Cow genome map
| Conread name: | Ss1.1-Thy1-THY010066E12.5 |
| Conread position: | 1-307 |
| Cow position: | chr23:15877416-15877116 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 46 |
| Conread position: | 2-142 |
| Cow position: | chr23:2026767-2026626 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 2-152 |
| Cow position: | chr23:15525963-15526115 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 48, 21 |
| Conread position: | 2-172 |
| Cow position: | chr23:9545931-9546097 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 2-185 |
| Cow position: | chr23:22146902-22146718 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 150 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 2-204 |
| Cow position: | chr23:25683689-25683486 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 164 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 144 |
| Conread position: | 2-206 |
| Cow position: | chr23:31594899-31594695 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 167 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-239 |
| Cow position: | chr23:29451965-29451733 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 52 |
| Conread position: | 2-242 |
| Cow position: | chr23:11778840-11779077 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 211 |
| Conread position: | 2-255 |
| Cow position: | chr23:4434804-4435057 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 218 |
| Conread position: | 2-260 |
| Cow position: | chr23:17785977-17785717 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 2-274 |
| Cow position: | chr23:4752949-4753215 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 202, 16 |
| Conread position: | 2-294 |
| Cow position: | chr23:14965400-14965106 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 2-311 |
| Cow position: | chr23:2794884-2794576 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 17 |
| Conread position: | 2-314 |
| Cow position: | chr23:20302556-20302860 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 150 |
| Conread position: | 2-325 |
| Cow position: | chr23:20155864-20155539 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 2-330 |
| Cow position: | chr23:16616494-16616165 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 291 |
| Conread position: | 2-335 |
| Cow position: | chr23:2341440-2341775 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 11 |
| Conread position: | 2-335 |
| Cow position: | chr23:2757946-2758281 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 181 |
| Conread position: | 2-335 |
| Cow position: | chr23:14262213-14262543 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 48, 78 |
| Conread position: | 2-357 |
| Cow position: | chr23:29403590-29403239 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 87 |
| Conread position: | 2-358 |
| Cow position: | chr23:966998-966633 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 225 |
| Conread position: | 2-359 |
| Cow position: | chr23:3014745-3015103 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 304 |
| Conread position: | 2-359 |
| Cow position: | chr23:4510429-4510773 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 62 |
| Conread position: | 2-361 |
| Cow position: | chr23:13510009-13510369 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 169 |
| Conread position: | 2-363 |
| Cow position: | chr23:2312894-2312532 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 59 |
| Conread position: | 2-363 |
| Cow position: | chr23:2781862-2781505 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 116 |
| Conread position: | 2-363 |
| Cow position: | chr23:16615085-16614726 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 10 |
| Conread position: | 2-363 |
| Cow position: | chr23:23830311-23830671 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 29 |
| Conread position: | 2-363 |
| Cow position: | chr23:31447160-31447526 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 2-364 |
| Cow position: | chr23:2716740-2717104 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 217 |
| Conread position: | 2-364 |
| Cow position: | chr23:4360174-4360519 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 103 |
| Conread position: | 2-364 |
| Cow position: | chr23:4640272-4639911 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 29 |
| Conread position: | 2-364 |
| Cow position: | chr23:4817367-4817733 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 279 |
| Conread position: | 2-364 |
| Cow position: | chr23:4889024-4889396 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 97 |
| Conread position: | 2-364 |
| Cow position: | chr23:5874295-5873938 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 96 |
| Conread position: | 2-364 |
| Cow position: | chr23:15219548-15219193 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 30 |
| Conread position: | 2-364 |
| Cow position: | chr23:19489893-19490254 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 212 |
| Conread position: | 2-364 |
| Cow position: | chr23:19950242-19949886 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 222 |
| Conread position: | 2-364 |
| Cow position: | chr23:27399851-27400218 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 2-364 |
| Cow position: | chr23:28217635-28218002 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 2-364 |
| Cow position: | chr23:28913745-28914107 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 25 |
| Conread position: | 2-364 |
| Cow position: | chr23:36031024-36030662 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 30 |
| Conread position: | 2-372 |
| Cow position: | chr23:14974212-14973846 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 125 |
| Conread position: | 2-479 |
| Cow position: | chr23:26837016-26837496 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 331 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 298, 20 |
| Conread position: | 2-780 |
| Cow position: | chr23:31649593-31648815 (view UCSC Genome Browser custom track) |
| Alignm length: | 814 |
| Alignm identity: | 556 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 17 |
| Conread position: | 4-155 |
| Cow position: | chr23:2574888-2575039 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 123, 87 |
| Conread position: | 4-263 |
| Cow position: | chr23:29647905-29647649 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 95, 103 |
| Conread position: | 4-342 |
| Cow position: | chr23:1024670-1024325 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 28 |
| Conread position: | 6-363 |
| Cow position: | chr23:1402144-1401797 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 65 |
| Conread position: | 6-372 |
| Cow position: | chr23:14948386-14948025 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 245 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 125, 45 |
| Conread position: | 9-363 |
| Cow position: | chr23:15177429-15177785 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 210 |
| Conread position: | 17-364 |
| Cow position: | chr23:7364304-7364638 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 111, 34 |
| Conread position: | 20-331 |
| Cow position: | chr23:28077736-28078044 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 83 |
| Conread position: | 20-362 |
| Cow position: | chr23:27970903-27971250 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 20-362 |
| Cow position: | chr23:28108025-28108360 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 143 |
| Conread position: | 20-364 |
| Cow position: | chr23:28025032-28025381 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 340 |
| Conread position: | 23-263 |
| Cow position: | chr23:19797507-19797752 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 24-310 |
| Cow position: | chr23:22944193-22943907 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 106, 148 |
| Conread position: | 24-377 |
| Cow position: | chr23:28368153-28367800 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 322 |
| Conread position: | 51-277 |
| Cow position: | chr23:22874788-22874569 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 76, 59 |
| Conread position: | 51-330 |
| Cow position: | chr23:27169530-27169806 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 47, 126 |
| Conread position: | 69-362 |
| Cow position: | chr23:3861311-3861011 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 61, 238 |
| Conread position: | 71-362 |
| Cow position: | chr23:619021-618750 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 135, 44 |
| Conread position: | 81-308 |
| Cow position: | chr23:16499021-16498793 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 69 |
| Conread position: | 84-309 |
| Cow position: | chr23:7046215-7045990 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 56, 46 |
| Conread position: | 106-364 |
| Cow position: | chr23:3880626-3880368 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 107 |
| Conread position: | 121-364 |
| Cow position: | chr23:3706586-3706832 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 16 |
| Conread position: | 127-317 |
| Cow position: | chr23:12887506-12887326 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 79, 108 |
| Conread position: | 127-358 |
| Cow position: | chr23:2026610-2026374 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 157-272 |
| Cow position: | chr23:38794706-38794822 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 195-308 |
| Cow position: | chr23:31594580-31594465 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 213-363 |
| Cow position: | chr23:10157744-10157897 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 230-364 |
| Cow position: | chr23:11779361-11779498 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 237-364 |
| Cow position: | chr23:22146714-22146587 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 108, 40 |
| Conread position: | 244-363 |
| Cow position: | chr23:4651270-4651392 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 244-364 |
| Cow position: | chr23:15526156-15526279 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 276-778 |
| Cow position: | chr23:2794556-2794053 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 310, 443 |
| Conread position: | 318-777 |
| Cow position: | chr23:25683222-25682751 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 250 |
| Conread position: | 348-777 |
| Cow position: | chr23:15876817-15876365 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 309 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 30, 59 |
| Conread position: | 353-771 |
| Cow position: | chr23:1955094-1954668 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 273 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 159, 98 |
| Conread position: | 356-686 |
| Cow position: | chr23:4510821-4511179 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 254 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 79, 204 |
| Conread position: | 356-778 |
| Cow position: | chr23:27971294-27971735 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 336 |
| Conread position: | 356-778 |
| Cow position: | chr23:28367768-28367322 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 88 |
| Conread position: | 356-779 |
| Cow position: | chr23:1023200-1022755 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 204 |
| Conread position: | 356-780 |
| Cow position: | chr23:13510415-13510828 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 288 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 89, 49 |
| Conread position: | 360-778 |
| Cow position: | chr23:28025427-28025863 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 232 |
| Conread position: | 375-777 |
| Cow position: | chr23:38581512-38581918 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 9 |
| Conread position: | 376-636 |
| Cow position: | chr23:7045643-7045378 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 57, 81 |
| Conread position: | 427-769 |
| Cow position: | chr23:7369382-7369719 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 9 |
| Conread position: | 454-780 |
| Cow position: | chr23:15041866-15041558 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 222 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 456-778 |
| Cow position: | chr23:2781085-2780762 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 10 |
| Conread position: | 457-705 |
| Cow position: | chr23:29142925-29143156 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 168 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 459-778 |
| Cow position: | chr23:20155336-20155008 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 242 |
| Conread position: | 459-780 |
| Cow position: | chr23:5739473-5739151 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 73 |
| Conread position: | 460-773 |
| Cow position: | chr23:29402837-29402521 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 223 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 5, 217 |
| Conread position: | 462-775 |
| Cow position: | chr23:618579-618270 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 228, 140 |
| Conread position: | 464-571 |
| Cow position: | chr23:7337010-7337117 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 90 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 464-592 |
| Cow position: | chr23:28218173-28218301 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 464-706 |
| Cow position: | chr23:2717279-2717525 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 123, 78 |
| Conread position: | 464-730 |
| Cow position: | chr23:2312353-2312083 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 196 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 464-737 |
| Cow position: | chr23:16614548-16614273 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 169 |
| Conread position: | 464-745 |
| Cow position: | chr23:8286919-8287204 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 58 |
| Conread position: | 464-755 |
| Cow position: | chr23:28914283-28914574 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 89 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 464-769 |
| Cow position: | chr23:2341965-2342285 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 224 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 464-770 |
| Cow position: | chr23:6220135-6220450 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 221 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 125, 48 |
| Conread position: | 464-771 |
| Cow position: | chr23:16236567-16236264 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 129, 100 |
| Conread position: | 464-771 |
| Cow position: | chr23:17186604-17186905 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 198 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 206, 122 |
| Conread position: | 464-771 |
| Cow position: | chr23:18127390-18127090 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 202 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 132, 39 |
| Conread position: | 464-778 |
| Cow position: | chr23:965607-965293 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 272 |
| Conread position: | 464-778 |
| Cow position: | chr23:2026193-2025878 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 255 |
| Conread position: | 464-778 |
| Cow position: | chr23:2758776-2759095 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 464-778 |
| Cow position: | chr23:3880193-3879880 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 53 |
| Conread position: | 464-778 |
| Cow position: | chr23:4639736-4639422 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 101 |
| Conread position: | 464-778 |
| Cow position: | chr23:4817910-4818227 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 48 |
| Conread position: | 464-778 |
| Cow position: | chr23:4889572-4889891 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 464-778 |
| Cow position: | chr23:5873690-5873372 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 70 |
| Conread position: | 464-778 |
| Cow position: | chr23:11779672-11779985 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 271 |
| Conread position: | 464-778 |
| Cow position: | chr23:14964158-14963849 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 203 |
| Conread position: | 464-778 |
| Cow position: | chr23:15177961-15178278 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 167 |
| Conread position: | 464-778 |
| Cow position: | chr23:15526457-15526770 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 187 |
| Conread position: | 464-778 |
| Cow position: | chr23:19490424-19490748 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 464-778 |
| Cow position: | chr23:22146412-22146106 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 109 |
| Conread position: | 464-778 |
| Cow position: | chr23:25534206-25534521 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 124, 193 |
| Conread position: | 464-778 |
| Cow position: | chr23:29451452-29451147 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 464-778 |
| Cow position: | chr23:36030489-36030173 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 165 |
| Conread position: | 464-779 |
| Cow position: | chr23:2576313-2576619 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 248 |
| Conread position: | 464-780 |
| Cow position: | chr23:3707009-3707332 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 464-780 |
| Cow position: | chr23:23171388-23171708 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 464-780 |
| Cow position: | chr23:26159839-26159503 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 288 |
| Conread position: | 465-686 |
| Cow position: | chr23:15219013-15218787 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 465-778 |
| Cow position: | chr23:1956792-1957090 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 67 |
| Conread position: | 465-778 |
| Cow position: | chr23:8299480-8299175 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 217 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 132, 77 |
| Conread position: | 466-732 |
| Cow position: | chr23:1401641-1401380 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 201 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 77, 36 |
| Conread position: | 466-780 |
| Cow position: | chr23:13512001-13512314 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 203 |
| Conread position: | 466-780 |
| Cow position: | chr23:16498341-16498033 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 76 |
| Conread position: | 467-685 |
| Cow position: | chr23:11077316-11077104 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 467-697 |
| Cow position: | chr23:4753988-4754211 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 26, 135 |
| Conread position: | 469-755 |
| Cow position: | chr23:1012899-1012619 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 122, 38 |
| Conread position: | 469-778 |
| Cow position: | chr23:27400401-27400727 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 470-639 |
| Cow position: | chr23:2440960-2440789 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 117, 49 |
| Conread position: | 470-780 |
| Cow position: | chr23:19949705-19949384 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 512-778 |
| Cow position: | chr23:28108614-28108881 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 196 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 78, 63 |
| Conread position: | 528-778 |
| Cow position: | chr23:21243795-21243534 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 551-780 |
| Cow position: | chr23:4360998-4361230 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 55, 201 |
| Conread position: | 552-778 |
| Cow position: | chr23:22167646-22167876 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 180 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 39, 63 |
| Conread position: | 563-780 |
| Cow position: | chr23:14923313-14923092 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 563-780 |
| Cow position: | chr23:41142239-41142023 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 52, 10 |
| Conread position: | 575-780 |
| Cow position: | chr23:30237266-30237475 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 579-778 |
| Cow position: | chr23:14972968-14972770 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 155 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 579-780 |
| Cow position: | chr23:14777955-14777752 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 32, 95 |
| Conread position: | 604-780 |
| Cow position: | chr23:28218447-28218627 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 612-774 |
| Cow position: | chr23:780979-780817 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 632-780 |
| Cow position: | chr23:2440488-2440340 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 82, 39 |
| Conread position: | 648-778 |
| Cow position: | chr23:23282304-23282432 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 22, 0 |
Show alignments to all cow chromosomes.