Cow genome map

Conread name: Ss1.1-Thy1-THY010064A03.5

Conread position: 1-799
Cow position: chrX:13055311-13056108 (view UCSC Genome Browser custom track)
Alignm length: 825
Alignm identity: 509
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 108, 62

Conread position: 41-629
Cow position: chrX:44365234-44365826 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 395
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 15, 77

Conread position: 46-470
Cow position: chrX:34219876-34220286 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 167

Conread position: 51-800
Cow position: chrX:5356220-5355477 (view UCSC Genome Browser custom track)
Alignm length: 775
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 321, 11

Conread position: 52-254
Cow position: chrX:20169697-20169899 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 141
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 87, 175

Conread position: 52-787
Cow position: chrX:19397370-19398105 (view UCSC Genome Browser custom track)
Alignm length: 760
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 70

Conread position: 52-790
Cow position: chrX:34007385-34008117 (view UCSC Genome Browser custom track)
Alignm length: 765
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 321, 65

Conread position: 53-492
Cow position: chrX:18245448-18245856 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 342, 68

Conread position: 53-580
Cow position: chrX:35026610-35027105 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 357
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 319, 49

Conread position: 53-781
Cow position: chrX:29909821-29909102 (view UCSC Genome Browser custom track)
Alignm length: 749
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 321, 67

Conread position: 53-796
Cow position: chrX:4412460-4413196 (view UCSC Genome Browser custom track)
Alignm length: 761
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 341, 69

Conread position: 54-200
Cow position: chrX:26765593-26765451 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 68, 0

Conread position: 54-201
Cow position: chrX:18952072-18951930 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 65, 0

Conread position: 54-224
Cow position: chrX:26757027-26756865 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 54-237
Cow position: chrX:14461110-14461287 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 68, 0

Conread position: 54-244
Cow position: chrX:27986225-27986041 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 66, 0

Conread position: 54-274
Cow position: chrX:21507563-21507348 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 159
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 206, 68

Conread position: 54-331
Cow position: chrX:27124009-27124268 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 193
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 66, 0

Conread position: 54-369
Cow position: chrX:12463380-12463692 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 221
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 65, 136

Conread position: 54-389
Cow position: chrX:23454414-23454096 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 65

Conread position: 54-389
Cow position: chrX:30436449-30436767 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 68

Conread position: 54-392
Cow position: chrX:27316883-27317197 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 240
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 318, 34

Conread position: 54-406
Cow position: chrX:13411525-13411192 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 247
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 318, 67

Conread position: 54-411
Cow position: chrX:20695219-20694878 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 251
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 318, 73

Conread position: 54-444
Cow position: chrX:22127528-22127157 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 68

Conread position: 54-453
Cow position: chrX:21752837-21752455 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 83

Conread position: 54-462
Cow position: chrX:23216432-23216820 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 65

Conread position: 54-465
Cow position: chrX:27592384-27591994 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 322, 66

Conread position: 54-471
Cow position: chrX:20873450-20873052 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 273
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 243, 62

Conread position: 54-472
Cow position: chrX:29852113-29851722 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 65

Conread position: 54-482
Cow position: chrX:45418643-45418217 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 289
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 323, 82

Conread position: 54-498
Cow position: chrX:11463442-11463008 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 66

Conread position: 54-508
Cow position: chrX:16277254-16277685 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 62

Conread position: 54-508
Cow position: chrX:16684231-16683795 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 68

Conread position: 54-510
Cow position: chrX:5600905-5600459 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 62

Conread position: 54-609
Cow position: chrX:18536004-18536537 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 331, 62

Conread position: 54-621
Cow position: chrX:24323960-24323397 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 66

Conread position: 54-638
Cow position: chrX:21581091-21581662 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 340, 65

Conread position: 54-639
Cow position: chrX:7032058-7032637 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 66

Conread position: 54-659
Cow position: chrX:24807952-24807352 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 404
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 110, 25

Conread position: 54-670
Cow position: chrX:3467042-3466433 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 66

Conread position: 54-670
Cow position: chrX:21792219-21792832 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 66

Conread position: 54-672
Cow position: chrX:10414531-10413935 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 63

Conread position: 54-704
Cow position: chrX:3374304-3373674 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 341, 68

Conread position: 54-704
Cow position: chrX:26398521-26397874 (view UCSC Genome Browser custom track)
Alignm length: 673
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 66

Conread position: 54-712
Cow position: chrX:14783872-14783225 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 24

Conread position: 54-717
Cow position: chrX:673602-672945 (view UCSC Genome Browser custom track)
Alignm length: 683
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 68

Conread position: 54-718
Cow position: chrX:28505664-28505002 (view UCSC Genome Browser custom track)
Alignm length: 686
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 68

Conread position: 54-725
Cow position: chrX:31511227-31511877 (view UCSC Genome Browser custom track)
Alignm length: 696
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 37

Conread position: 54-730
Cow position: chrX:15177831-15177165 (view UCSC Genome Browser custom track)
Alignm length: 694
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 68

Conread position: 54-730
Cow position: chrX:28560284-28559601 (view UCSC Genome Browser custom track)
Alignm length: 703
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 68

Conread position: 54-734
Cow position: chrX:8589785-8590465 (view UCSC Genome Browser custom track)
Alignm length: 695
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 341, 72

Conread position: 54-738
Cow position: chrX:15622899-15622211 (view UCSC Genome Browser custom track)
Alignm length: 714
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 175

Conread position: 54-751
Cow position: chrX:30168474-30167781 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 66

Conread position: 54-756
Cow position: chrX:21342007-21342703 (view UCSC Genome Browser custom track)
Alignm length: 721
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 149

Conread position: 54-763
Cow position: chrX:43073363-43074051 (view UCSC Genome Browser custom track)
Alignm length: 729
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 53

Conread position: 54-764
Cow position: chrX:17476815-17476100 (view UCSC Genome Browser custom track)
Alignm length: 740
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 66

Conread position: 54-764
Cow position: chrX:29095721-29095009 (view UCSC Genome Browser custom track)
Alignm length: 737
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 66

Conread position: 54-764
Cow position: chrX:31200161-31200865 (view UCSC Genome Browser custom track)
Alignm length: 734
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 324, 62

Conread position: 54-764
Cow position: chrX:37813751-37814456 (view UCSC Genome Browser custom track)
Alignm length: 735
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 66

Conread position: 54-764
Cow position: chrX:39696387-39697076 (view UCSC Genome Browser custom track)
Alignm length: 731
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 56

Conread position: 54-778
Cow position: chrX:27979214-27978497 (view UCSC Genome Browser custom track)
Alignm length: 747
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 65

Conread position: 54-781
Cow position: chrX:15262018-15261294 (view UCSC Genome Browser custom track)
Alignm length: 750
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 174

Conread position: 54-782
Cow position: chrX:30182322-30181601 (view UCSC Genome Browser custom track)
Alignm length: 752
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 65

Conread position: 54-784
Cow position: chrX:2578027-2578752 (view UCSC Genome Browser custom track)
Alignm length: 756
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 68

Conread position: 54-784
Cow position: chrX:3083532-3082807 (view UCSC Genome Browser custom track)
Alignm length: 757
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 68

Conread position: 54-784
Cow position: chrX:3419614-3418892 (view UCSC Genome Browser custom track)
Alignm length: 756
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 56

Conread position: 54-784
Cow position: chrX:5322123-5321386 (view UCSC Genome Browser custom track)
Alignm length: 758
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 301, 66

Conread position: 54-784
Cow position: chrX:7095073-7095825 (view UCSC Genome Browser custom track)
Alignm length: 766
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 66

Conread position: 54-784
Cow position: chrX:8481052-8481777 (view UCSC Genome Browser custom track)
Alignm length: 754
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 66

Conread position: 54-784
Cow position: chrX:9009941-9010659 (view UCSC Genome Browser custom track)
Alignm length: 748
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 66

Conread position: 54-784
Cow position: chrX:9126686-9127411 (view UCSC Genome Browser custom track)
Alignm length: 757
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 66

Conread position: 54-784
Cow position: chrX:11147728-11147013 (view UCSC Genome Browser custom track)
Alignm length: 753
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 66

Conread position: 54-784
Cow position: chrX:12344546-12345264 (view UCSC Genome Browser custom track)
Alignm length: 757
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 57

Conread position: 54-784
Cow position: chrX:14596449-14597182 (view UCSC Genome Browser custom track)
Alignm length: 758
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 66

Conread position: 54-784
Cow position: chrX:16361515-16360781 (view UCSC Genome Browser custom track)
Alignm length: 758
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 66

Conread position: 54-784
Cow position: chrX:16780887-16781611 (view UCSC Genome Browser custom track)
Alignm length: 756
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 68

Conread position: 54-784
Cow position: chrX:20724571-20725299 (view UCSC Genome Browser custom track)
Alignm length: 758
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 319, 65

Conread position: 54-784
Cow position: chrX:22566090-22565359 (view UCSC Genome Browser custom track)
Alignm length: 759
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 66

Conread position: 54-784
Cow position: chrX:23020900-23021645 (view UCSC Genome Browser custom track)
Alignm length: 765
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 61

Conread position: 54-784
Cow position: chrX:23278628-23279353 (view UCSC Genome Browser custom track)
Alignm length: 752
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 65

Conread position: 54-784
Cow position: chrX:24771257-24770529 (view UCSC Genome Browser custom track)
Alignm length: 753
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 66

Conread position: 54-784
Cow position: chrX:27424717-27423957 (view UCSC Genome Browser custom track)
Alignm length: 770
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 66

Conread position: 54-784
Cow position: chrX:28586586-28587307 (view UCSC Genome Browser custom track)
Alignm length: 754
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 66

Conread position: 54-784
Cow position: chrX:29098038-29098753 (view UCSC Genome Browser custom track)
Alignm length: 753
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 65

Conread position: 54-784
Cow position: chrX:32065564-32064836 (view UCSC Genome Browser custom track)
Alignm length: 756
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 66

Conread position: 54-784
Cow position: chrX:35531460-35532185 (view UCSC Genome Browser custom track)
Alignm length: 754
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 73

Conread position: 54-786
Cow position: chrX:29949008-29948290 (view UCSC Genome Browser custom track)
Alignm length: 750
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 56

Conread position: 54-787
Cow position: chrX:4743409-4742714 (view UCSC Genome Browser custom track)
Alignm length: 744
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 68

Conread position: 54-790
Cow position: chrX:12652900-12652159 (view UCSC Genome Browser custom track)
Alignm length: 762
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 66

Conread position: 54-790
Cow position: chrX:30012604-30013327 (view UCSC Genome Browser custom track)
Alignm length: 755
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 130

Conread position: 54-790
Cow position: chrX:34094229-34093495 (view UCSC Genome Browser custom track)
Alignm length: 762
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 68

Conread position: 54-800
Cow position: chrX:2144574-2145315 (view UCSC Genome Browser custom track)
Alignm length: 775
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 327, 68

Conread position: 54-800
Cow position: chrX:2481028-2480286 (view UCSC Genome Browser custom track)
Alignm length: 770
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 65

Conread position: 54-800
Cow position: chrX:5295947-5295209 (view UCSC Genome Browser custom track)
Alignm length: 767
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 341, 62

Conread position: 54-800
Cow position: chrX:9094248-9094988 (view UCSC Genome Browser custom track)
Alignm length: 767
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 65

Conread position: 54-800
Cow position: chrX:10530185-10529445 (view UCSC Genome Browser custom track)
Alignm length: 763
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 71

Conread position: 54-800
Cow position: chrX:15123544-15122820 (view UCSC Genome Browser custom track)
Alignm length: 765
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 57

Conread position: 54-800
Cow position: chrX:21225076-21225822 (view UCSC Genome Browser custom track)
Alignm length: 776
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 326, 65

Conread position: 54-800
Cow position: chrX:21590907-21591631 (view UCSC Genome Browser custom track)
Alignm length: 768
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 362, 54

Conread position: 54-800
Cow position: chrX:24445463-24444726 (view UCSC Genome Browser custom track)
Alignm length: 765
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 326, 65

Conread position: 54-800
Cow position: chrX:30230506-30229770 (view UCSC Genome Browser custom track)
Alignm length: 768
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 65

Conread position: 54-800
Cow position: chrX:36838316-36839063 (view UCSC Genome Browser custom track)
Alignm length: 776
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 63

Conread position: 54-801
Cow position: chrX:1548581-1549324 (view UCSC Genome Browser custom track)
Alignm length: 771
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 319, 65

Conread position: 54-801
Cow position: chrX:13930128-13929387 (view UCSC Genome Browser custom track)
Alignm length: 775
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 53

Conread position: 54-804
Cow position: chrX:18221023-18221765 (view UCSC Genome Browser custom track)
Alignm length: 771
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 64

Conread position: 54-804
Cow position: chrX:18658203-18657455 (view UCSC Genome Browser custom track)
Alignm length: 776
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 66

Conread position: 55-207
Cow position: chrX:29886593-29886744 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 16, 68

Conread position: 55-375
Cow position: chrX:10385859-10386156 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 217
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 29, 0

Conread position: 55-446
Cow position: chrX:26529638-26530004 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 65

Conread position: 55-784
Cow position: chrX:5282180-5281453 (view UCSC Genome Browser custom track)
Alignm length: 754
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 66

Conread position: 55-800
Cow position: chrX:21491765-21492511 (view UCSC Genome Browser custom track)
Alignm length: 774
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 83

Conread position: 56-410
Cow position: chrX:4752004-4751671 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 247
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 316, 11

Conread position: 59-414
Cow position: chrX:34836501-34836172 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 241
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 165, 48

Conread position: 59-510
Cow position: chrX:23384928-23384498 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 299
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 229, 62

Conread position: 59-717
Cow position: chrX:41849614-41848957 (view UCSC Genome Browser custom track)
Alignm length: 688
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 63

Conread position: 60-752
Cow position: chrX:31502150-31502830 (view UCSC Genome Browser custom track)
Alignm length: 717
Alignm identity: 438
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 62, 136

Conread position: 61-199
Cow position: chrX:20332948-20332815 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 61-211
Cow position: chrX:32327770-32327917 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 61-246
Cow position: chrX:23388924-23388745 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 57, 0

Conread position: 61-411
Cow position: chrX:322076-322409 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 49

Conread position: 61-411
Cow position: chrX:22489768-22490107 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 245
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 311, 17

Conread position: 61-443
Cow position: chrX:38123343-38123703 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 298, 58

Conread position: 61-444
Cow position: chrX:28757032-28756655 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 166

Conread position: 61-492
Cow position: chrX:2857765-2857356 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 59

Conread position: 61-508
Cow position: chrX:2561244-2560822 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 61

Conread position: 61-510
Cow position: chrX:19876126-19876541 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 311
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 311, 41

Conread position: 61-623
Cow position: chrX:36072129-36071601 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 373
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 312, 41

Conread position: 61-647
Cow position: chrX:21731166-21730608 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 374
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 311, 49

Conread position: 61-718
Cow position: chrX:28520993-28520341 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 131

Conread position: 61-764
Cow position: chrX:6871463-6870774 (view UCSC Genome Browser custom track)
Alignm length: 732
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 44

Conread position: 61-764
Cow position: chrX:17053163-17053866 (view UCSC Genome Browser custom track)
Alignm length: 727
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 59

Conread position: 61-764
Cow position: chrX:30058787-30059487 (view UCSC Genome Browser custom track)
Alignm length: 721
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 27

Conread position: 61-777
Cow position: chrX:13081163-13080433 (view UCSC Genome Browser custom track)
Alignm length: 756
Alignm identity: 468
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 233, 57

Conread position: 61-777
Cow position: chrX:26433023-26433698 (view UCSC Genome Browser custom track)
Alignm length: 729
Alignm identity: 468
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 313, 59

Conread position: 61-781
Cow position: chrX:6281171-6280470 (view UCSC Genome Browser custom track)
Alignm length: 737
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 41

Conread position: 61-784
Cow position: chrX:2814871-2814151 (view UCSC Genome Browser custom track)
Alignm length: 749
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 59

Conread position: 61-784
Cow position: chrX:16810279-16809558 (view UCSC Genome Browser custom track)
Alignm length: 748
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 59

Conread position: 61-784
Cow position: chrX:37850752-37851471 (view UCSC Genome Browser custom track)
Alignm length: 751
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 59

Conread position: 61-784
Cow position: chrX:38149203-38149925 (view UCSC Genome Browser custom track)
Alignm length: 752
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 311, 58

Conread position: 61-784
Cow position: chrX:39562340-39561606 (view UCSC Genome Browser custom track)
Alignm length: 751
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 59

Conread position: 61-790
Cow position: chrX:15979347-15978620 (view UCSC Genome Browser custom track)
Alignm length: 751
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 169

Conread position: 61-790
Cow position: chrX:20034789-20034074 (view UCSC Genome Browser custom track)
Alignm length: 750
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 59

Conread position: 61-792
Cow position: chrX:1941754-1941024 (view UCSC Genome Browser custom track)
Alignm length: 753
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 59

Conread position: 61-800
Cow position: chrX:17666186-17665454 (view UCSC Genome Browser custom track)
Alignm length: 766
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 321, 46

Conread position: 62-482
Cow position: chrX:12184553-12184954 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 312, 75

Conread position: 62-623
Cow position: chrX:9066314-9066843 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 379
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 384, 19

Conread position: 62-713
Cow position: chrX:13180934-13180299 (view UCSC Genome Browser custom track)
Alignm length: 671
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 333, 34

Conread position: 63-529
Cow position: chrX:27644683-27645138 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 312
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 312, 23

Conread position: 63-764
Cow position: chrX:24446615-24445902 (view UCSC Genome Browser custom track)
Alignm length: 735
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 311, 58

Conread position: 63-784
Cow position: chrX:7753513-7754232 (view UCSC Genome Browser custom track)
Alignm length: 747
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 311, 57

Conread position: 63-800
Cow position: chrX:15040942-15040201 (view UCSC Genome Browser custom track)
Alignm length: 767
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 164

Conread position: 64-617
Cow position: chrX:47384698-47384192 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 362
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 9, 50

Conread position: 65-484
Cow position: chrX:30068228-30067839 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 288
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 321, 52

Conread position: 65-492
Cow position: chrX:1829242-1828844 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 291
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 309, 24

Conread position: 65-510
Cow position: chrX:33715080-33714658 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 297
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 307, 37

Conread position: 65-693
Cow position: chrX:2011002-2010387 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 124

Conread position: 65-780
Cow position: chrX:33536185-33536910 (view UCSC Genome Browser custom track)
Alignm length: 749
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 58

Conread position: 65-784
Cow position: chrX:22617589-22616855 (view UCSC Genome Browser custom track)
Alignm length: 752
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 163

Conread position: 66-804
Cow position: chrX:26443165-26443897 (view UCSC Genome Browser custom track)
Alignm length: 764
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 45

Conread position: 67-453
Cow position: chrX:15307372-15307020 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 257
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 306, 49

Conread position: 68-508
Cow position: chrX:23328187-23327780 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 299
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 288, 48

Conread position: 68-510
Cow position: chrX:30834136-30834571 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 310
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 306, 54

Conread position: 69-677
Cow position: chrX:35021889-35022469 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 67

Conread position: 72-644
Cow position: chrX:33698048-33697490 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 379
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 274, 44

Conread position: 72-784
Cow position: chrX:21831130-21831841 (view UCSC Genome Browser custom track)
Alignm length: 738
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 47

Conread position: 73-713
Cow position: chrX:28867619-28866989 (view UCSC Genome Browser custom track)
Alignm length: 660
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 299, 42

Conread position: 74-800
Cow position: chrX:22817683-22818418 (view UCSC Genome Browser custom track)
Alignm length: 764
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 126

Conread position: 81-742
Cow position: chrX:16463809-16464482 (view UCSC Genome Browser custom track)
Alignm length: 689
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 145

Conread position: 84-800
Cow position: chrX:2381133-2381844 (view UCSC Genome Browser custom track)
Alignm length: 747
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 35

Conread position: 84-800
Cow position: chrX:21268435-21267725 (view UCSC Genome Browser custom track)
Alignm length: 737
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 342, 38

Conread position: 85-784
Cow position: chrX:5678685-5678001 (view UCSC Genome Browser custom track)
Alignm length: 718
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 34

Conread position: 89-781
Cow position: chrX:21766258-21766955 (view UCSC Genome Browser custom track)
Alignm length: 720
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 31

Conread position: 94-779
Cow position: chrX:22809531-22810216 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 132

Conread position: 96-800
Cow position: chrX:6248522-6247837 (view UCSC Genome Browser custom track)
Alignm length: 724
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 14

Conread position: 103-784
Cow position: chrX:12358528-12359216 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 17

Conread position: 113-712
Cow position: chrX:11459158-11458548 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 23

Conread position: 123-706
Cow position: chrX:6237153-6236580 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 103

Conread position: 124-790
Cow position: chrX:5359675-5360341 (view UCSC Genome Browser custom track)
Alignm length: 689
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 102

Conread position: 128-623
Cow position: chrX:11817180-11816700 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 64

Conread position: 130-784
Cow position: chrX:8962154-8961496 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 77

Conread position: 130-784
Cow position: chrX:13072781-13072120 (view UCSC Genome Browser custom track)
Alignm length: 681
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 101

Conread position: 130-784
Cow position: chrX:13093342-13092680 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 101

Conread position: 136-697
Cow position: chrX:18290614-18290062 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 364
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 45, 24

Conread position: 136-716
Cow position: chrX:17611798-17611205 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 402
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 204, 48

Conread position: 142-769
Cow position: chrX:5650534-5649923 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 24

Conread position: 146-510
Cow position: chrX:28649864-28649498 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 264
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 249, 49

Conread position: 146-730
Cow position: chrX:20799001-20799571 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 75

Conread position: 148-447
Cow position: chrX:27496619-27496908 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 218
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 223, 101

Conread position: 149-784
Cow position: chrX:15144507-15143875 (view UCSC Genome Browser custom track)
Alignm length: 660
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 77

Conread position: 151-580
Cow position: chrX:15991729-15992149 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 302
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 221, 18

Conread position: 152-472
Cow position: chrX:16044978-16044665 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 232
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 243, 73

Conread position: 152-724
Cow position: chrX:28556089-28556645 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 381
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 220, 78

Conread position: 158-777
Cow position: chrX:30071597-30072205 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 67

Conread position: 160-687
Cow position: chrX:48809898-48810400 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 332
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 212, 60

Conread position: 198-784
Cow position: chrX:26756913-26756314 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 49

Conread position: 204-800
Cow position: chrX:16709699-16710308 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 8

Conread position: 205-717
Cow position: chrX:29940963-29941475 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 340
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 50, 7

Conread position: 221-528
Cow position: chrX:13914168-13914470 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 197
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 157, 175

Conread position: 229-510
Cow position: chrX:4766773-4766500 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 193
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 19, 78

Conread position: 230-639
Cow position: chrX:26765451-26765031 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 401

Conread position: 241-485
Cow position: chrX:45405032-45404773 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 187
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 100, 13

Conread position: 247-763
Cow position: chrX:21317260-21317771 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 163

Conread position: 247-764
Cow position: chrX:37819930-37820463 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 350
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 124, 156

Conread position: 248-461
Cow position: chrX:6371684-6371893 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 150
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 137, 89

Conread position: 248-667
Cow position: chrX:27984821-27984386 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 54

Conread position: 249-471
Cow position: chrX:504479-504261 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 164
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 107, 29

Conread position: 249-510
Cow position: chrX:24167476-24167212 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 177
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 106, 160

Conread position: 249-623
Cow position: chrX:5279554-5279182 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 249
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 125, 99

Conread position: 249-693
Cow position: chrX:9170595-9170140 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 166

Conread position: 249-750
Cow position: chrX:20364342-20363835 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 351
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 120, 104

Conread position: 249-762
Cow position: chrX:26769926-26769406 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 355
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 128, 18

Conread position: 249-767
Cow position: chrX:16022539-16023076 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 162

Conread position: 249-784
Cow position: chrX:2046871-2047418 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 161

Conread position: 249-784
Cow position: chrX:2273087-2273628 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 161

Conread position: 249-784
Cow position: chrX:19475376-19474822 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 161

Conread position: 249-784
Cow position: chrX:30138077-30137529 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 368
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 107, 112

Conread position: 249-800
Cow position: chrX:7553030-7552464 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 99

Conread position: 249-800
Cow position: chrX:16701457-16702026 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 163

Conread position: 254-508
Cow position: chrX:28550302-28550556 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 194
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 120, 156

Conread position: 254-764
Cow position: chrX:31980066-31979544 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 54

Conread position: 261-487
Cow position: chrX:16232738-16232514 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 158
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 111, 149

Conread position: 262-790
Cow position: chrX:29792273-29791747 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 356
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 133, 21

Conread position: 281-800
Cow position: chrX:18951904-18951389 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 61

Conread position: 283-510
Cow position: chrX:7811344-7811119 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 166
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 97, 109

Conread position: 288-492
Cow position: chrX:35385198-35385002 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 147
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 84, 39

Conread position: 292-717
Cow position: chrX:35283112-35283563 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 306
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 64, 68

Conread position: 298-799
Cow position: chrX:10868025-10867510 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 125

Conread position: 301-784
Cow position: chrX:8513123-8513609 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 322
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 6, 115

Conread position: 301-784
Cow position: chrX:31494561-31495062 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 302
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 73, 116

Conread position: 301-804
Cow position: chrX:5333601-5333082 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 109

Conread position: 304-751
Cow position: chrX:3359661-3360124 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 308
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 70, 95

Conread position: 306-632
Cow position: chrX:30169249-30168906 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 237
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 68, 272

Conread position: 307-784
Cow position: chrX:32328048-32328540 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 333
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 75, 89

Conread position: 308-784
Cow position: chrX:20732087-20732574 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 56

Conread position: 309-617
Cow position: chrX:13432500-13432187 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 224
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 63, 101

Conread position: 310-803
Cow position: chrX:23388709-23388202 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 336
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 62, 100

Conread position: 313-672
Cow position: chrX:28608239-28607883 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 257
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 113, 55

Conread position: 314-800
Cow position: chrX:35939194-35938678 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 109

Conread position: 342-790
Cow position: chrX:24411902-24412361 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 299
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 32, 74

Conread position: 358-800
Cow position: chrX:12463890-12464350 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 307
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 25, 59

Conread position: 381-784
Cow position: chrX:16805235-16804813 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 237
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 112, 392

Conread position: 406-790
Cow position: chrX:7119421-7119824 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 267
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 25, 15

Conread position: 412-784
Cow position: chrX:23454114-23453726 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 254
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 23, 136

Conread position: 412-804
Cow position: chrX:26623871-26623463 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 270
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 82, 129

Conread position: 413-800
Cow position: chrX:13407343-13406943 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 255
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 69, 148

Conread position: 420-790
Cow position: chrX:30436849-30437239 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 256
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 11, 122

Conread position: 421-790
Cow position: chrX:6579890-6580276 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 246
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 10, 118

Conread position: 425-784
Cow position: chrX:24730598-24730976 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 245
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 68, 106

Conread position: 436-800
Cow position: chrX:22126806-22126432 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 252
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 58, 105

Conread position: 532-784
Cow position: chrX:4906930-4906665 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 179
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 18, 90

Conread position: 534-800
Cow position: chrX:20651510-20651787 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 194
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 14, 232

Conread position: 550-804
Cow position: chrX:23573719-23573456 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 177
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 71, 194

Conread position: 554-800
Cow position: chrX:42008723-42008972 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 167
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 73, 63

Show alignments to all cow chromosomes.