Cow genome map

Conread name: Ss1.1-Thy1-THY010066E12.5

Conread position: 1-145
Cow position: chr22:15851665-15851810 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 102, 0

Conread position: 2-96
Cow position: chr22:44490230-44490324 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 84
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 2-152
Cow position: chr22:5932481-5932328 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 66, 120

Conread position: 2-185
Cow position: chr22:36275781-36275964 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 124, 20

Conread position: 2-210
Cow position: chr22:16814231-16814440 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 0

Conread position: 2-211
Cow position: chr22:46581243-46581033 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 159
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 125, 0

Conread position: 2-231
Cow position: chr22:13918180-13918416 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 0

Conread position: 2-238
Cow position: chr22:525343-525105 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 153

Conread position: 2-252
Cow position: chr22:1269442-1269194 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 0

Conread position: 2-282
Cow position: chr22:15955826-15955548 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 202
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 126, 30

Conread position: 2-301
Cow position: chr22:36580455-36580149 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 208
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 55, 122

Conread position: 2-309
Cow position: chr22:36552104-36551802 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 207
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 30, 34

Conread position: 2-310
Cow position: chr22:1806213-1806519 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 206
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 22, 50

Conread position: 2-310
Cow position: chr22:46630696-46630388 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 32

Conread position: 2-312
Cow position: chr22:44352628-44352328 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 32

Conread position: 2-330
Cow position: chr22:24536096-24536422 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 234
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 125, 55

Conread position: 2-335
Cow position: chr22:6502783-6502456 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 30

Conread position: 2-342
Cow position: chr22:17328388-17328046 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 0

Conread position: 2-343
Cow position: chr22:693968-694312 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 0

Conread position: 2-343
Cow position: chr22:1879138-1879480 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 20

Conread position: 2-343
Cow position: chr22:3278011-3277671 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 269

Conread position: 2-343
Cow position: chr22:5232937-5232593 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 0

Conread position: 2-358
Cow position: chr22:12731324-12730963 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 233

Conread position: 2-358
Cow position: chr22:27284377-27284731 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 54

Conread position: 2-363
Cow position: chr22:6021008-6021372 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 187

Conread position: 2-363
Cow position: chr22:27309432-27309066 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 0

Conread position: 2-363
Cow position: chr22:42991523-42991889 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 0

Conread position: 2-364
Cow position: chr22:537445-537811 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 64

Conread position: 2-364
Cow position: chr22:560353-559990 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 125

Conread position: 2-364
Cow position: chr22:5308452-5308810 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 135

Conread position: 2-364
Cow position: chr22:10909488-10909126 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 30

Conread position: 2-364
Cow position: chr22:11032102-11032463 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 13

Conread position: 2-364
Cow position: chr22:15313604-15313238 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 135

Conread position: 2-364
Cow position: chr22:18027624-18027992 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 0

Conread position: 2-364
Cow position: chr22:18816034-18815669 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 0

Conread position: 2-364
Cow position: chr22:24950441-24950808 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 0

Conread position: 2-364
Cow position: chr22:31313691-31314057 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 184

Conread position: 2-364
Cow position: chr22:31334686-31334324 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 211

Conread position: 2-364
Cow position: chr22:34168682-34169049 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 0

Conread position: 2-364
Cow position: chr22:35672011-35671644 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 0

Conread position: 2-364
Cow position: chr22:35907042-35906692 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 26

Conread position: 2-364
Cow position: chr22:36861182-36860819 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 223

Conread position: 2-364
Cow position: chr22:39469171-39468810 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 216

Conread position: 2-364
Cow position: chr22:44369280-44368916 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 21

Conread position: 2-364
Cow position: chr22:44396794-44397161 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 0

Conread position: 2-364
Cow position: chr22:44934328-44934695 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 0

Conread position: 2-364
Cow position: chr22:48004885-48005251 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 64

Conread position: 2-378
Cow position: chr22:23854014-23854374 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 30

Conread position: 2-379
Cow position: chr22:37072726-37072357 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 24

Conread position: 3-189
Cow position: chr22:1322475-1322661 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 144
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 124, 95

Conread position: 3-364
Cow position: chr22:19143339-19142979 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 216

Conread position: 4-210
Cow position: chr22:11781800-11781593 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 154
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 136, 148

Conread position: 4-299
Cow position: chr22:3306048-3305755 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 205

Conread position: 6-216
Cow position: chr22:36269583-36269796 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 159
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 109, 45

Conread position: 6-248
Cow position: chr22:35942428-35942188 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 167
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 124, 22

Conread position: 6-364
Cow position: chr22:1520659-1520309 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 74

Conread position: 9-236
Cow position: chr22:37132779-37133007 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 47

Conread position: 9-364
Cow position: chr22:326812-326458 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 38

Conread position: 9-364
Cow position: chr22:34599763-34600105 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 21

Conread position: 10-343
Cow position: chr22:8739860-8739526 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 279

Conread position: 10-356
Cow position: chr22:5940934-5940600 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 241
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 45, 26

Conread position: 18-282
Cow position: chr22:9276907-9277168 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 174
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 110, 33

Conread position: 18-363
Cow position: chr22:20240482-20240133 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 41

Conread position: 29-364
Cow position: chr22:21589712-21590048 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 84

Conread position: 29-364
Cow position: chr22:36184128-36184468 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 0

Conread position: 35-127
Cow position: chr22:36280068-36280162 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 82
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 5, 0

Conread position: 35-363
Cow position: chr22:8135729-8135397 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 244
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 119, 21

Conread position: 37-363
Cow position: chr22:14629797-14630128 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 0

Conread position: 41-335
Cow position: chr22:8649345-8649057 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 199
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 225, 10

Conread position: 43-326
Cow position: chr22:37867512-37867241 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 188
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 16, 33

Conread position: 44-358
Cow position: chr22:16609116-16608807 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 208
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 34, 56

Conread position: 47-274
Cow position: chr22:291762-291534 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 169
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 9, 19

Conread position: 48-274
Cow position: chr22:4230439-4230214 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 157
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 81, 31

Conread position: 53-363
Cow position: chr22:42988958-42989273 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 0

Conread position: 56-310
Cow position: chr22:36591094-36590853 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 177
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 39, 0

Conread position: 57-368
Cow position: chr22:35828095-35827782 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 213
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 10, 36

Conread position: 62-295
Cow position: chr22:1282950-1282721 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 141
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 68, 94

Conread position: 69-358
Cow position: chr22:18325401-18325112 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 190
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 59, 44

Conread position: 73-335
Cow position: chr22:23948793-23948538 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 177
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 17, 37

Conread position: 79-335
Cow position: chr22:44457477-44457734 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 204

Conread position: 81-364
Cow position: chr22:44491457-44491744 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 179

Conread position: 81-373
Cow position: chr22:2395568-2395276 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 203
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 135, 6

Conread position: 95-284
Cow position: chr22:11640185-11639996 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 35, 122

Conread position: 104-287
Cow position: chr22:2627328-2627148 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 26, 105

Conread position: 109-473
Cow position: chr22:28659855-28659490 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 241
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 22, 47

Conread position: 117-364
Cow position: chr22:6332181-6332430 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 173
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 112, 12

Conread position: 160-335
Cow position: chr22:41419015-41418847 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 11, 76

Conread position: 181-363
Cow position: chr22:11804533-11804347 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 150
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 27, 0

Conread position: 192-364
Cow position: chr22:9287123-9287298 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 138
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 38, 50

Conread position: 197-364
Cow position: chr22:36129454-36129625 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 137
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 9, 0

Conread position: 213-362
Cow position: chr22:1322777-1322925 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 131, 27

Conread position: 219-352
Cow position: chr22:37133205-37133340 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 11, 112

Conread position: 241-359
Cow position: chr22:6142792-6142672 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 94, 0

Conread position: 320-769
Cow position: chr22:96579-96156 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 302
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 159, 7

Conread position: 356-477
Cow position: chr22:37133409-37133529 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 100, 42

Conread position: 356-571
Cow position: chr22:8135353-8135124 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 169
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 72, 39

Conread position: 356-694
Cow position: chr22:36551485-36551128 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 256
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 92, 38

Conread position: 356-778
Cow position: chr22:559948-559501 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 277

Conread position: 356-778
Cow position: chr22:44934738-44935176 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 357-732
Cow position: chr22:5232525-5232130 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 67

Conread position: 357-780
Cow position: chr22:34600142-34600555 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 280
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 69, 80

Conread position: 363-685
Cow position: chr22:1806609-1806951 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 231
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 93, 329

Conread position: 393-779
Cow position: chr22:13773345-13773742 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 209
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 167, 226

Conread position: 414-701
Cow position: chr22:23770588-23770883 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 211
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 52, 123

Conread position: 442-770
Cow position: chr22:13673946-13673610 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 232
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 10, 245

Conread position: 447-687
Cow position: chr22:36276492-36276745 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 180
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 10, 20

Conread position: 447-693
Cow position: chr22:36579713-36579466 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 172
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 140, 35

Conread position: 448-777
Cow position: chr22:11032620-11032954 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 17

Conread position: 450-766
Cow position: chr22:46612749-46613057 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 16

Conread position: 456-775
Cow position: chr22:9045013-9045331 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 222
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 64, 9

Conread position: 456-778
Cow position: chr22:326288-325983 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 233
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 75, 9

Conread position: 456-778
Cow position: chr22:537982-538310 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 9

Conread position: 456-778
Cow position: chr22:44477492-44477827 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 9

Conread position: 456-780
Cow position: chr22:27308894-27308568 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 10

Conread position: 456-780
Cow position: chr22:36270101-36270410 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 223
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 268, 11

Conread position: 459-778
Cow position: chr22:37133534-37133860 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 183

Conread position: 461-779
Cow position: chr22:41418428-41418116 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 464-586
Cow position: chr22:6142494-6142377 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 464-586
Cow position: chr22:35671466-35671345 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 113, 0

Conread position: 464-624
Cow position: chr22:14630307-14630470 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 124, 0

Conread position: 464-670
Cow position: chr22:31314235-31314444 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 164
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 130, 0

Conread position: 464-670
Cow position: chr22:37072196-37071983 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 160
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 127, 0

Conread position: 464-691
Cow position: chr22:24950986-24951228 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 176
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 69, 0

Conread position: 464-715
Cow position: chr22:35913270-35913020 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 172
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 126, 37

Conread position: 464-728
Cow position: chr22:44457943-44458213 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 193
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 147, 9

Conread position: 464-731
Cow position: chr22:44350774-44350503 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 166

Conread position: 464-732
Cow position: chr22:44368729-44368455 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 142

Conread position: 464-755
Cow position: chr22:16201815-16202112 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 0

Conread position: 464-762
Cow position: chr22:37292777-37292474 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 464-770
Cow position: chr22:8737441-8737137 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 247

Conread position: 464-771
Cow position: chr22:38175984-38176289 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 210
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 75, 149

Conread position: 464-771
Cow position: chr22:40721365-40721682 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 210
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 115, 198

Conread position: 464-774
Cow position: chr22:522505-522193 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 6

Conread position: 464-774
Cow position: chr22:12730795-12730485 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 464-776
Cow position: chr22:15313063-15312746 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 246

Conread position: 464-776
Cow position: chr22:21590226-21590539 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 251

Conread position: 464-778
Cow position: chr22:1323097-1323413 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 71

Conread position: 464-778
Cow position: chr22:1520135-1519813 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 0

Conread position: 464-778
Cow position: chr22:6332599-6332916 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 26

Conread position: 464-778
Cow position: chr22:6502256-6501930 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 39

Conread position: 464-778
Cow position: chr22:17327566-17327250 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 54

Conread position: 464-778
Cow position: chr22:18815492-18815159 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 0

Conread position: 464-778
Cow position: chr22:19142801-19142486 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 93

Conread position: 464-778
Cow position: chr22:31334147-31333841 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 0

Conread position: 464-778
Cow position: chr22:34169227-34169545 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 464-778
Cow position: chr22:36184646-36184966 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 199

Conread position: 464-778
Cow position: chr22:37140788-37141105 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 79

Conread position: 464-778
Cow position: chr22:39468632-39468314 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 300

Conread position: 464-778
Cow position: chr22:42992065-42992381 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 32

Conread position: 464-778
Cow position: chr22:44397334-44397639 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 16

Conread position: 464-780
Cow position: chr22:290814-290494 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 0

Conread position: 464-780
Cow position: chr22:694509-694830 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 0

Conread position: 464-780
Cow position: chr22:1281842-1281511 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 54

Conread position: 464-780
Cow position: chr22:1879682-1880012 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 309

Conread position: 464-780
Cow position: chr22:3277471-3277151 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 0

Conread position: 464-780
Cow position: chr22:3803077-3803391 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 54

Conread position: 464-780
Cow position: chr22:5937267-5936943 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 232
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 90, 155

Conread position: 464-780
Cow position: chr22:6021551-6021873 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 0

Conread position: 464-780
Cow position: chr22:6602320-6602025 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 0

Conread position: 464-780
Cow position: chr22:10908948-10908630 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 236

Conread position: 464-780
Cow position: chr22:18028170-18028494 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 211

Conread position: 464-780
Cow position: chr22:20239953-20239633 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 262

Conread position: 464-780
Cow position: chr22:37268049-37268374 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 46

Conread position: 465-677
Cow position: chr22:41240264-41240471 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 154
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 87, 0

Conread position: 465-693
Cow position: chr22:36590396-36590161 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 166
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 31, 0

Conread position: 465-780
Cow position: chr22:11804166-11803845 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 0

Conread position: 467-778
Cow position: chr22:36860641-36860333 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 467-779
Cow position: chr22:37412044-37412345 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 205
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 20, 9

Conread position: 468-705
Cow position: chr22:6876392-6876157 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 161
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 136, 81

Conread position: 487-775
Cow position: chr22:15053631-15053914 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 207
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 102, 15

Conread position: 490-778
Cow position: chr22:35906475-35906184 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 221
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 97, 162

Conread position: 503-769
Cow position: chr22:3273234-3272966 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 196
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 55, 75

Conread position: 503-778
Cow position: chr22:40370378-40370652 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 201
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 82, 125

Conread position: 503-780
Cow position: chr22:316430-316725 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 210
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 55, 252

Conread position: 505-780
Cow position: chr22:19319942-19320222 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 201
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 28, 0

Conread position: 522-780
Cow position: chr22:13547823-13547564 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 180
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 71, 36

Conread position: 525-775
Cow position: chr22:4298705-4298956 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 181
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 13, 120

Conread position: 525-780
Cow position: chr22:46580772-46580511 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 189
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 64, 0

Conread position: 527-768
Cow position: chr22:35162993-35163244 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 170
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 63, 0

Conread position: 530-775
Cow position: chr22:44606718-44606472 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 177
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 79, 55

Conread position: 530-780
Cow position: chr22:24536715-24536970 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 187
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 59, 45

Conread position: 532-780
Cow position: chr22:30677727-30677479 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 192
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 57, 80

Conread position: 538-778
Cow position: chr22:8121122-8120874 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 544-780
Cow position: chr22:19536522-19536759 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 175
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 44, 150

Conread position: 545-775
Cow position: chr22:40378696-40378930 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 165
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 42, 11

Conread position: 560-778
Cow position: chr22:1268773-1268554 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 167
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 27, 40

Conread position: 577-775
Cow position: chr22:45581927-45582119 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 152
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 12, 36

Conread position: 584-780
Cow position: chr22:44492065-44492261 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 587-775
Cow position: chr22:284057-283868 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 135
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 22, 0

Conread position: 594-768
Cow position: chr22:3305556-3305385 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 15, 136

Conread position: 605-778
Cow position: chr22:21035357-21035183 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 144
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 14, 68

Conread position: 634-780
Cow position: chr22:21195429-21195283 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 647-779
Cow position: chr22:33351755-33351886 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 128, 0

Show alignments to all cow chromosomes.