track)
Alignm length: 732
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 298, 47

Conread position: 88-800
Cow position: chr8:45689712-45689051 (view UCSC Genome Browser custom track)
Alignm length: 719
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 5

Conread position: 91-801
Cow position: chr8:32648784-32649485 (view UCSC Genome Browser custom track)
Alignm length: 728
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 123

Conread position: 92-800
Cow position: chr8:27155071-27154349 (view UCSC Genome Browser custom track)
Alignm length: 750
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 137

Conread position: 93-510
Cow position: chr8:29032898-29032506 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 29

Conread position: 106-804
Cow position: chr8:9737622-9738318 (view UCSC Genome Browser custom track)
Alignm length: 720
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 121

Conread position: 116-753
Cow position: chr8:29008701-29009341 (view UCSC Genome Browser custom track)
Alignm length: 665
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 116

Conread position: 118-510
Cow position: chr8:33691079-33691452 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 275
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 24, 40

Conread position: 123-689
Cow position: chr8:11148148-11147598 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 26

Conread position: 123-784
Cow position: chr8:7163458-7164119 (view UCSC Genome Browser custom track)
Alignm length: 691
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 59

Conread position: 124-508
Cow position: chr8:37655421-37655052 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 102

Conread position: 126-785
Cow position: chr8:51316802-51317454 (view UCSC Genome Browser custom track)
Alignm length: 683
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 30

Conread position: 131-492
Cow position: chr8:7399018-7398677 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 245
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 247, 10

Conread position: 131-628
Cow position: chr8:39358153-39358645 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 322
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 241, 39

Conread position: 131-800
Cow position: chr8:51700434-51701108 (view UCSC Genome Browser custom track)
Alignm length: 700
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 49

Conread position: 132-510
Cow position: chr8:46947963-46947588 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 269
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 240, 94

Conread position: 132-785
Cow position: chr8:61100165-61099511 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 99

Conread position: 133-443
Cow position: chr8:42157925-42157624 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 219
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 11, 95

Conread position: 133-484
Cow position: chr8:47360851-47360519 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 240
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 244, 73

Conread position: 136-411
Cow position: chr8:53383050-53382787 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 196
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 236, 90

Conread position: 136-704
Cow position: chr8:46651960-46652525 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 89

Conread position: 136-710
Cow position: chr8:22500377-22500945 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 392
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 236, 90

Conread position: 137-510
Cow position: chr8:42439832-42439477 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 265
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 57, 94

Conread position: 137-589
Cow position: chr8:44701210-44701654 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 89

Conread position: 150-717
Cow position: chr8:26605800-26606353 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 57

Conread position: 151-476
Cow position: chr8:42588603-42588912 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 75

Conread position: 151-784
Cow position: chr8:38603880-38603260 (view UCSC Genome Browser custom track)
Alignm length: 653
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 75

Conread position: 152-764
Cow position: chr8:3955185-3955791 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 74

Conread position: 154-800
Cow position: chr8:47490066-47489431 (view UCSC Genome Browser custom track)
Alignm length: 658
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 71

Conread position: 161-467
Cow position: chr8:24888200-24888483 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 213
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 134, 53

Conread position: 175-654
Cow position: chr8:34525104-34524610 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 327
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 54, 17

Conread position: 196-784
Cow position: chr8:58184454-58183871 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 381
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 11, 17

Conread position: 248-492
Cow position: chr8:37502797-37503037 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 176
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 131, 70

Conread position: 248-667
Cow position: chr8:38575985-38575539 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 294
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 108, 81

Conread position: 248-751
Cow position: chr8:47782622-47782109 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 352
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 147, 21

Conread position: 249-411
Cow position: chr8:49855905-49855742 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 123, 49

Conread position: 249-506
Cow position: chr8:11565961-11566199 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 181
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 142, 14

Conread position: 249-645
Cow position: chr8:38088133-38088543 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 279
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 128, 162

Conread position: 249-664
Cow position: chr8:8954599-8954172 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 61

Conread position: 249-693
Cow position: chr8:36310875-36310424 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 297
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 123, 49

Conread position: 249-717
Cow position: chr8:36810359-36810837 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 161

Conread position: 249-764
Cow position: chr8:12447187-12446662 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 161

Conread position: 249-780
Cow position: chr8:55083956-55084510 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 357
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 48, 174

Conread position: 249-783
Cow position: chr8:21042409-21041859 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 161

Conread position: 249-784
Cow position: chr8:17382896-17382348 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 161

Conread position: 249-784
Cow position: chr8:21092115-21091567 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 69

Conread position: 249-790
Cow position: chr8:1569329-1569893 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 528

Conread position: 249-796
Cow position: chr8:13372118-13372680 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 25

Conread position: 250-671
Cow position: chr8:49693600-49693169 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 288
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 234, 122

Conread position: 251-440
Cow position: chr8:8310391-8310581 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 147
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 120, 160

Conread position: 252-510
Cow position: chr8:50958781-50958524 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 182
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 25, 20

Conread position: 252-629
Cow position: chr8:26623618-26624000 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 155

Conread position: 252-717
Cow position: chr8:42154072-42153602 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 57

Conread position: 252-796
Cow position: chr8:5680936-5680386 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 66

Conread position: 253-475
Cow position: chr8:50286744-50286526 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 169
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 48, 156

Conread position: 253-478
Cow position: chr8:34440081-34440302 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 160
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 142, 124

Conread position: 260-784
Cow position: chr8:18483986-18484529 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 125

Conread position: 263-717
Cow position: chr8:43542320-43541852 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 147

Conread position: 263-752
Cow position: chr8:4296345-4296850 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 145

Conread position: 263-800
Cow position: chr8:2234521-2233959 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 299

Conread position: 278-804
Cow position: chr8:18578467-18577969 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 337
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 107, 30

Conread position: 288-528
Cow position: chr8:42429918-42430149 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 173
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 138, 105

Conread position: 291-784
Cow position: chr8:24874301-24873818 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 335
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 25, 17

Conread position: 297-784
Cow position: chr8:1502007-1501517 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 113

Conread position: 298-804
Cow position: chr8:15223076-15223596 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 112

Conread position: 299-800
Cow position: chr8:47468414-47467891 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 12

Conread position: 301-613
Cow position: chr8:50682327-50682644 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 222
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 68, 85

Conread position: 304-510
Cow position: chr8:53433493-53433698 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 160
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 75, 42

Conread position: 304-624
Cow position: chr8:6749746-6749421 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 239
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 38, 8

Conread position: 304-670
Cow position: chr8:2209202-2209572 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 243
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 91, 10

Conread position: 304-670
Cow position: chr8:2214351-2214721 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 243
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 91, 10

Conread position: 304-764
Cow position: chr8:16733073-16733535 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 314
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 70, 111

Conread position: 314-639
Cow position: chr8:51068348-51068678 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 236
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 60, 101

Conread position: 319-801
Cow position: chr8:49219226-49219726 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 335
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 53, 91

Conread position: 324-766
Cow position: chr8:12055733-12056191 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 310
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 54, 5

Conread position: 330-689
Cow position: chr8:9943407-9943046 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 255
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 53, 26

Conread position: 335-764
Cow position: chr8:3333331-3333777 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 304
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 45, 83

Conread position: 338-759
Cow position: chr8:11604532-11604974 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 301
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 41, 330

Conread position: 341-801
Cow position: chr8:4272580-4273054 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 319
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 45, 101

Conread position: 342-800
Cow position: chr8:44123411-44123880 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 316
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 36, 74

Conread position: 412-664
Cow position: chr8:54268128-54268392 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 185
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 75, 9

Conread position: 412-784
Cow position: chr8:1935306-1934922 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 264
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 21, 9

Conread position: 412-800
Cow position: chr8:8229010-8228614 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 264
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 81, 43

Conread position: 425-753
Cow position: chr8:19824496-19824168 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 226
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 199, 74

Conread position: 434-800
Cow position: chr8:27536455-27536082 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 233
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 116, 86

Conread position: 436-790
Cow position: chr8:29629213-29628840 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 244
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 58, 125

Conread position: 491-784
Cow position: chr8:46217146-46216836 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 209
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 11, 52

Conread position: 497-784
Cow position: chr8:49285591-49285296 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 200
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 53, 33

Conread position: 501-781
Cow position: chr8:5244924-5244647 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 197
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 172, 29

Conread position: 551-800
Cow position: chr8:36333788-36333532 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 172
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 80, 211

Show alignments to all cow chromosomes.