Cow genome map
| Conread name: | Ss1.1-Thy1-THY010066E12.5 |
| Conread position: | 1-231 |
| Cow position: | chr24:6336286-6336506 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 51, 138 |
| Conread position: | 1-380 |
| Cow position: | chr24:38637978-38638349 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 269 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 127, 203 |
| Conread position: | 2-90 |
| Cow position: | chr24:6145865-6145953 (view UCSC Genome Browser custom track) |
| Alignm length: | 89 |
| Alignm identity: | 77 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-128 |
| Cow position: | chr24:16084224-16084098 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-152 |
| Cow position: | chr24:8030582-8030733 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 2-169 |
| Cow position: | chr24:6434669-6434839 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 2-176 |
| Cow position: | chr24:7090734-7090556 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 54, 156 |
| Conread position: | 2-259 |
| Cow position: | chr24:32846154-32846402 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 2-267 |
| Cow position: | chr24:7061825-7062092 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 2-270 |
| Cow position: | chr24:16472332-16472602 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 35 |
| Conread position: | 2-281 |
| Cow position: | chr24:12796777-12796511 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 2-298 |
| Cow position: | chr24:40549304-40549594 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 52 |
| Conread position: | 2-304 |
| Cow position: | chr24:33738909-33738604 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 2-311 |
| Cow position: | chr24:14872527-14872216 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 211 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 55, 121 |
| Conread position: | 2-316 |
| Cow position: | chr24:12130538-12130227 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 211 |
| Conread position: | 2-325 |
| Cow position: | chr24:16648553-16648224 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 94 |
| Conread position: | 2-334 |
| Cow position: | chr24:14754569-14754235 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 2-342 |
| Cow position: | chr24:13188604-13188943 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 233 |
| Conread position: | 2-343 |
| Cow position: | chr24:6646131-6646474 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 2-343 |
| Cow position: | chr24:29305892-29305548 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 2-358 |
| Cow position: | chr24:12484887-12484527 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 323 |
| Conread position: | 2-363 |
| Cow position: | chr24:6084502-6084864 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 237 |
| Conread position: | 2-363 |
| Cow position: | chr24:23505431-23505069 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 168 |
| Conread position: | 2-363 |
| Cow position: | chr24:43814195-43814560 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 63 |
| Conread position: | 2-363 |
| Cow position: | chr24:44017964-44018329 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 291 |
| Conread position: | 2-364 |
| Cow position: | chr24:148181-147813 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 227 |
| Conread position: | 2-364 |
| Cow position: | chr24:1449691-1450041 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 257 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 203, 75 |
| Conread position: | 2-364 |
| Cow position: | chr24:4415092-4414735 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 342, 122 |
| Conread position: | 2-364 |
| Cow position: | chr24:5992798-5992428 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 2-364 |
| Cow position: | chr24:6024672-6024307 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 18 |
| Conread position: | 2-364 |
| Cow position: | chr24:6660064-6659695 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 2-364 |
| Cow position: | chr24:9188300-9187937 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 112 |
| Conread position: | 2-364 |
| Cow position: | chr24:12086637-12087003 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 130 |
| Conread position: | 2-364 |
| Cow position: | chr24:12237670-12238040 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 245 |
| Conread position: | 2-364 |
| Cow position: | chr24:12335338-12334962 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 2-364 |
| Cow position: | chr24:14390122-14389738 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 25 |
| Conread position: | 2-364 |
| Cow position: | chr24:17696540-17696175 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 135 |
| Conread position: | 2-364 |
| Cow position: | chr24:19833823-19834187 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 250 |
| Conread position: | 2-364 |
| Cow position: | chr24:22971524-22971889 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 2-364 |
| Cow position: | chr24:27734924-27735268 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 255 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 48, 34 |
| Conread position: | 2-364 |
| Cow position: | chr24:29187721-29188087 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 183 |
| Conread position: | 2-364 |
| Cow position: | chr24:33933804-33934171 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 2-466 |
| Cow position: | chr24:23185031-23184579 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 30 |
| Conread position: | 4-342 |
| Cow position: | chr24:6669709-6669372 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 53 |
| Conread position: | 6-210 |
| Cow position: | chr24:14333907-14334110 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 123, 24 |
| Conread position: | 9-318 |
| Cow position: | chr24:9091844-9091518 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 235 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 19, 155 |
| Conread position: | 9-335 |
| Cow position: | chr24:14280645-14280337 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 223 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 45, 126 |
| Conread position: | 10-313 |
| Cow position: | chr24:36559316-36559013 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 158 |
| Conread position: | 11-339 |
| Cow position: | chr24:22793616-22793946 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 20-363 |
| Cow position: | chr24:12205854-12205520 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 12 |
| Conread position: | 23-301 |
| Cow position: | chr24:1437245-1436978 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 16, 23 |
| Conread position: | 26-359 |
| Cow position: | chr24:12110236-12109916 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 31 |
| Conread position: | 29-314 |
| Cow position: | chr24:17908358-17908650 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 194 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 28, 229 |
| Conread position: | 37-178 |
| Cow position: | chr24:12569330-12569471 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 89, 51 |
| Conread position: | 49-364 |
| Cow position: | chr24:6059376-6059697 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 89 |
| Conread position: | 50-343 |
| Cow position: | chr24:6328834-6328538 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 188 |
| Conread position: | 50-364 |
| Cow position: | chr24:9544542-9544861 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 66-287 |
| Cow position: | chr24:35870186-35869957 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 48, 214 |
| Conread position: | 68-364 |
| Cow position: | chr24:19702003-19702282 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 277, 59 |
| Conread position: | 70-367 |
| Cow position: | chr24:25926311-25926011 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 58, 100 |
| Conread position: | 80-363 |
| Cow position: | chr24:12700310-12700021 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 97-302 |
| Cow position: | chr24:6145941-6146141 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 113, 24 |
| Conread position: | 103-361 |
| Cow position: | chr24:6065182-6064930 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 242, 27 |
| Conread position: | 116-367 |
| Cow position: | chr24:805591-805340 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 12, 80 |
| Conread position: | 141-363 |
| Cow position: | chr24:8030860-8031086 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 141-364 |
| Cow position: | chr24:11866903-11866677 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 175 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 67, 224 |
| Conread position: | 149-364 |
| Cow position: | chr24:6435055-6435275 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 188-357 |
| Cow position: | chr24:36708978-36709146 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 21, 80 |
| Conread position: | 196-363 |
| Cow position: | chr24:44325981-44326152 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 197-335 |
| Cow position: | chr24:12150665-12150532 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 224-363 |
| Cow position: | chr24:21960297-21960155 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 229-364 |
| Cow position: | chr24:13232911-13233051 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 356-701 |
| Cow position: | chr24:17302630-17302281 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 244 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 59, 68 |
| Conread position: | 356-780 |
| Cow position: | chr24:17371091-17370680 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 22 |
| Conread position: | 357-780 |
| Cow position: | chr24:44018374-44018800 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 328 |
| Conread position: | 360-777 |
| Cow position: | chr24:9091201-9090762 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 8 |
| Conread position: | 365-780 |
| Cow position: | chr24:6064872-6064466 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 286 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 93, 35 |
| Conread position: | 371-780 |
| Cow position: | chr24:1450312-1450713 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 286 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 91, 27 |
| Conread position: | 442-730 |
| Cow position: | chr24:12143384-12143110 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 15, 22 |
| Conread position: | 456-761 |
| Cow position: | chr24:31006460-31006163 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 163, 9 |
| Conread position: | 456-777 |
| Cow position: | chr24:12109738-12109414 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 9 |
| Conread position: | 456-778 |
| Cow position: | chr24:36558805-36558475 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 10 |
| Conread position: | 459-780 |
| Cow position: | chr24:29305352-29305021 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 463-770 |
| Cow position: | chr24:6675589-6675891 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 96, 139 |
| Conread position: | 463-778 |
| Cow position: | chr24:6142065-6142374 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 21 |
| Conread position: | 463-780 |
| Cow position: | chr24:19702458-19702790 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 246 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 90, 65 |
| Conread position: | 464-568 |
| Cow position: | chr24:12484343-12484238 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 87 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 464-587 |
| Cow position: | chr24:29183125-29183248 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 95 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 464-600 |
| Cow position: | chr24:43814738-43814875 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 464-614 |
| Cow position: | chr24:27147685-27147836 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 125, 18 |
| Conread position: | 464-642 |
| Cow position: | chr24:34494183-34494003 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 127, 162 |
| Conread position: | 464-656 |
| Cow position: | chr24:6049520-6049722 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 124, 58 |
| Conread position: | 464-701 |
| Cow position: | chr24:36709339-36709582 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 102, 218 |
| Conread position: | 464-758 |
| Cow position: | chr24:6059870-6060169 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 149 |
| Conread position: | 464-763 |
| Cow position: | chr24:32846677-32846981 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 27, 101 |
| Conread position: | 464-767 |
| Cow position: | chr24:14754646-14754968 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 464-771 |
| Cow position: | chr24:14881625-14881327 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 213 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 123, 15 |
| Conread position: | 464-772 |
| Cow position: | chr24:5888266-5887965 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 94, 80 |
| Conread position: | 464-775 |
| Cow position: | chr24:1490638-1490953 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 90, 215 |
| Conread position: | 464-776 |
| Cow position: | chr24:17696008-17695691 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 464-777 |
| Cow position: | chr24:14871340-14871031 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 93 |
| Conread position: | 464-778 |
| Cow position: | chr24:147635-147319 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 94 |
| Conread position: | 464-778 |
| Cow position: | chr24:4414557-4414243 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 25 |
| Conread position: | 464-778 |
| Cow position: | chr24:6129803-6130117 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 105 |
| Conread position: | 464-778 |
| Cow position: | chr24:6407004-6407325 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 257 |
| Conread position: | 464-778 |
| Cow position: | chr24:9545039-9545345 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 26 |
| Conread position: | 464-778 |
| Cow position: | chr24:12129093-12128772 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 81 |
| Conread position: | 464-778 |
| Cow position: | chr24:12334784-12334466 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 464-778 |
| Cow position: | chr24:13189146-13189477 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 62, 259 |
| Conread position: | 464-778 |
| Cow position: | chr24:19834366-19834687 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 464-778 |
| Cow position: | chr24:22972065-22972383 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 464-778 |
| Cow position: | chr24:29188265-29188583 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 149 |
| Conread position: | 464-780 |
| Cow position: | chr24:5992253-5991933 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 464-780 |
| Cow position: | chr24:6024133-6023813 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 148 |
| Conread position: | 464-780 |
| Cow position: | chr24:6328057-6327736 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 464-780 |
| Cow position: | chr24:6435453-6435775 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 82 |
| Conread position: | 464-780 |
| Cow position: | chr24:6659520-6659204 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 53 |
| Conread position: | 464-780 |
| Cow position: | chr24:8151294-8150994 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 124, 20 |
| Conread position: | 464-780 |
| Cow position: | chr24:9187758-9187450 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 226 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 123, 191 |
| Conread position: | 464-780 |
| Cow position: | chr24:12150339-12150019 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 464-780 |
| Cow position: | chr24:12699842-12699525 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 227 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 70, 200 |
| Conread position: | 464-780 |
| Cow position: | chr24:13044657-13044349 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 210 |
| Conread position: | 464-780 |
| Cow position: | chr24:13233226-13233550 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 464-780 |
| Cow position: | chr24:23504890-23504570 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 464-780 |
| Cow position: | chr24:38638513-38638827 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 142 |
| Conread position: | 464-780 |
| Cow position: | chr24:40656025-40656337 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 44, 136 |
| Conread position: | 465-778 |
| Cow position: | chr24:7089993-7089677 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 76 |
| Conread position: | 465-778 |
| Cow position: | chr24:12087178-12087499 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 150 |
| Conread position: | 465-778 |
| Cow position: | chr24:33934348-33934679 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 465-780 |
| Cow position: | chr24:19324479-19324159 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 146, 0 |
| Conread position: | 466-735 |
| Cow position: | chr24:12205331-12205057 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 86 |
| Conread position: | 467-775 |
| Cow position: | chr24:12238274-12238579 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 70 |
| Conread position: | 469-780 |
| Cow position: | chr24:17321683-17322006 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 301 |
| Conread position: | 470-778 |
| Cow position: | chr24:6332714-6332406 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 249 |
| Conread position: | 473-618 |
| Cow position: | chr24:11866265-11866118 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 486-774 |
| Cow position: | chr24:14389550-14389247 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 48, 252 |
| Conread position: | 492-780 |
| Cow position: | chr24:6085063-6085355 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 120 |
| Conread position: | 503-778 |
| Cow position: | chr24:6337412-6337679 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 48 |
| Conread position: | 503-778 |
| Cow position: | chr24:6668793-6668527 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 44 |
| Conread position: | 504-649 |
| Cow position: | chr24:2636726-2636875 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 508-780 |
| Cow position: | chr24:35841051-35840770 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 511-772 |
| Cow position: | chr24:29408681-29408420 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 86, 130 |
| Conread position: | 514-778 |
| Cow position: | chr24:37320561-37320301 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 71 |
| Conread position: | 517-780 |
| Cow position: | chr24:35869528-35869268 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 161 |
| Conread position: | 518-761 |
| Cow position: | chr24:25467597-25467356 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 72, 154 |
| Conread position: | 518-773 |
| Cow position: | chr24:6353185-6353430 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 193 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 534-769 |
| Cow position: | chr24:43810000-43810234 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 83, 54 |
| Conread position: | 534-775 |
| Cow position: | chr24:17409522-17409767 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 54, 119 |
| Conread position: | 562-780 |
| Cow position: | chr24:30430685-30430907 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 578-780 |
| Cow position: | chr24:7062632-7062834 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 580-776 |
| Cow position: | chr24:13179925-13179727 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 38, 5 |
| Conread position: | 584-778 |
| Cow position: | chr24:14383541-14383343 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 25, 89 |
| Conread position: | 590-778 |
| Cow position: | chr24:16083928-16083736 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 614-778 |
| Cow position: | chr24:12163068-12163235 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 638-780 |
| Cow position: | chr24:11152087-11151945 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.