Cow genome map
| Conread name: | Ss1.1-Thy1-THY010066E12.5 |
| Conread position: | 1-343 |
| Cow position: | chr20:35156413-35156758 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 21, 122 |
| Conread position: | 2-121 |
| Cow position: | chr20:42076655-42076540 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 2-197 |
| Cow position: | chr20:7115081-7114885 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 159 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 2-206 |
| Cow position: | chr20:3271108-3271309 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 48, 102 |
| Conread position: | 2-206 |
| Cow position: | chr20:38624413-38624612 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 128, 43 |
| Conread position: | 2-214 |
| Cow position: | chr20:7085268-7085065 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 128, 77 |
| Conread position: | 2-292 |
| Cow position: | chr20:22716924-22716636 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 209 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 125, 108 |
| Conread position: | 2-297 |
| Cow position: | chr20:8834795-8834494 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 86, 114 |
| Conread position: | 2-298 |
| Cow position: | chr20:18963390-18963095 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 204, 34 |
| Conread position: | 2-301 |
| Cow position: | chr20:8003820-8003522 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 30 |
| Conread position: | 2-309 |
| Cow position: | chr20:40356657-40356959 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 211 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 126, 7 |
| Conread position: | 2-310 |
| Cow position: | chr20:2790498-2790196 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 68 |
| Conread position: | 2-312 |
| Cow position: | chr20:25850586-25850279 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 211 |
| Conread position: | 2-332 |
| Cow position: | chr20:21394000-21394328 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 266 |
| Conread position: | 2-335 |
| Cow position: | chr20:16179410-16179077 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 321 |
| Conread position: | 2-343 |
| Cow position: | chr20:823166-823504 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 215 |
| Conread position: | 2-343 |
| Cow position: | chr20:13679636-13679302 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 268 |
| Conread position: | 2-343 |
| Cow position: | chr20:19438338-19438668 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 106 |
| Conread position: | 2-358 |
| Cow position: | chr20:12438355-12437997 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 123 |
| Conread position: | 2-358 |
| Cow position: | chr20:22697674-22698025 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 49 |
| Conread position: | 2-362 |
| Cow position: | chr20:13763310-13763675 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 2-362 |
| Cow position: | chr20:29948907-29949270 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 30 |
| Conread position: | 2-363 |
| Cow position: | chr20:38351077-38351441 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 109 |
| Conread position: | 2-364 |
| Cow position: | chr20:15097471-15097107 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 141 |
| Conread position: | 2-364 |
| Cow position: | chr20:21914733-21915088 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 202 |
| Conread position: | 2-364 |
| Cow position: | chr20:23469260-23468894 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 233 |
| Conread position: | 2-364 |
| Cow position: | chr20:23799291-23799652 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 93 |
| Conread position: | 2-364 |
| Cow position: | chr20:28565191-28564821 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 2-364 |
| Cow position: | chr20:35124901-35125264 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 279 |
| Conread position: | 2-368 |
| Cow position: | chr20:15292413-15292778 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 7 |
| Conread position: | 2-379 |
| Cow position: | chr20:10840304-10839930 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 63 |
| Conread position: | 2-388 |
| Cow position: | chr20:28161176-28161563 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 30 |
| Conread position: | 2-390 |
| Cow position: | chr20:8992818-8992428 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 277 |
| Conread position: | 2-454 |
| Cow position: | chr20:25271814-25271355 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 299 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 67, 30 |
| Conread position: | 4-363 |
| Cow position: | chr20:25961504-25961868 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 4-364 |
| Cow position: | chr20:5535345-5535703 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 28 |
| Conread position: | 4-364 |
| Cow position: | chr20:18324767-18324415 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 67, 61 |
| Conread position: | 6-343 |
| Cow position: | chr20:30684730-30685066 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 291 |
| Conread position: | 6-364 |
| Cow position: | chr20:8215928-8216285 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 111 |
| Conread position: | 6-364 |
| Cow position: | chr20:27869606-27869972 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 8-287 |
| Cow position: | chr20:17704457-17704180 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 42, 113 |
| Conread position: | 8-299 |
| Cow position: | chr20:31377792-31377510 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 211 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 121, 30 |
| Conread position: | 9-364 |
| Cow position: | chr20:18314900-18314571 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 335, 60 |
| Conread position: | 11-363 |
| Cow position: | chr20:10854930-10854581 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 11 |
| Conread position: | 19-302 |
| Cow position: | chr20:3679155-3678882 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 107, 125 |
| Conread position: | 23-185 |
| Cow position: | chr20:37580505-37580666 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 36, 9 |
| Conread position: | 24-356 |
| Cow position: | chr20:20391162-20390836 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 116, 27 |
| Conread position: | 31-343 |
| Cow position: | chr20:42905640-42905947 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 79 |
| Conread position: | 46-364 |
| Cow position: | chr20:12568968-12569291 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 48-364 |
| Cow position: | chr20:8974365-8974050 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 158 |
| Conread position: | 50-299 |
| Cow position: | chr20:15065721-15065968 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 164 |
| Conread position: | 55-364 |
| Cow position: | chr20:5230255-5229953 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 165, 13 |
| Conread position: | 60-342 |
| Cow position: | chr20:14870486-14870204 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 129 |
| Conread position: | 70-367 |
| Cow position: | chr20:9128250-9127955 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 27, 32 |
| Conread position: | 80-342 |
| Cow position: | chr20:35105241-35105505 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 183 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 99-363 |
| Cow position: | chr20:13434086-13433821 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 197 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 30, 53 |
| Conread position: | 103-237 |
| Cow position: | chr20:20931049-20931181 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 27, 111 |
| Conread position: | 119-364 |
| Cow position: | chr20:17661557-17661307 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 142-377 |
| Cow position: | chr20:13664903-13664665 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 78, 175 |
| Conread position: | 186-387 |
| Cow position: | chr20:37442718-37442514 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 22, 152 |
| Conread position: | 192-355 |
| Cow position: | chr20:37580805-37580968 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 15, 95 |
| Conread position: | 204-364 |
| Cow position: | chr20:7113582-7113419 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 356-679 |
| Cow position: | chr20:18963002-18962673 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 217 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 41, 46 |
| Conread position: | 356-778 |
| Cow position: | chr20:16178923-16178503 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 64 |
| Conread position: | 442-780 |
| Cow position: | chr20:35105700-35106058 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 247 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 10, 101 |
| Conread position: | 447-650 |
| Cow position: | chr20:31498167-31497961 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 20, 9 |
| Conread position: | 447-776 |
| Cow position: | chr20:10839788-10839463 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 148, 18 |
| Conread position: | 448-742 |
| Cow position: | chr20:27897113-27896823 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 212 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 139, 9 |
| Conread position: | 456-581 |
| Cow position: | chr20:9521407-9521282 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 456-778 |
| Cow position: | chr20:15066418-15066733 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 10 |
| Conread position: | 456-778 |
| Cow position: | chr20:28564650-28564318 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 11 |
| Conread position: | 459-670 |
| Cow position: | chr20:1742800-1743013 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 8, 58 |
| Conread position: | 459-729 |
| Cow position: | chr20:38351614-38351887 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 194 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 6, 220 |
| Conread position: | 459-780 |
| Cow position: | chr20:823700-824037 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 286 |
| Conread position: | 459-780 |
| Cow position: | chr20:37581158-37581481 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 224 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 6, 67 |
| Conread position: | 462-774 |
| Cow position: | chr20:19050597-19050291 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 220 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 35, 57 |
| Conread position: | 464-565 |
| Cow position: | chr20:21915265-21915366 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 85 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 464-639 |
| Cow position: | chr20:17661127-17660953 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 130, 150 |
| Conread position: | 464-642 |
| Cow position: | chr20:16105593-16105410 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 464-669 |
| Cow position: | chr20:24615922-24615710 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 464-770 |
| Cow position: | chr20:5791304-5791595 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 210 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 464-771 |
| Cow position: | chr20:5229560-5229257 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 129, 36 |
| Conread position: | 464-774 |
| Cow position: | chr20:35125441-35125753 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 19 |
| Conread position: | 464-775 |
| Cow position: | chr20:23799830-23800146 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 464-776 |
| Cow position: | chr20:15096934-15096627 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 170 |
| Conread position: | 464-776 |
| Cow position: | chr20:27870150-27870466 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 464-778 |
| Cow position: | chr20:5535881-5536201 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 108 |
| Conread position: | 464-778 |
| Cow position: | chr20:12437763-12437449 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 213 |
| Conread position: | 464-778 |
| Cow position: | chr20:12569467-12569786 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 464-778 |
| Cow position: | chr20:13679102-13678782 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 37 |
| Conread position: | 464-778 |
| Cow position: | chr20:13763851-13764165 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 212 |
| Conread position: | 464-778 |
| Cow position: | chr20:15292949-15293254 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 115 |
| Conread position: | 464-778 |
| Cow position: | chr20:21394874-21395184 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 223 |
| Conread position: | 464-778 |
| Cow position: | chr20:23468716-23468398 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 464-778 |
| Cow position: | chr20:28161766-28162080 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 254 |
| Conread position: | 464-778 |
| Cow position: | chr20:29949450-29949781 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 302 |
| Conread position: | 464-779 |
| Cow position: | chr20:19355714-19356032 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 464-780 |
| Cow position: | chr20:8973872-8973553 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 259 |
| Conread position: | 464-780 |
| Cow position: | chr20:19438862-19439181 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 140 |
| Conread position: | 464-780 |
| Cow position: | chr20:32349216-32349534 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 103, 73 |
| Conread position: | 465-739 |
| Cow position: | chr20:10101758-10101474 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 212 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 124, 222 |
| Conread position: | 465-778 |
| Cow position: | chr20:14870002-14869693 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 45 |
| Conread position: | 465-778 |
| Cow position: | chr20:18314401-18314082 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 20 |
| Conread position: | 466-684 |
| Cow position: | chr20:13433651-13433429 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 122, 49 |
| Conread position: | 466-687 |
| Cow position: | chr20:872018-871815 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 187, 11 |
| Conread position: | 466-780 |
| Cow position: | chr20:5465997-5466302 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 214 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 111, 19 |
| Conread position: | 467-732 |
| Cow position: | chr20:7083458-7083193 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 178 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 116, 28 |
| Conread position: | 467-780 |
| Cow position: | chr20:8216463-8216779 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 257 |
| Conread position: | 468-775 |
| Cow position: | chr20:13787014-13787320 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 199 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 128, 143 |
| Conread position: | 469-780 |
| Cow position: | chr20:2788199-2787882 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 45, 209 |
| Conread position: | 473-770 |
| Cow position: | chr20:20410600-20410303 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 113, 226 |
| Conread position: | 474-780 |
| Cow position: | chr20:18323962-18323670 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 10, 45 |
| Conread position: | 479-778 |
| Cow position: | chr20:25849854-25849557 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 36 |
| Conread position: | 484-778 |
| Cow position: | chr20:30686537-30686837 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 12 |
| Conread position: | 498-780 |
| Cow position: | chr20:13499091-13499378 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 199 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 75, 83 |
| Conread position: | 509-780 |
| Cow position: | chr20:10854349-10854072 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 201 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 78, 96 |
| Conread position: | 511-778 |
| Cow position: | chr20:13664052-13663790 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 78, 145 |
| Conread position: | 519-778 |
| Cow position: | chr20:9343971-9344232 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 25 |
| Conread position: | 542-775 |
| Cow position: | chr20:13768816-13769047 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 46, 71 |
| Conread position: | 560-742 |
| Cow position: | chr20:27338251-27338438 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 575-780 |
| Cow position: | chr20:9521075-9520871 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 19, 133 |
| Conread position: | 580-778 |
| Cow position: | chr20:21915696-21915895 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 580-780 |
| Cow position: | chr20:22210118-22210310 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 29, 8 |
| Conread position: | 620-778 |
| Cow position: | chr20:17660639-17660478 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 638-780 |
| Cow position: | chr20:30429395-30429536 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 66, 0 |
Show alignments to all cow chromosomes.