Cow genome map
| Conread name: | Ss1.1-Thy1-THY010066E12.5 |
| Conread position: | 1-369 |
| Cow position: | chr13:36959423-36959064 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 243 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 127, 26 |
| Conread position: | 2-166 |
| Cow position: | chr13:22766153-22766318 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 2-183 |
| Cow position: | chr13:34029210-34029384 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 2-191 |
| Cow position: | chr13:29202231-29202039 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 28, 116 |
| Conread position: | 2-199 |
| Cow position: | chr13:21132065-21132269 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 2-219 |
| Cow position: | chr13:46731594-46731385 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 128, 6 |
| Conread position: | 2-222 |
| Cow position: | chr13:23043823-23043608 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 127, 39 |
| Conread position: | 2-241 |
| Cow position: | chr13:34206766-34206534 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 224, 25 |
| Conread position: | 2-282 |
| Cow position: | chr13:3057988-3057706 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 98 |
| Conread position: | 2-285 |
| Cow position: | chr13:11224088-11223813 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 197 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 51, 30 |
| Conread position: | 2-298 |
| Cow position: | chr13:22185111-22184819 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 63, 20 |
| Conread position: | 2-302 |
| Cow position: | chr13:4941210-4941512 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 2-309 |
| Cow position: | chr13:33336294-33335993 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 55 |
| Conread position: | 2-312 |
| Cow position: | chr13:27652737-27653036 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 122, 28 |
| Conread position: | 2-327 |
| Cow position: | chr13:15450984-15450660 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 123 |
| Conread position: | 2-335 |
| Cow position: | chr13:9044629-9044964 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 2-335 |
| Cow position: | chr13:27922101-27921776 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 51, 103 |
| Conread position: | 2-335 |
| Cow position: | chr13:31556587-31556268 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 227 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 178, 45 |
| Conread position: | 2-335 |
| Cow position: | chr13:49973806-49974141 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 2-340 |
| Cow position: | chr13:676985-677337 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 2-343 |
| Cow position: | chr13:2388696-2388348 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 285 |
| Conread position: | 2-343 |
| Cow position: | chr13:32985224-32984884 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 233 |
| Conread position: | 2-343 |
| Cow position: | chr13:34048752-34049093 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 237 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 68, 62 |
| Conread position: | 2-343 |
| Cow position: | chr13:60466459-60466795 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 11 |
| Conread position: | 2-357 |
| Cow position: | chr13:34868871-34869229 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 125 |
| Conread position: | 2-358 |
| Cow position: | chr13:21840076-21839715 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 2-358 |
| Cow position: | chr13:47229879-47229518 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 2-362 |
| Cow position: | chr13:15520372-15520018 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 57 |
| Conread position: | 2-363 |
| Cow position: | chr13:17308597-17308962 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 30 |
| Conread position: | 2-363 |
| Cow position: | chr13:34042240-34041879 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 211 |
| Conread position: | 2-363 |
| Cow position: | chr13:41315981-41316347 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 2-363 |
| Cow position: | chr13:58118786-58118420 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 2-364 |
| Cow position: | chr13:3654192-3653829 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 164 |
| Conread position: | 2-364 |
| Cow position: | chr13:4483924-4484288 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 165 |
| Conread position: | 2-364 |
| Cow position: | chr13:15924255-15923889 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 363 |
| Conread position: | 2-364 |
| Cow position: | chr13:23003180-23002814 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 256 |
| Conread position: | 2-364 |
| Cow position: | chr13:30238374-30238733 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 107 |
| Conread position: | 2-364 |
| Cow position: | chr13:30244556-30244190 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 322 |
| Conread position: | 2-364 |
| Cow position: | chr13:30303405-30303774 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 55 |
| Conread position: | 2-364 |
| Cow position: | chr13:30656851-30656492 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 26 |
| Conread position: | 2-364 |
| Cow position: | chr13:31733963-31733596 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 2-364 |
| Cow position: | chr13:32737696-32737333 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 30 |
| Conread position: | 2-364 |
| Cow position: | chr13:34325435-34325069 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 273 |
| Conread position: | 2-364 |
| Cow position: | chr13:34937616-34937972 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 123 |
| Conread position: | 2-364 |
| Cow position: | chr13:35030675-35031029 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 57 |
| Conread position: | 2-364 |
| Cow position: | chr13:35757370-35757737 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 2-364 |
| Cow position: | chr13:43855775-43856145 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 128, 49 |
| Conread position: | 2-364 |
| Cow position: | chr13:43982953-43982593 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 54 |
| Conread position: | 2-364 |
| Cow position: | chr13:50109583-50109942 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 57 |
| Conread position: | 2-365 |
| Cow position: | chr13:32545505-32545873 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 2-365 |
| Cow position: | chr13:57023830-57024193 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 247 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 57, 38 |
| Conread position: | 2-367 |
| Cow position: | chr13:34020594-34020228 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 234 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 126, 24 |
| Conread position: | 2-380 |
| Cow position: | chr13:1593028-1592644 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 3-293 |
| Cow position: | chr13:19413354-19413623 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 98, 19 |
| Conread position: | 3-307 |
| Cow position: | chr13:2582528-2582233 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 211 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 16, 34 |
| Conread position: | 4-343 |
| Cow position: | chr13:13324873-13325205 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 271 |
| Conread position: | 4-363 |
| Cow position: | chr13:20541906-20541548 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 236 |
| Conread position: | 4-364 |
| Cow position: | chr13:6667989-6667627 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 265 |
| Conread position: | 4-364 |
| Cow position: | chr13:31612178-31611811 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 314 |
| Conread position: | 6-285 |
| Cow position: | chr13:22831558-22831280 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 121, 202 |
| Conread position: | 11-152 |
| Cow position: | chr13:2296683-2296544 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 118, 12 |
| Conread position: | 11-246 |
| Cow position: | chr13:34911027-34910792 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 126 |
| Conread position: | 18-216 |
| Cow position: | chr13:11799579-11799381 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 113, 22 |
| Conread position: | 18-364 |
| Cow position: | chr13:13900010-13900360 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 137 |
| Conread position: | 23-732 |
| Cow position: | chr13:26844236-26844951 (view UCSC Genome Browser custom track) |
| Alignm length: | 734 |
| Alignm identity: | 497 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 33 |
| Conread position: | 24-364 |
| Cow position: | chr13:28672066-28671727 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 19, 181 |
| Conread position: | 50-299 |
| Cow position: | chr13:5625903-5625655 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 90 |
| Conread position: | 51-361 |
| Cow position: | chr13:10678941-10679250 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 284, 115 |
| Conread position: | 73-281 |
| Cow position: | chr13:18331607-18331817 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 168 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 93-330 |
| Cow position: | chr13:34766631-34766405 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 34, 8 |
| Conread position: | 102-363 |
| Cow position: | chr13:12063727-12063461 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 109-310 |
| Cow position: | chr13:57824558-57824363 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 7, 28 |
| Conread position: | 151-364 |
| Cow position: | chr13:16255104-16254889 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 175 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 9, 130 |
| Conread position: | 181-364 |
| Cow position: | chr13:11798587-11798411 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 142 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 161, 15 |
| Conread position: | 201-364 |
| Cow position: | chr13:34029739-34029905 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 15, 55 |
| Conread position: | 210-319 |
| Cow position: | chr13:12009165-12009057 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 88 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 246-565 |
| Cow position: | chr13:48358119-48358463 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 47, 31 |
| Conread position: | 319-778 |
| Cow position: | chr13:31730379-31729909 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 8 |
| Conread position: | 355-779 |
| Cow position: | chr13:31556196-31555755 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 29 |
| Conread position: | 360-777 |
| Cow position: | chr13:15450579-15450135 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 196 |
| Conread position: | 360-778 |
| Cow position: | chr13:9045315-9045752 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 362 |
| Conread position: | 363-773 |
| Cow position: | chr13:5628267-5627850 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 289 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 93, 331 |
| Conread position: | 447-738 |
| Cow position: | chr13:34765802-34765512 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 213 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 128, 75 |
| Conread position: | 447-777 |
| Cow position: | chr13:57024350-57024678 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 235 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 141, 78 |
| Conread position: | 447-780 |
| Cow position: | chr13:6758621-6758963 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 239 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 141, 39 |
| Conread position: | 456-575 |
| Cow position: | chr13:30244019-30243902 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 94 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 456-764 |
| Cow position: | chr13:17331101-17330790 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 10 |
| Conread position: | 456-779 |
| Cow position: | chr13:31733228-31732903 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 9 |
| Conread position: | 458-780 |
| Cow position: | chr13:56832739-56833066 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 111, 151 |
| Conread position: | 459-637 |
| Cow position: | chr13:34030074-34030254 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 128, 169 |
| Conread position: | 459-686 |
| Cow position: | chr13:3056473-3056241 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 459-710 |
| Cow position: | chr13:52646213-52645957 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 459-775 |
| Cow position: | chr13:30278282-30278596 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 6, 37 |
| Conread position: | 464-586 |
| Cow position: | chr13:58118241-58118119 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 464-603 |
| Cow position: | chr13:33335647-33335505 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 464-614 |
| Cow position: | chr13:35031792-35031944 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 464-684 |
| Cow position: | chr13:20541376-20541160 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 171 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 464-734 |
| Cow position: | chr13:15519838-15519564 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 141 |
| Conread position: | 464-746 |
| Cow position: | chr13:30654712-30654425 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 213 |
| Conread position: | 464-747 |
| Cow position: | chr13:60699991-60699711 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 122, 232 |
| Conread position: | 464-754 |
| Cow position: | chr13:34424430-34424724 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 464-757 |
| Cow position: | chr13:28347582-28347285 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 129, 216 |
| Conread position: | 464-770 |
| Cow position: | chr13:6640085-6640385 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 126, 80 |
| Conread position: | 464-774 |
| Cow position: | chr13:4484463-4484776 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 12 |
| Conread position: | 464-775 |
| Cow position: | chr13:44653147-44652835 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 57, 177 |
| Conread position: | 464-777 |
| Cow position: | chr13:1592486-1592169 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 464-777 |
| Cow position: | chr13:3653651-3653334 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 464-777 |
| Cow position: | chr13:30303952-30304275 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 208 |
| Conread position: | 464-778 |
| Cow position: | chr13:4942054-4942369 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 12 |
| Conread position: | 464-778 |
| Cow position: | chr13:5625337-5625001 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 464-778 |
| Cow position: | chr13:11798042-11797733 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 78 |
| Conread position: | 464-778 |
| Cow position: | chr13:13900537-13900854 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 464-778 |
| Cow position: | chr13:15543209-15543527 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 148 |
| Conread position: | 464-778 |
| Cow position: | chr13:15923711-15923396 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 255 |
| Conread position: | 464-778 |
| Cow position: | chr13:31611638-31611324 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 131 |
| Conread position: | 464-778 |
| Cow position: | chr13:32546049-32546376 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 464-778 |
| Cow position: | chr13:32737155-32736839 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 251 |
| Conread position: | 464-778 |
| Cow position: | chr13:34041665-34041352 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 66 |
| Conread position: | 464-778 |
| Cow position: | chr13:34154092-34153772 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 464-778 |
| Cow position: | chr13:34938133-34938437 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 199 |
| Conread position: | 464-778 |
| Cow position: | chr13:35757941-35758268 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 298 |
| Conread position: | 464-779 |
| Cow position: | chr13:25692353-25692664 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 64 |
| Conread position: | 464-780 |
| Cow position: | chr13:2388146-2387820 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 464-780 |
| Cow position: | chr13:14178169-14177855 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 223 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 127, 74 |
| Conread position: | 464-780 |
| Cow position: | chr13:17309141-17309456 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 169 |
| Conread position: | 464-780 |
| Cow position: | chr13:21696920-21697240 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 464-780 |
| Cow position: | chr13:21839531-21839206 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 146 |
| Conread position: | 464-780 |
| Cow position: | chr13:32984682-32984355 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 464-780 |
| Cow position: | chr13:43982430-43982115 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 215 |
| Conread position: | 464-780 |
| Cow position: | chr13:47229336-47229012 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 464-780 |
| Cow position: | chr13:49974345-49974652 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 228 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 123, 178 |
| Conread position: | 464-780 |
| Cow position: | chr13:50110120-50110440 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 64 |
| Conread position: | 464-780 |
| Cow position: | chr13:60466995-60467315 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 465-565 |
| Cow position: | chr13:23002628-23002528 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 85 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 465-586 |
| Cow position: | chr13:30238907-30239027 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 465-778 |
| Cow position: | chr13:8797122-8796812 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 208 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 32, 45 |
| Conread position: | 465-780 |
| Cow position: | chr13:44467130-44466814 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 204 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 113, 20 |
| Conread position: | 466-780 |
| Cow position: | chr13:34049408-34049728 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 229 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 21, 14 |
| Conread position: | 467-772 |
| Cow position: | chr13:42202569-42202259 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 25, 13 |
| Conread position: | 467-778 |
| Cow position: | chr13:14402426-14402111 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 467-778 |
| Cow position: | chr13:16254712-16254398 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 216 |
| Conread position: | 469-778 |
| Cow position: | chr13:6667460-6667146 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 145 |
| Conread position: | 470-678 |
| Cow position: | chr13:28670588-28670378 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 119, 157 |
| Conread position: | 470-778 |
| Cow position: | chr13:43590006-43590316 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 166 |
| Conread position: | 470-779 |
| Cow position: | chr13:34324885-34324568 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 146 |
| Conread position: | 474-780 |
| Cow position: | chr13:42218237-42217924 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 482-768 |
| Cow position: | chr13:11740199-11739908 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 204 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 9, 83 |
| Conread position: | 495-780 |
| Cow position: | chr13:13325620-13325916 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 237 |
| Conread position: | 504-770 |
| Cow position: | chr13:12633274-12633523 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 184 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 35, 71 |
| Conread position: | 522-769 |
| Cow position: | chr13:21602437-21602682 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 73, 12 |
| Conread position: | 523-705 |
| Cow position: | chr13:47861553-47861740 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 523-764 |
| Cow position: | chr13:26776390-26776629 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 220, 108 |
| Conread position: | 528-769 |
| Cow position: | chr13:37835589-37835348 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 62, 105 |
| Conread position: | 533-768 |
| Cow position: | chr13:51582698-51582936 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 554-778 |
| Cow position: | chr13:23002253-23002022 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 33, 103 |
| Conread position: | 559-709 |
| Cow position: | chr13:42276680-42276527 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 584-775 |
| Cow position: | chr13:21908304-21908112 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 63, 33 |
| Conread position: | 586-780 |
| Cow position: | chr13:678543-678737 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 29, 106 |
| Conread position: | 593-778 |
| Cow position: | chr13:30239125-30239303 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 603-776 |
| Cow position: | chr13:48358455-48358625 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 78, 102 |
| Conread position: | 653-780 |
| Cow position: | chr13:17998418-17998545 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.