Cow genome map
| Conread name: | Ss1.1-Thy1-THY010066E12.5 |
| Conread position: | 1-362 |
| Cow position: | chr21:4589469-4589113 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 137 |
| Conread position: | 2-146 |
| Cow position: | chr21:6340084-6340229 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 2-152 |
| Cow position: | chr21:46916105-46916251 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 126, 95 |
| Conread position: | 2-169 |
| Cow position: | chr21:20743987-20743820 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 57, 114 |
| Conread position: | 2-186 |
| Cow position: | chr21:12803531-12803348 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 123, 31 |
| Conread position: | 2-203 |
| Cow position: | chr21:26650559-26650761 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 2-214 |
| Cow position: | chr21:1689701-1689485 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 2-274 |
| Cow position: | chr21:7267007-7266740 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 210 |
| Conread position: | 2-284 |
| Cow position: | chr21:33252031-33252308 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 35 |
| Conread position: | 2-285 |
| Cow position: | chr21:18819645-18819358 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 161 |
| Conread position: | 2-304 |
| Cow position: | chr21:27282911-27283214 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 194 |
| Conread position: | 2-307 |
| Cow position: | chr21:13284090-13284386 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 124, 63 |
| Conread position: | 2-314 |
| Cow position: | chr21:27070743-27070429 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 2-320 |
| Cow position: | chr21:27565920-27566244 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 21 |
| Conread position: | 2-335 |
| Cow position: | chr21:31559135-31558805 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 211 |
| Conread position: | 2-342 |
| Cow position: | chr21:21915211-21915551 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 78 |
| Conread position: | 2-343 |
| Cow position: | chr21:2476023-2475680 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 2-358 |
| Cow position: | chr21:11406478-11406117 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 2-359 |
| Cow position: | chr21:37046138-37046500 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 2-363 |
| Cow position: | chr21:1192276-1192642 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 2-363 |
| Cow position: | chr21:11453138-11452775 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 114 |
| Conread position: | 2-363 |
| Cow position: | chr21:12055483-12055120 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 269 |
| Conread position: | 2-364 |
| Cow position: | chr21:1287700-1287335 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 55 |
| Conread position: | 2-364 |
| Cow position: | chr21:2540563-2540207 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 340, 110 |
| Conread position: | 2-364 |
| Cow position: | chr21:2883224-2882855 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 2-364 |
| Cow position: | chr21:3779291-3779651 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 242 |
| Conread position: | 2-364 |
| Cow position: | chr21:4077355-4077719 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 69 |
| Conread position: | 2-364 |
| Cow position: | chr21:6622108-6622474 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 82 |
| Conread position: | 2-364 |
| Cow position: | chr21:10567193-10567560 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 187 |
| Conread position: | 2-364 |
| Cow position: | chr21:11506114-11506480 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 190 |
| Conread position: | 2-364 |
| Cow position: | chr21:13313290-13313646 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 197 |
| Conread position: | 2-364 |
| Cow position: | chr21:28735754-28736121 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 0 |
| Conread position: | 2-364 |
| Cow position: | chr21:30599403-30599039 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 221 |
| Conread position: | 2-364 |
| Cow position: | chr21:35144281-35144645 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 217 |
| Conread position: | 2-364 |
| Cow position: | chr21:37371763-37372124 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 289 |
| Conread position: | 2-364 |
| Cow position: | chr21:39425581-39425946 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 47 |
| Conread position: | 2-364 |
| Cow position: | chr21:40271156-40270789 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 2-364 |
| Cow position: | chr21:47941377-47941741 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 70 |
| Conread position: | 2-364 |
| Cow position: | chr21:48116625-48116985 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 217 |
| Conread position: | 2-365 |
| Cow position: | chr21:30562327-30562688 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 153 |
| Conread position: | 2-368 |
| Cow position: | chr21:4091166-4091536 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 368 |
| Conread position: | 2-372 |
| Cow position: | chr21:4094024-4094395 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 42 |
| Conread position: | 2-377 |
| Cow position: | chr21:467414-467775 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 28 |
| Conread position: | 2-380 |
| Cow position: | chr21:23861844-23862219 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 136 |
| Conread position: | 2-464 |
| Cow position: | chr21:2511413-2511876 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 304 |
| Conread position: | 3-357 |
| Cow position: | chr21:29603-29958 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 122 |
| Conread position: | 3-364 |
| Cow position: | chr21:146448-146812 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 216 |
| Conread position: | 3-364 |
| Cow position: | chr21:10850602-10850963 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 204 |
| Conread position: | 4-215 |
| Cow position: | chr21:26095335-26095548 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 51, 149 |
| Conread position: | 4-257 |
| Cow position: | chr21:25975798-25976053 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 66, 61 |
| Conread position: | 4-364 |
| Cow position: | chr21:2416740-2417098 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 9 |
| Conread position: | 4-364 |
| Cow position: | chr21:2711024-2711373 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 340, 184 |
| Conread position: | 4-364 |
| Cow position: | chr21:37148557-37148917 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 247 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 46, 32 |
| Conread position: | 4-364 |
| Cow position: | chr21:47949586-47949944 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 77 |
| Conread position: | 6-206 |
| Cow position: | chr21:6632193-6632000 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 111, 126 |
| Conread position: | 6-255 |
| Cow position: | chr21:21518045-21518294 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 179 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 123, 198 |
| Conread position: | 6-305 |
| Cow position: | chr21:359890-360177 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 108 |
| Conread position: | 6-364 |
| Cow position: | chr21:9892461-9892792 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 338, 114 |
| Conread position: | 9-359 |
| Cow position: | chr21:23812705-23813057 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 14 |
| Conread position: | 17-287 |
| Cow position: | chr21:2940078-2939807 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 184 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 113, 34 |
| Conread position: | 19-367 |
| Cow position: | chr21:20174957-20175312 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 234 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 110, 306 |
| Conread position: | 24-305 |
| Cow position: | chr21:23298749-23298474 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 40, 102 |
| Conread position: | 24-364 |
| Cow position: | chr21:23603091-23603423 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 320, 66 |
| Conread position: | 32-357 |
| Cow position: | chr21:39087554-39087881 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 104 |
| Conread position: | 56-358 |
| Cow position: | chr21:26637625-26637326 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 81 |
| Conread position: | 58-234 |
| Cow position: | chr21:28255777-28255963 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 67-364 |
| Cow position: | chr21:2502453-2502754 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 232 |
| Conread position: | 70-364 |
| Cow position: | chr21:18817964-18817671 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 228 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 127, 34 |
| Conread position: | 117-358 |
| Cow position: | chr21:25782274-25782520 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 13, 39 |
| Conread position: | 143-364 |
| Cow position: | chr21:5840606-5840381 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 150-364 |
| Cow position: | chr21:5015626-5015422 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 195, 62 |
| Conread position: | 160-363 |
| Cow position: | chr21:46916352-46916557 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 167 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 39 |
| Conread position: | 165-363 |
| Cow position: | chr21:27149594-27149793 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 163 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 43, 114 |
| Conread position: | 181-364 |
| Cow position: | chr21:21944066-21943879 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 209-364 |
| Cow position: | chr21:28256155-28256313 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 244-364 |
| Cow position: | chr21:4184664-4184787 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 356-775 |
| Cow position: | chr21:45786484-45786056 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 277 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 84, 122 |
| Conread position: | 356-780 |
| Cow position: | chr21:217980-218405 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 50 |
| Conread position: | 363-777 |
| Cow position: | chr21:21915623-21916064 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 120 |
| Conread position: | 363-780 |
| Cow position: | chr21:21519567-21519979 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 280 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 109, 9 |
| Conread position: | 429-777 |
| Cow position: | chr21:47941973-47942323 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 175 |
| Conread position: | 442-778 |
| Cow position: | chr21:2417253-2417591 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 270 |
| Conread position: | 447-769 |
| Cow position: | chr21:34001632-34001304 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 7, 19 |
| Conread position: | 448-694 |
| Cow position: | chr21:2540035-2539786 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 9, 19 |
| Conread position: | 456-747 |
| Cow position: | chr21:25782689-25782984 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 211 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 121, 10 |
| Conread position: | 456-774 |
| Cow position: | chr21:2712019-2712309 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 236 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 456-777 |
| Cow position: | chr21:5840210-5839887 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 9 |
| Conread position: | 459-580 |
| Cow position: | chr21:11452602-11452479 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 459-778 |
| Cow position: | chr21:30132-30449 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 192 |
| Conread position: | 463-664 |
| Cow position: | chr21:37718960-37718762 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 70, 86 |
| Conread position: | 464-565 |
| Cow position: | chr21:4077894-4077995 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 84 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 464-581 |
| Cow position: | chr21:28613155-28613272 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 96 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 464-607 |
| Cow position: | chr21:26637137-26636996 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 464-634 |
| Cow position: | chr21:6624833-6625007 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 123, 39 |
| Conread position: | 464-649 |
| Cow position: | chr21:46916736-46916925 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 464-668 |
| Cow position: | chr21:13313820-13314024 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 123, 25 |
| Conread position: | 464-693 |
| Cow position: | chr21:48292510-48292746 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 125, 67 |
| Conread position: | 464-699 |
| Cow position: | chr21:29625683-29625444 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 177 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 464-705 |
| Cow position: | chr21:10567731-10567973 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 123, 102 |
| Conread position: | 464-709 |
| Cow position: | chr21:37046683-37046930 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 184 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 124, 30 |
| Conread position: | 464-730 |
| Cow position: | chr21:5018171-5018442 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 260 |
| Conread position: | 464-731 |
| Cow position: | chr21:360704-360991 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 464-735 |
| Cow position: | chr21:37935885-37936160 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 464-770 |
| Cow position: | chr21:23297761-23297458 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 115, 13 |
| Conread position: | 464-770 |
| Cow position: | chr21:40080357-40080663 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 200 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 23, 18 |
| Conread position: | 464-775 |
| Cow position: | chr21:45782542-45782857 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 214 |
| Conread position: | 464-777 |
| Cow position: | chr21:1287157-1286830 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 235 |
| Conread position: | 464-777 |
| Cow position: | chr21:9892950-9893269 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 205 |
| Conread position: | 464-777 |
| Cow position: | chr21:27284513-27284844 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 464-778 |
| Cow position: | chr21:146990-147303 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 221 |
| Conread position: | 464-778 |
| Cow position: | chr21:1192818-1193132 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 165 |
| Conread position: | 464-778 |
| Cow position: | chr21:3169457-3169768 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 220 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 127, 142 |
| Conread position: | 464-778 |
| Cow position: | chr21:4184965-4185302 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 142 |
| Conread position: | 464-778 |
| Cow position: | chr21:10851140-10851462 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 268 |
| Conread position: | 464-778 |
| Cow position: | chr21:26402427-26402111 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 164 |
| Conread position: | 464-778 |
| Cow position: | chr21:27069907-27069587 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 256 |
| Conread position: | 464-778 |
| Cow position: | chr21:30598414-30598103 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 113 |
| Conread position: | 464-778 |
| Cow position: | chr21:31515267-31514939 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 464-778 |
| Cow position: | chr21:35144818-35145136 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 149 |
| Conread position: | 464-778 |
| Cow position: | chr21:40270614-40270296 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 265 |
| Conread position: | 464-780 |
| Cow position: | chr21:2511902-2512226 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 184 |
| Conread position: | 464-780 |
| Cow position: | chr21:2673946-2673624 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 464-780 |
| Cow position: | chr21:11506657-11506991 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 236 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 464-780 |
| Cow position: | chr21:12054943-12054638 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 123, 61 |
| Conread position: | 464-780 |
| Cow position: | chr21:18817491-18817169 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 304 |
| Conread position: | 464-780 |
| Cow position: | chr21:27036340-27036020 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 464-780 |
| Cow position: | chr21:28256494-28256804 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 83 |
| Conread position: | 464-780 |
| Cow position: | chr21:34823153-34822833 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 464-780 |
| Cow position: | chr21:37372298-37372617 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 172 |
| Conread position: | 464-780 |
| Cow position: | chr21:39426120-39426440 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 464-780 |
| Cow position: | chr21:42914426-42914744 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 210 |
| Conread position: | 465-778 |
| Cow position: | chr21:2882676-2882361 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 255 |
| Conread position: | 465-778 |
| Cow position: | chr21:3779829-3780147 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 465-778 |
| Cow position: | chr21:33253244-33253559 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 50 |
| Conread position: | 466-753 |
| Cow position: | chr21:36979850-36979564 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 169, 107 |
| Conread position: | 466-778 |
| Cow position: | chr21:4588931-4588600 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 66 |
| Conread position: | 467-780 |
| Cow position: | chr21:1689097-1688774 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 219 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 467-780 |
| Cow position: | chr21:28985180-28985485 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 42, 146 |
| Conread position: | 467-780 |
| Cow position: | chr21:37149099-37149415 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 224 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 122, 188 |
| Conread position: | 469-780 |
| Cow position: | chr21:467934-468235 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 470-778 |
| Cow position: | chr21:26835957-26836274 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 253 |
| Conread position: | 500-770 |
| Cow position: | chr21:26849924-26849649 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 201 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 94, 44 |
| Conread position: | 505-778 |
| Cow position: | chr21:28736275-28736552 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 208 |
| Conread position: | 512-780 |
| Cow position: | chr21:40683337-40683066 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 250 |
| Conread position: | 517-777 |
| Cow position: | chr21:47646455-47646705 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 46 |
| Conread position: | 519-771 |
| Cow position: | chr21:4789529-4789281 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 525-780 |
| Cow position: | chr21:11452424-11452173 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 63, 147 |
| Conread position: | 559-772 |
| Cow position: | chr21:30562639-30562849 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 174 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 28, 152 |
| Conread position: | 574-758 |
| Cow position: | chr21:27566916-27567110 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 600-778 |
| Cow position: | chr21:28613549-28613725 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 603-778 |
| Cow position: | chr21:4077985-4078153 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 17, 70 |
| Conread position: | 617-780 |
| Cow position: | chr21:5012487-5012327 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 659-778 |
| Cow position: | chr21:10567961-10568080 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 94 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.