Cow genome map


           Conread name:
           Ss1.1-Thy1-THY010064A05.5
        

               Conread position:
               234-425
               

               Cow position:
               chr9:48809160-48808962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               24, 130
               

               Conread position:
               254-436
               

               Cow position:
               chr9:5399452-5399269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               41, 36
               

               Conread position:
               264-428
               

               Cow position:
               chr9:34917196-34917365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               30, 63
               

               Conread position:
               267-424
               

               Cow position:
               chr9:48016966-48016807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               25, 60
               

               Conread position:
               318-417
               

               Cow position:
               chr9:34423542-34423443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               82
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               318-426
               

               Cow position:
               chr9:61019441-61019550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               89
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               319-428
               

               Cow position:
               chr9:52511038-52510927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               91
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               94, 0
               
Show alignments to all cow chromosomes.