Cow genome map

Conread name: Ss1.1-Thy1-THY010066E12.5

Conread position: 2-128
Cow position: chr16:18687470-18687344 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 108
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 2-215
Cow position: chr16:25156217-25156004 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 161
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 128, 32

Conread position: 2-221
Cow position: chr16:18498659-18498441 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 101

Conread position: 2-282
Cow position: chr16:31832284-31832566 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 96

Conread position: 2-292
Cow position: chr16:47473229-47473525 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 202
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 171, 0

Conread position: 2-293
Cow position: chr16:5483978-5484269 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 278

Conread position: 2-299
Cow position: chr16:2239081-2238801 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 63

Conread position: 2-300
Cow position: chr16:25188288-25188582 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 166

Conread position: 2-302
Cow position: chr16:25892377-25892673 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 20

Conread position: 2-302
Cow position: chr16:53046006-53046308 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 0

Conread position: 2-306
Cow position: chr16:49235174-49234867 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 111

Conread position: 2-310
Cow position: chr16:15184462-15184759 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 62

Conread position: 2-331
Cow position: chr16:15566399-15566730 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 305

Conread position: 2-335
Cow position: chr16:15492887-15493220 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 286

Conread position: 2-335
Cow position: chr16:26516758-26516423 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 231
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 66, 98

Conread position: 2-335
Cow position: chr16:48915494-48915163 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 227
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 87, 49

Conread position: 2-336
Cow position: chr16:23252847-23252515 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 97

Conread position: 2-343
Cow position: chr16:4302679-4302340 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 32

Conread position: 2-343
Cow position: chr16:28170712-28170371 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 16

Conread position: 2-358
Cow position: chr16:23982969-23983328 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 114

Conread position: 2-358
Cow position: chr16:25341624-25341975 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 126

Conread position: 2-361
Cow position: chr16:25171010-25171370 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 254

Conread position: 2-361
Cow position: chr16:40296519-40296155 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 0

Conread position: 2-362
Cow position: chr16:25085300-25085642 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 95

Conread position: 2-363
Cow position: chr16:407373-407010 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 217

Conread position: 2-363
Cow position: chr16:10437900-10438260 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 159

Conread position: 2-363
Cow position: chr16:21809444-21809798 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 236
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 55, 65

Conread position: 2-363
Cow position: chr16:29046681-29047046 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 111

Conread position: 2-364
Cow position: chr16:32391-32757 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 232

Conread position: 2-364
Cow position: chr16:1567795-1567428 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 0

Conread position: 2-364
Cow position: chr16:2483481-2483115 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 7

Conread position: 2-364
Cow position: chr16:2727629-2727263 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 316

Conread position: 2-364
Cow position: chr16:8816447-8816080 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 0

Conread position: 2-364
Cow position: chr16:10203780-10203414 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 164

Conread position: 2-364
Cow position: chr16:10375926-10375574 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 113

Conread position: 2-364
Cow position: chr16:12538267-12537900 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 0

Conread position: 2-364
Cow position: chr16:14666154-14665788 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 284

Conread position: 2-364
Cow position: chr16:24105363-24105727 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 28

Conread position: 2-364
Cow position: chr16:25441283-25441651 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 230

Conread position: 2-364
Cow position: chr16:25457806-25457439 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 0

Conread position: 2-364
Cow position: chr16:26663410-26663774 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 213

Conread position: 2-364
Cow position: chr16:27734133-27733767 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 169

Conread position: 2-364
Cow position: chr16:28471443-28471077 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 17

Conread position: 2-364
Cow position: chr16:29033706-29034075 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 20

Conread position: 2-364
Cow position: chr16:31592255-31591895 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 343

Conread position: 2-364
Cow position: chr16:34529980-34530337 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 234

Conread position: 2-364
Cow position: chr16:41163407-41163047 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 237

Conread position: 2-380
Cow position: chr16:2411309-2410925 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 0

Conread position: 2-681
Cow position: chr16:9930593-9931264 (view UCSC Genome Browser custom track)
Alignm length: 693
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 200

Conread position: 3-210
Cow position: chr16:15407070-15407272 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 144
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 122, 6

Conread position: 3-343
Cow position: chr16:836705-837043 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 211

Conread position: 3-364
Cow position: chr16:43897611-43897248 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 115

Conread position: 4-282
Cow position: chr16:54566095-54565820 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 190
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 126, 47

Conread position: 4-306
Cow position: chr16:16271936-16271648 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 93

Conread position: 4-329
Cow position: chr16:42185996-42185679 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 212
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 202, 6

Conread position: 4-364
Cow position: chr16:5661504-5661868 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 52

Conread position: 6-213
Cow position: chr16:36232077-36231873 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 152
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 185, 113

Conread position: 6-356
Cow position: chr16:23808081-23808436 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 167

Conread position: 6-363
Cow position: chr16:26650898-26651250 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 248
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 107, 241

Conread position: 9-364
Cow position: chr16:25257602-25257961 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 0

Conread position: 13-307
Cow position: chr16:7312135-7311831 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 204
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 51, 14

Conread position: 17-367
Cow position: chr16:16218907-16219241 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 224
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 5, 0

Conread position: 18-364
Cow position: chr16:4479309-4478958 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 0

Conread position: 23-361
Cow position: chr16:28437708-28437364 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 196

Conread position: 23-373
Cow position: chr16:28198000-28197645 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 348

Conread position: 32-364
Cow position: chr16:15476531-15476866 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 207

Conread position: 33-310
Cow position: chr16:42739417-42739144 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 23

Conread position: 41-363
Cow position: chr16:25763194-25763525 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 209
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 74, 58

Conread position: 44-357
Cow position: chr16:28867451-28867139 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 211
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 33, 47

Conread position: 46-221
Cow position: chr16:15237447-15237621 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 84, 54

Conread position: 47-343
Cow position: chr16:49256488-49256206 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 218
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 84, 10

Conread position: 53-287
Cow position: chr16:6943312-6943548 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 0

Conread position: 54-335
Cow position: chr16:46499920-46500208 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 189
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 41, 52

Conread position: 57-292
Cow position: chr16:24615758-24615993 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 155
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 74, 65

Conread position: 58-379
Cow position: chr16:30049211-30049522 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 22

Conread position: 64-365
Cow position: chr16:1431906-1432214 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 0

Conread position: 80-348
Cow position: chr16:37456289-37456021 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 49

Conread position: 81-365
Cow position: chr16:17057509-17057231 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 196
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 59, 89

Conread position: 84-269
Cow position: chr16:41755972-41755788 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 46, 129

Conread position: 90-292
Cow position: chr16:32738980-32739183 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 144
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 41, 167

Conread position: 98-621
Cow position: chr16:43852364-43851845 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 350
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 32, 39

Conread position: 107-363
Cow position: chr16:21185381-21185638 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 160
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 101, 128

Conread position: 111-342
Cow position: chr16:9444005-9443779 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 160
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 19, 39

Conread position: 117-261
Cow position: chr16:51083532-51083677 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 10, 20

Conread position: 125-335
Cow position: chr16:42671248-42671453 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 145
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 127-335
Cow position: chr16:13873683-13873891 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 141
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 94, 129

Conread position: 139-363
Cow position: chr16:28377013-28377241 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 0

Conread position: 140-363
Cow position: chr16:19152083-19151860 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 163
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 68, 205

Conread position: 149-364
Cow position: chr16:11283115-11283334 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 161-363
Cow position: chr16:41166946-41166747 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 157
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 184, 14

Conread position: 172-364
Cow position: chr16:26374422-26374616 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 148
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 173, 43

Conread position: 195-364
Cow position: chr16:23536035-23535865 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 140
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 11, 28

Conread position: 207-392
Cow position: chr16:20753170-20752984 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 135
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 19, 164

Conread position: 244-363
Cow position: chr16:15237622-15237744 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 95, 56

Conread position: 348-780
Cow position: chr16:23983384-23983817 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 19

Conread position: 355-460
Cow position: chr16:1432253-1432358 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 356-479
Cow position: chr16:25258013-25258137 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 99, 0

Conread position: 356-778
Cow position: chr16:42736326-42735873 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 129

Conread position: 356-780
Cow position: chr16:37455944-37455480 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 49

Conread position: 357-466
Cow position: chr16:23808506-23808616 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 99, 0

Conread position: 357-780
Cow position: chr16:48912279-48911848 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 285
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 74, 89

Conread position: 360-778
Cow position: chr16:37481056-37480621 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 45

Conread position: 361-780
Cow position: chr16:6716484-6716070 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 277
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 63, 35

Conread position: 447-732
Cow position: chr16:41570464-41570763 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 212
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 139, 106

Conread position: 447-769
Cow position: chr16:27714610-27714301 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 234
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 142, 18

Conread position: 447-780
Cow position: chr16:42185308-42184973 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 226
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 141, 166

Conread position: 455-778
Cow position: chr16:26663944-26664271 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 10

Conread position: 456-678
Cow position: chr16:10565563-10565341 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 166
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 133, 9

Conread position: 456-775
Cow position: chr16:9209165-9209479 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 225
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 50, 9

Conread position: 456-778
Cow position: chr16:10375405-10375080 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 9

Conread position: 456-778
Cow position: chr16:56916870-56916552 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 10

Conread position: 459-585
Cow position: chr16:11283506-11283634 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 6, 0

Conread position: 459-586
Cow position: chr16:28377414-28377542 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 6, 70

Conread position: 459-737
Cow position: chr16:26978334-26978618 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 205
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 6, 0

Conread position: 459-778
Cow position: chr16:4478787-4478451 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 0

Conread position: 459-780
Cow position: chr16:27593702-27594028 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 0

Conread position: 460-775
Cow position: chr16:25171546-25171863 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 161

Conread position: 463-780
Cow position: chr16:26105862-26105539 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 194

Conread position: 464-571
Cow position: chr16:41166568-41166461 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 464-583
Cow position: chr16:20202118-20202237 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 464-607
Cow position: chr16:25258148-25258300 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 464-607
Cow position: chr16:46707164-46707018 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 123, 0

Conread position: 464-629
Cow position: chr16:2727086-2726918 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 130
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 129, 0

Conread position: 464-630
Cow position: chr16:27733595-27733427 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 139
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 123, 16

Conread position: 464-705
Cow position: chr16:12537725-12537482 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 213

Conread position: 464-763
Cow position: chr16:28470899-28470599 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 197

Conread position: 464-768
Cow position: chr16:1860424-1860725 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 93

Conread position: 464-770
Cow position: chr16:49279642-49279944 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 203
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 151, 135

Conread position: 464-775
Cow position: chr16:33012904-33013210 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 196
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 216, 124

Conread position: 464-777
Cow position: chr16:337369-337684 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 18

Conread position: 464-777
Cow position: chr16:23801914-23801593 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 218
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 182, 240

Conread position: 464-777
Cow position: chr16:25342171-25342476 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 203

Conread position: 464-778
Cow position: chr16:406837-406521 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 212

Conread position: 464-778
Cow position: chr16:837514-837836 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 258

Conread position: 464-778
Cow position: chr16:1567250-1566936 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 43

Conread position: 464-778
Cow position: chr16:2410764-2410449 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 213

Conread position: 464-778
Cow position: chr16:2482937-2482620 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 257

Conread position: 464-778
Cow position: chr16:5484933-5485250 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 0

Conread position: 464-778
Cow position: chr16:7676255-7675939 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 131

Conread position: 464-778
Cow position: chr16:8815904-8815585 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 464-778
Cow position: chr16:14665608-14665290 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 144

Conread position: 464-778
Cow position: chr16:15185274-15185591 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 0

Conread position: 464-778
Cow position: chr16:15477043-15477362 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 212

Conread position: 464-778
Cow position: chr16:15493705-15494023 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 464-778
Cow position: chr16:15567456-15567775 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 464-778
Cow position: chr16:23535689-23535371 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 0

Conread position: 464-778
Cow position: chr16:25085818-25086136 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 170

Conread position: 464-778
Cow position: chr16:25441829-25442146 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 258

Conread position: 464-778
Cow position: chr16:25457261-25456959 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 190

Conread position: 464-778
Cow position: chr16:29047222-29047541 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 76

Conread position: 464-778
Cow position: chr16:31591717-31591397 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 215

Conread position: 464-778
Cow position: chr16:40295974-40295655 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 54

Conread position: 464-778
Cow position: chr16:49256019-49255710 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 226
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 66, 85

Conread position: 464-778
Cow position: chr16:51084341-51084671 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 230
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 124, 223

Conread position: 464-779
Cow position: chr16:29034250-29034584 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 0

Conread position: 464-780
Cow position: chr16:3089001-3088684 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 252

Conread position: 464-780
Cow position: chr16:16270938-16270613 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 0

Conread position: 464-780
Cow position: chr16:21185816-21186136 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 0

Conread position: 464-780
Cow position: chr16:25188850-25189169 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 212

Conread position: 464-780
Cow position: chr16:25738876-25739181 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 217
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 40, 32

Conread position: 464-780
Cow position: chr16:34530515-34530824 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 226
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 70, 124

Conread position: 464-780
Cow position: chr16:41162870-41162551 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 222
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 125, 199

Conread position: 464-780
Cow position: chr16:41755256-41754938 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 109

Conread position: 465-729
Cow position: chr16:51405748-51405484 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 215

Conread position: 465-777
Cow position: chr16:1432388-1432709 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 0

Conread position: 465-780
Cow position: chr16:5662045-5662356 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 135

Conread position: 465-780
Cow position: chr16:28170168-28169833 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 314

Conread position: 466-712
Cow position: chr16:26651432-26651681 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 176
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 123, 64

Conread position: 466-778
Cow position: chr16:10438456-10438771 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 147

Conread position: 466-778
Cow position: chr16:23252230-23251918 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 41

Conread position: 466-778
Cow position: chr16:43897072-43896755 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 0

Conread position: 466-779
Cow position: chr16:23670901-23671217 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 92

Conread position: 467-780
Cow position: chr16:29090086-29089773 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 220
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 122, 64

Conread position: 468-780
Cow position: chr16:19151417-19151095 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 152

Conread position: 470-779
Cow position: chr16:18498080-18497781 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 217

Conread position: 488-777
Cow position: chr16:7464053-7464347 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 0

Conread position: 493-780
Cow position: chr16:49234400-49234111 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 240

Conread position: 519-775
Cow position: chr16:56119928-56120185 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 196
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 58, 29

Conread position: 528-780
Cow position: chr16:11110774-11110525 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 183
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 115, 0

Conread position: 533-778
Cow position: chr16:3330207-3330457 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 550-771
Cow position: chr16:10968045-10967826 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 165
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 39, 85

Conread position: 553-780
Cow position: chr16:16897751-16897978 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 169
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 71, 47

Conread position: 574-778
Cow position: chr16:41166333-41166127 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 156
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 13, 27

Conread position: 579-780
Cow position: chr16:28196923-28196724 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 40, 30

Conread position: 580-777
Cow position: chr16:55049548-55049354 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 141
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 10, 37

Conread position: 581-775
Cow position: chr16:17056650-17056454 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 6, 142

Conread position: 585-780
Cow position: chr16:49221552-49221362 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 152
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 24, 90

Conread position: 586-780
Cow position: chr16:11283918-11284113 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 29, 0

Conread position: 588-780
Cow position: chr16:23808666-23808849 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 137
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 589-780
Cow position: chr16:3828940-3828752 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 137
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 20, 90

Conread position: 592-775
Cow position: chr16:41762172-41762354 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 25, 64

Conread position: 592-778
Cow position: chr16:20202332-20202513 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 147
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 23, 18

Conread position: 601-771
Cow position: chr16:55160837-55160669 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 78, 46

Conread position: 604-779
Cow position: chr16:19638410-19638581 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 10, 0

Conread position: 626-780
Cow position: chr16:29984456-29984600 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 626-780
Cow position: chr16:39824303-39824456 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 638-778
Cow position: chr16:2726850-2726710 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 118
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 647-778
Cow position: chr16:27732992-27732860 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 108
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 23, 29

Conread position: 665-777
Cow position: chr16:54324929-54324817 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 668-778
Cow position: chr16:20331191-20331300 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 0

Show alignments to all cow chromosomes.