Cow genome map

Conread name: Ss1.1-Thy1-THY010066E12.5

Conread position: 1-335
Cow position: chr17:14307834-14307497 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 231
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 139, 129

Conread position: 2-112
Cow position: chr17:24634184-24634294 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 93
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 2-121
Cow position: chr17:25737899-25738018 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 2-161
Cow position: chr17:14051880-14051720 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 68, 30

Conread position: 2-190
Cow position: chr17:43952333-43952144 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 156
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 126, 153

Conread position: 2-197
Cow position: chr17:19269131-19268935 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 0

Conread position: 2-251
Cow position: chr17:12669840-12669598 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 186
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 103, 79

Conread position: 2-262
Cow position: chr17:20811658-20811397 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 174
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 42, 60

Conread position: 2-275
Cow position: chr17:2174118-2174378 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 200
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 204, 60

Conread position: 2-287
Cow position: chr17:11376554-11376267 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 0

Conread position: 2-297
Cow position: chr17:15850634-15850931 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 0

Conread position: 2-299
Cow position: chr17:6076424-6076724 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 205
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 104, 21

Conread position: 2-309
Cow position: chr17:18194061-18194359 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 215
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 48, 208

Conread position: 2-314
Cow position: chr17:13695756-13695448 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 210
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 128, 87

Conread position: 2-328
Cow position: chr17:2092535-2092198 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 222
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 55, 145

Conread position: 2-335
Cow position: chr17:19019808-19020139 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 49

Conread position: 2-339
Cow position: chr17:15156735-15156401 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 268

Conread position: 2-342
Cow position: chr17:228078-227736 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 0

Conread position: 2-342
Cow position: chr17:14216796-14216462 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 108

Conread position: 2-342
Cow position: chr17:14911234-14910894 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 220
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 90, 143

Conread position: 2-342
Cow position: chr17:20665496-20665153 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 2-343
Cow position: chr17:1382584-1382246 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 189

Conread position: 2-343
Cow position: chr17:2262332-2262676 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 2-343
Cow position: chr17:15143137-15142795 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 254

Conread position: 2-359
Cow position: chr17:4060335-4060691 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 269

Conread position: 2-361
Cow position: chr17:15384516-15384867 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 206

Conread position: 2-363
Cow position: chr17:15436021-15436387 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 0

Conread position: 2-364
Cow position: chr17:250396-250758 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 288

Conread position: 2-364
Cow position: chr17:1880326-1880694 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 63

Conread position: 2-364
Cow position: chr17:2579851-2580219 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 0

Conread position: 2-364
Cow position: chr17:3642600-3642236 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 163

Conread position: 2-364
Cow position: chr17:5226853-5227218 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 153

Conread position: 2-364
Cow position: chr17:6119938-6120308 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 31

Conread position: 2-364
Cow position: chr17:8209336-8209704 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 2-364
Cow position: chr17:11087488-11087126 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 110

Conread position: 2-364
Cow position: chr17:14040796-14040437 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 21

Conread position: 2-364
Cow position: chr17:14894390-14894757 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 0

Conread position: 2-364
Cow position: chr17:16857288-16856922 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 58

Conread position: 2-364
Cow position: chr17:18103449-18103091 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 37

Conread position: 2-364
Cow position: chr17:20087511-20087154 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 267

Conread position: 2-364
Cow position: chr17:22132466-22132827 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 260

Conread position: 2-364
Cow position: chr17:23324224-23323857 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 0

Conread position: 2-364
Cow position: chr17:24782397-24782756 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 87

Conread position: 2-364
Cow position: chr17:31767809-31767445 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 269

Conread position: 2-364
Cow position: chr17:34156358-34156714 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 263

Conread position: 2-365
Cow position: chr17:3708542-3708178 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 20

Conread position: 2-365
Cow position: chr17:40805054-40805410 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 187

Conread position: 2-367
Cow position: chr17:21354324-21354692 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 233
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 127, 195

Conread position: 4-340
Cow position: chr17:36240276-36240606 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 219
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 30, 38

Conread position: 4-361
Cow position: chr17:18300157-18299803 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 42

Conread position: 4-364
Cow position: chr17:15324060-15324425 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 0

Conread position: 4-364
Cow position: chr17:24029761-24029408 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 94

Conread position: 6-357
Cow position: chr17:6068796-6069146 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 35

Conread position: 6-364
Cow position: chr17:1657607-1657252 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 17

Conread position: 9-361
Cow position: chr17:151635-151280 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 263

Conread position: 9-364
Cow position: chr17:6260086-6260446 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 0

Conread position: 23-239
Cow position: chr17:42265177-42265395 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 160
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 45, 28

Conread position: 28-232
Cow position: chr17:8491672-8491465 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 139
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 29-309
Cow position: chr17:3205455-3205181 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 187
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 177, 28

Conread position: 32-307
Cow position: chr17:20183690-20183957 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 185

Conread position: 32-357
Cow position: chr17:20402669-20403008 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 243
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 25, 269

Conread position: 37-343
Cow position: chr17:11026540-11026227 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 221
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 78, 256

Conread position: 51-283
Cow position: chr17:28395375-28395145 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 158
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 42, 51

Conread position: 53-292
Cow position: chr17:17130150-17130390 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 163
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 32, 44

Conread position: 66-358
Cow position: chr17:9081146-9080849 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 0

Conread position: 74-279
Cow position: chr17:2030454-2030655 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 145
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 11, 42

Conread position: 99-364
Cow position: chr17:2247741-2247473 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 140

Conread position: 103-364
Cow position: chr17:43988831-43989097 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 108-355
Cow position: chr17:25897360-25897606 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 176
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 21, 191

Conread position: 149-343
Cow position: chr17:11783225-11783417 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 161
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 134

Conread position: 163-386
Cow position: chr17:2168891-2169113 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 154
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 47, 7

Conread position: 165-343
Cow position: chr17:181694-181871 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 142
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 51, 0

Conread position: 176-362
Cow position: chr17:14238869-14239056 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 149
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 30, 12

Conread position: 183-377
Cow position: chr17:20081445-20081256 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 25, 93

Conread position: 195-364
Cow position: chr17:19268407-19268233 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 138
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 11, 0

Conread position: 209-364
Cow position: chr17:15371399-15371556 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 134, 0

Conread position: 224-364
Cow position: chr17:20100020-20099881 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 120, 42

Conread position: 245-343
Cow position: chr17:3655820-3655722 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 88
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 319-775
Cow position: chr17:20087150-20086677 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 324
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 8, 310

Conread position: 356-778
Cow position: chr17:4082683-4083113 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 116

Conread position: 356-778
Cow position: chr17:22132868-22133289 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 41

Conread position: 356-780
Cow position: chr17:22558625-22559062 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 74

Conread position: 363-780
Cow position: chr17:2174487-2174895 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 86

Conread position: 373-780
Cow position: chr17:9080754-9080329 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 114

Conread position: 404-778
Cow position: chr17:16121833-16121463 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 38

Conread position: 442-763
Cow position: chr17:17130889-17131206 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 214
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 23, 73

Conread position: 447-778
Cow position: chr17:151141-150794 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 19

Conread position: 447-780
Cow position: chr17:31532977-31533302 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 229
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 105, 0

Conread position: 456-778
Cow position: chr17:54687-54354 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 9

Conread position: 456-778
Cow position: chr17:6069321-6069641 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 9

Conread position: 456-778
Cow position: chr17:20099710-20099377 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 9

Conread position: 456-780
Cow position: chr17:2247302-2246996 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 228
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 135, 9

Conread position: 456-780
Cow position: chr17:2262872-2263200 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 9

Conread position: 463-778
Cow position: chr17:6260630-6260951 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 0

Conread position: 464-641
Cow position: chr17:42265740-42265915 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 129, 38

Conread position: 464-670
Cow position: chr17:3642061-3641850 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 0

Conread position: 464-699
Cow position: chr17:8209882-8210125 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 140
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 62, 0

Conread position: 464-735
Cow position: chr17:1787163-1786892 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 216

Conread position: 464-775
Cow position: chr17:15371999-15372313 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 144

Conread position: 464-775
Cow position: chr17:24029230-24028915 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 0

Conread position: 464-777
Cow position: chr17:1657079-1656760 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 242

Conread position: 464-778
Cow position: chr17:1880872-1881192 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 39

Conread position: 464-778
Cow position: chr17:2580392-2580715 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 96

Conread position: 464-778
Cow position: chr17:11086948-11086636 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 253

Conread position: 464-778
Cow position: chr17:14240272-14240590 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 18

Conread position: 464-778
Cow position: chr17:15324603-15324920 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 143

Conread position: 464-778
Cow position: chr17:15851463-15851779 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 109

Conread position: 464-778
Cow position: chr17:16856744-16856428 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 101

Conread position: 464-778
Cow position: chr17:19268055-19267736 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 0

Conread position: 464-778
Cow position: chr17:20081093-20080781 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 26

Conread position: 464-778
Cow position: chr17:40805583-40805898 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 255

Conread position: 464-779
Cow position: chr17:34156892-34157211 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 148

Conread position: 464-780
Cow position: chr17:250936-251244 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 229
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 92, 109

Conread position: 464-780
Cow position: chr17:1703919-1703603 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 178

Conread position: 464-780
Cow position: chr17:3655520-3655201 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 10

Conread position: 464-780
Cow position: chr17:6076974-6077279 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 217
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 84, 39

Conread position: 464-780
Cow position: chr17:6120486-6120808 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 0

Conread position: 464-780
Cow position: chr17:6611715-6611395 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 464-780
Cow position: chr17:14216261-14215935 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 64

Conread position: 464-780
Cow position: chr17:15142584-15142263 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 222
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 70, 156

Conread position: 464-780
Cow position: chr17:16899535-16899220 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 223
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 124, 178

Conread position: 464-780
Cow position: chr17:23323679-23323360 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 101

Conread position: 464-780
Cow position: chr17:24782931-24783254 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 464-780
Cow position: chr17:31767267-31766947 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 464-780
Cow position: chr17:43989272-43989594 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 149

Conread position: 465-613
Cow position: chr17:15156194-15156043 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 122, 57

Conread position: 465-778
Cow position: chr17:14894936-14895263 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 36

Conread position: 466-726
Cow position: chr17:13705319-13705585 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 190
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 55, 0

Conread position: 466-769
Cow position: chr17:19020348-19020660 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 224
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 123, 83

Conread position: 466-780
Cow position: chr17:36668-36985 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 216
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 122, 209

Conread position: 466-780
Cow position: chr17:8202741-8203047 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 218
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 128, 196

Conread position: 466-780
Cow position: chr17:20403194-20403522 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 150

Conread position: 467-757
Cow position: chr17:20488713-20489012 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 0

Conread position: 467-775
Cow position: chr17:4941953-4941629 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 224
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 120, 71

Conread position: 467-778
Cow position: chr17:239120-239428 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 187

Conread position: 468-780
Cow position: chr17:15436570-15436874 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 187

Conread position: 469-774
Cow position: chr17:5227392-5227711 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 228
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 44, 242

Conread position: 469-777
Cow position: chr17:4060875-4061187 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 144

Conread position: 469-780
Cow position: chr17:2030907-2031217 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 247

Conread position: 469-780
Cow position: chr17:18194590-18194899 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 158

Conread position: 470-778
Cow position: chr17:14040260-14039951 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 143

Conread position: 474-780
Cow position: chr17:11783626-11783946 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 231
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 115, 30

Conread position: 475-777
Cow position: chr17:3707995-3707689 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 211
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 75, 34

Conread position: 480-780
Cow position: chr17:13990561-13990259 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 206
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 8, 168

Conread position: 518-777
Cow position: chr17:21418408-21418662 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 192
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 67, 165

Conread position: 542-780
Cow position: chr17:4784000-4783761 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 171
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 48, 41

Conread position: 549-778
Cow position: chr17:2078141-2077906 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 174
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 44, 57

Conread position: 553-780
Cow position: chr17:20390224-20389994 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 168
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 35, 7

Conread position: 580-780
Cow position: chr17:2149325-2149535 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 118, 92

Conread position: 629-780
Cow position: chr17:182517-182668 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 654-778
Cow position: chr17:33284867-33284743 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 655-779
Cow position: chr17:13675322-13675197 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 26, 0

Show alignments to all cow chromosomes.