Cow genome map
| Conread name: | Ss1.1-Thy1-THY010066E12.5 |
| Conread position: | 1-367 |
| Cow position: | chr18:19406096-19405739 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 128, 29 |
| Conread position: | 2-299 |
| Cow position: | chr18:37505507-37505801 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 30 |
| Conread position: | 2-302 |
| Cow position: | chr18:8169146-8169448 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 202 |
| Conread position: | 2-312 |
| Cow position: | chr18:15855836-15856145 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 126, 111 |
| Conread position: | 2-314 |
| Cow position: | chr18:29765417-29765731 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 2-332 |
| Cow position: | chr18:16304181-16304508 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 223 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 93, 39 |
| Conread position: | 2-335 |
| Cow position: | chr18:16721882-16721548 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 231 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 129, 49 |
| Conread position: | 2-342 |
| Cow position: | chr18:51238738-51239078 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 234 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 61, 103 |
| Conread position: | 2-343 |
| Cow position: | chr18:24040294-24039944 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 2-357 |
| Cow position: | chr18:27987508-27987871 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 2-357 |
| Cow position: | chr18:40478827-40479187 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 2-358 |
| Cow position: | chr18:22602925-22603284 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 99 |
| Conread position: | 2-358 |
| Cow position: | chr18:28973458-28973085 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 292 |
| Conread position: | 2-363 |
| Cow position: | chr18:11274668-11274302 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 2-363 |
| Cow position: | chr18:33953137-33952776 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 66 |
| Conread position: | 2-363 |
| Cow position: | chr18:51660785-51661146 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 134 |
| Conread position: | 2-364 |
| Cow position: | chr18:14130835-14131198 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 237 |
| Conread position: | 2-364 |
| Cow position: | chr18:14416422-14416790 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 2-364 |
| Cow position: | chr18:16088590-16088952 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 211 |
| Conread position: | 2-364 |
| Cow position: | chr18:16176174-16175809 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 137 |
| Conread position: | 2-364 |
| Cow position: | chr18:19352819-19353176 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 41 |
| Conread position: | 2-364 |
| Cow position: | chr18:23798090-23798454 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 159 |
| Conread position: | 2-364 |
| Cow position: | chr18:25351193-25351561 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 250 |
| Conread position: | 2-364 |
| Cow position: | chr18:36508777-36509144 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 162 |
| Conread position: | 2-364 |
| Cow position: | chr18:41840380-41840003 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 2-364 |
| Cow position: | chr18:51342124-51342491 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 2-364 |
| Cow position: | chr18:52651362-52651722 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 191 |
| Conread position: | 2-364 |
| Cow position: | chr18:54171093-54170726 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 120 |
| Conread position: | 2-364 |
| Cow position: | chr18:54270952-54271306 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 108 |
| Conread position: | 2-373 |
| Cow position: | chr18:33269270-33269639 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 30 |
| Conread position: | 2-378 |
| Cow position: | chr18:27837872-27837490 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 207 |
| Conread position: | 3-334 |
| Cow position: | chr18:51276560-51276233 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 231 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 87, 36 |
| Conread position: | 4-343 |
| Cow position: | chr18:33336311-33336653 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 199 |
| Conread position: | 4-363 |
| Cow position: | chr18:54023679-54023332 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 339, 94 |
| Conread position: | 9-349 |
| Cow position: | chr18:51481286-51481628 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 71 |
| Conread position: | 10-333 |
| Cow position: | chr18:55991290-55990984 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 49 |
| Conread position: | 11-358 |
| Cow position: | chr18:55088475-55088121 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 11-364 |
| Cow position: | chr18:32652652-32653022 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 11-364 |
| Cow position: | chr18:33750470-33750818 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 12 |
| Conread position: | 16-358 |
| Cow position: | chr18:51462628-51462284 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 226 |
| Conread position: | 17-335 |
| Cow position: | chr18:25363680-25363993 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 52, 5 |
| Conread position: | 23-200 |
| Cow position: | chr18:37158514-37158343 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 23-368 |
| Cow position: | chr18:16079136-16079481 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 52 |
| Conread position: | 29-298 |
| Cow position: | chr18:208151-207890 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 34, 28 |
| Conread position: | 29-335 |
| Cow position: | chr18:29746636-29746334 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 111, 60 |
| Conread position: | 34-335 |
| Cow position: | chr18:36256748-36256456 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 95, 69 |
| Conread position: | 43-358 |
| Cow position: | chr18:10036366-10036043 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 211 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 33, 7 |
| Conread position: | 45-274 |
| Cow position: | chr18:13147067-13146832 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 38, 177 |
| Conread position: | 49-210 |
| Cow position: | chr18:54004001-54004163 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 51-335 |
| Cow position: | chr18:30849174-30848885 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 67-361 |
| Cow position: | chr18:14420668-14420958 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 61, 137 |
| Conread position: | 68-372 |
| Cow position: | chr18:51275530-51275224 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 47, 179 |
| Conread position: | 163-335 |
| Cow position: | chr18:20262782-20262611 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 45, 103 |
| Conread position: | 181-302 |
| Cow position: | chr18:4946701-4946819 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 181-363 |
| Cow position: | chr18:29237565-29237740 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 163, 35 |
| Conread position: | 356-479 |
| Cow position: | chr18:33750861-33750983 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 95, 70 |
| Conread position: | 356-775 |
| Cow position: | chr18:36256047-36255627 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 292 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 73, 248 |
| Conread position: | 360-778 |
| Cow position: | chr18:29237775-29238197 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 17 |
| Conread position: | 371-771 |
| Cow position: | chr18:207535-207124 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 266 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 83, 154 |
| Conread position: | 437-769 |
| Cow position: | chr18:29407479-29407151 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 95, 25 |
| Conread position: | 442-613 |
| Cow position: | chr18:54170576-54170404 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 9, 25 |
| Conread position: | 442-777 |
| Cow position: | chr18:40479348-40479693 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 447-771 |
| Cow position: | chr18:30848705-30848379 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 146, 278 |
| Conread position: | 458-571 |
| Cow position: | chr18:25351733-25351846 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 93 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 459-733 |
| Cow position: | chr18:51239263-51239543 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 459-780 |
| Cow position: | chr18:54271473-54271781 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 233 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 149, 106 |
| Conread position: | 464-586 |
| Cow position: | chr18:33750994-33751115 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 464-597 |
| Cow position: | chr18:33269804-33269937 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 464-649 |
| Cow position: | chr18:45946864-45946675 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 464-663 |
| Cow position: | chr18:4947037-4947242 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 464-669 |
| Cow position: | chr18:33952598-33952389 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 464-709 |
| Cow position: | chr18:32653200-32653450 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 464-730 |
| Cow position: | chr18:27988174-27988454 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 464-736 |
| Cow position: | chr18:16089124-16089395 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 32 |
| Conread position: | 464-744 |
| Cow position: | chr18:17197429-17197145 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 155, 228 |
| Conread position: | 464-768 |
| Cow position: | chr18:25364188-25364494 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 126, 157 |
| Conread position: | 464-774 |
| Cow position: | chr18:41839824-41839516 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 112 |
| Conread position: | 464-775 |
| Cow position: | chr18:15850419-15850717 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 123, 38 |
| Conread position: | 464-775 |
| Cow position: | chr18:29073978-29074285 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 58, 44 |
| Conread position: | 464-775 |
| Cow position: | chr18:38343287-38342995 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 23, 54 |
| Conread position: | 464-777 |
| Cow position: | chr18:51481867-51482169 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 148 |
| Conread position: | 464-778 |
| Cow position: | chr18:14131376-14131694 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 464-778 |
| Cow position: | chr18:14416968-14417280 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 149 |
| Conread position: | 464-778 |
| Cow position: | chr18:16175633-16175318 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 255 |
| Conread position: | 464-778 |
| Cow position: | chr18:23798632-23798947 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 255 |
| Conread position: | 464-778 |
| Cow position: | chr18:27837327-27837009 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 464-778 |
| Cow position: | chr18:28972901-28972587 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 212 |
| Conread position: | 464-778 |
| Cow position: | chr18:52651895-52652210 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 0 |
| Conread position: | 464-780 |
| Cow position: | chr18:15821836-15821527 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 216 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 206, 135 |
| Conread position: | 464-780 |
| Cow position: | chr18:16079650-16079973 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 464-780 |
| Cow position: | chr18:19353342-19353665 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 464-780 |
| Cow position: | chr18:40081425-40081109 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 109, 12 |
| Conread position: | 464-780 |
| Cow position: | chr18:47742486-47742805 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 40 |
| Conread position: | 464-780 |
| Cow position: | chr18:51275061-51274745 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 114 |
| Conread position: | 464-780 |
| Cow position: | chr18:51342668-51342989 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 464-780 |
| Cow position: | chr18:51661324-51661644 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 194 |
| Conread position: | 466-761 |
| Cow position: | chr18:36509324-36509626 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 150 |
| Conread position: | 466-770 |
| Cow position: | chr18:35313359-35313663 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 54, 36 |
| Conread position: | 466-777 |
| Cow position: | chr18:54023149-54022831 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 466-778 |
| Cow position: | chr18:37506946-37507258 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 145 |
| Conread position: | 466-780 |
| Cow position: | chr18:54005187-54004869 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 468-780 |
| Cow position: | chr18:11274119-11273814 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 60 |
| Conread position: | 477-772 |
| Cow position: | chr18:44402698-44402996 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 111, 37 |
| Conread position: | 486-780 |
| Cow position: | chr18:37335291-37335596 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 488-780 |
| Cow position: | chr18:56013582-56013880 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 207 |
| Conread position: | 495-739 |
| Cow position: | chr18:16138081-16137831 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 39, 207 |
| Conread position: | 503-683 |
| Cow position: | chr18:37489538-37489722 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 503-698 |
| Cow position: | chr18:33337232-33337422 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 158, 94 |
| Conread position: | 503-780 |
| Cow position: | chr18:16869443-16869715 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 87, 19 |
| Conread position: | 519-775 |
| Cow position: | chr18:46867857-46867603 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 143, 33 |
| Conread position: | 534-780 |
| Cow position: | chr18:19405517-19405272 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 173 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 60, 81 |
| Conread position: | 543-780 |
| Cow position: | chr18:51461991-51461750 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 181 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 559-770 |
| Cow position: | chr18:18528172-18528388 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 574-778 |
| Cow position: | chr18:25352349-25352557 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 160 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 579-767 |
| Cow position: | chr18:20834390-20834581 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 32, 129 |
| Conread position: | 580-778 |
| Cow position: | chr18:40345296-40345103 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 105, 36 |
| Conread position: | 580-780 |
| Cow position: | chr18:26246607-26246805 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 35, 137 |
| Conread position: | 586-778 |
| Cow position: | chr18:33270060-33270243 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 589-780 |
| Cow position: | chr18:42515306-42515501 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 591-778 |
| Cow position: | chr18:33751379-33751561 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 152 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 603-778 |
| Cow position: | chr18:29865485-29865310 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 12, 34 |
| Conread position: | 611-780 |
| Cow position: | chr18:51614514-51614349 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 636-778 |
| Cow position: | chr18:54170351-54170210 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 639-780 |
| Cow position: | chr18:37663507-37663648 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.