Cow genome map

Conread name: Ss1.1-Thy1-THY010066E12.5

Conread position: 1-150
Cow position:
Alignm length: 152
Alignm identity: 114
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 93, 0

Conread position: 2-96
Cow position:
Alignm length: 95
Alignm identity: 83
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 2-152
Cow position:
Alignm length: 154
Alignm identity: 120
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 36, 0

Conread position: 2-167
Cow position:
Alignm length: 167
Alignm identity: 133
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 131, 73

Conread position: 2-194
Cow position:
Alignm length: 195
Alignm identity: 153
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 110, 172

Conread position: 2-216
Cow position:
Alignm length: 217
Alignm identity: 168
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 125, 98

Conread position: 2-221
Cow position:
Alignm length: 222
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 0

Conread position: 2-242
Cow position:
Alignm length: 243
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 30

Conread position: 2-286
Cow position:
Alignm length: 287
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 25

Conread position: 2-306
Cow position:
Alignm length: 307
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 296

Conread position: 2-328
Cow position:
Alignm length: 331
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 21

Conread position: 2-340
Cow position:
Alignm length: 341
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 0

Conread position: 2-343
Cow position:
Alignm length: 344
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 269

Conread position: 2-358
Cow position:
Alignm length: 362
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 17

Conread position: 2-361
Cow position:
Alignm length: 361
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 61

Conread position: 2-362
Cow position:
Alignm length: 368
Alignm identity: 245
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 124, 239

Conread position: 2-364
Cow position:
Alignm length: 368
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 0

Conread position: 2-364
Cow position:
Alignm length: 367
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 0

Conread position: 2-364
Cow position:
Alignm length: 368
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 53

Conread position: 2-364
Cow position:
Alignm length: 370
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 0

Conread position: 2-364
Cow position:
Alignm length: 368
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 32

Conread position: 2-364
Cow position:
Alignm length: 365
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 30

Conread position: 2-364
Cow position:
Alignm length: 368
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 222

Conread position: 2-364
Cow position:
Alignm length: 372
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 0

Conread position: 2-364
Cow position:
Alignm length: 373
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 122

Conread position: 2-364
Cow position:
Alignm length: 367
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 24

Conread position: 2-364
Cow position:
Alignm length: 372
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 88

Conread position: 2-364
Cow position:
Alignm length: 368
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 224

Conread position: 2-364
Cow position:
Alignm length: 369
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 54

Conread position: 2-364
Cow position:
Alignm length: 367
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 188

Conread position: 2-364
Cow position:
Alignm length: 370
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 30

Conread position: 2-364
Cow position:
Alignm length: 367
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 20

Conread position: 2-364
Cow position:
Alignm length: 368
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 217

Conread position: 2-364
Cow position:
Alignm length: 368
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 217

Conread position: 2-364
Cow position:
Alignm length: 369
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 134

Conread position: 2-364
Cow position:
Alignm length: 368
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 69

Conread position: 2-364
Cow position:
Alignm length: 367
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 67

Conread position: 2-364
Cow position:
Alignm length: 367
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 82

Conread position: 2-364
Cow position:
Alignm length: 367
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 211

Conread position: 2-364
Cow position:
Alignm length: 370
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 2-364
Cow position:
Alignm length: 387
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 30

Conread position: 2-364
Cow position:
Alignm length: 365
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 297

Conread position: 2-364
Cow position:
Alignm length: 371
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 117

Conread position: 2-364
Cow position:
Alignm length: 368
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 69

Conread position: 2-364
Cow position:
Alignm length: 370
Alignm identity: 247
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 128, 66

Conread position: 2-369
Cow position:
Alignm length: 378
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 54

Conread position: 2-372
Cow position:
Alignm length: 376
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 368

Conread position: 2-434
Cow position:
Alignm length: 434
Alignm identity: 163
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 0

Conread position: 3-321
Cow position:
Alignm length: 321
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 109

Conread position: 3-363
Cow position:
Alignm length: 366
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 286

Conread position: 4-277
Cow position:
Alignm length: 278
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 0

Conread position: 4-364
Cow position:
Alignm length: 365
Alignm identity: 242
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 58, 148

Conread position: 12-168
Cow position:
Alignm length: 158
Alignm identity: 124
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 121, 0

Conread position: 23-364
Cow position:
Alignm length: 345
Alignm identity: 240
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 34, 106

Conread position: 41-343
Cow position:
Alignm length: 305
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 130

Conread position: 43-287
Cow position:
Alignm length: 246
Alignm identity: 178
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 119, 16

Conread position: 51-224
Cow position:
Alignm length: 178
Alignm identity: 127
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 19, 88

Conread position: 57-295
Cow position:
Alignm length: 242
Alignm identity: 161
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 41, 52

Conread position: 70-365
Cow position:
Alignm length: 301
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 99-364
Cow position:
Alignm length: 270
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 28

Conread position: 107-328
Cow position:
Alignm length: 224
Alignm identity: 164
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 22, 105

Conread position: 110-466
Cow position:
Alignm length: 378
Alignm identity: 259
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 17, 90

Conread position: 111-364
Cow position:
Alignm length: 259
Alignm identity: 173
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 19, 142

Conread position: 117-309
Cow position:
Alignm length: 197
Alignm identity: 142
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 45, 19

Conread position: 118-379
Cow position:
Alignm length: 266
Alignm identity: 187
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 12, 37

Conread position: 171-361
Cow position:
Alignm length: 196
Alignm identity: 151
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 35, 7

Conread position: 196-364
Cow position:
Alignm length: 172
Alignm identity: 125
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 149, 23

Conread position: 198-364
Cow position:
Alignm length: 170
Alignm identity: 132
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 145, 35

Conread position: 208-364
Cow position:
Alignm length: 161
Alignm identity: 123
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 11, 58

Conread position: 218-358
Cow position:
Alignm length: 144
Alignm identity: 121
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 127, 0

Conread position: 319-778
Cow position:
Alignm length: 479
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 22

Conread position: 355-777
Cow position:
Alignm length: 444
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 355-779
Cow position:
Alignm length: 439
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 237

Conread position: 356-778
Cow position:
Alignm length: 441
Alignm identity: 302
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 39, 118

Conread position: 357-780
Cow position:
Alignm length: 430
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 63

Conread position: 360-778
Cow position:
Alignm length: 440
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 0

Conread position: 447-718
Cow position:
Alignm length: 284
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 7

Conread position: 447-778
Cow position:
Alignm length: 336
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 0

Conread position: 455-778
Cow position:
Alignm length: 329
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 10

Conread position: 456-777
Cow position:
Alignm length: 339
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 255

Conread position: 456-778
Cow position:
Alignm length: 327
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 10

Conread position: 458-731
Cow position:
Alignm length: 284
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 267

Conread position: 459-621
Cow position:
Alignm length: 168
Alignm identity: 127
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 6, 46

Conread position: 459-777
Cow position:
Alignm length: 324
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 22

Conread position: 459-780
Cow position:
Alignm length: 327
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 6

Conread position: 459-780
Cow position:
Alignm length: 327
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 0

Conread position: 463-766
Cow position:
Alignm length: 307
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 258

Conread position: 463-780
Cow position:
Alignm length: 319
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 89

Conread position: 464-554
Cow position:
Alignm length: 91
Alignm identity: 78
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 464-595
Cow position:
Alignm length: 132
Alignm identity: 99
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 464-709
Cow position:
Alignm length: 249
Alignm identity: 178
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 27, 138

Conread position: 464-732
Cow position:
Alignm length: 273
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 131

Conread position: 464-732
Cow position:
Alignm length: 274
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 220

Conread position: 464-768
Cow position:
Alignm length: 313
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 94

Conread position: 464-772
Cow position:
Alignm length: 311
Alignm identity: 205
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 150, 80

Conread position: 464-774
Cow position:
Alignm length: 313
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 139

Conread position: 464-775
Cow position:
Alignm length: 318
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 464-775
Cow position:
Alignm length: 315
Alignm identity: 210
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 123, 84

Conread position: 464-777
Cow position:
Alignm length: 320
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 203

Conread position: 464-777
Cow position:
Alignm length: 318
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 44

Conread position: 464-777
Cow position:
Alignm length: 318
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 464-778
Cow position:
Alignm length: 315
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 0

Conread position: 464-778
Cow position:
Alignm length: 319
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 36

Conread position: 464-778
Cow position:
Alignm length: 319
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 0

Conread position: 464-778
Cow position:
Alignm length: 320
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 256

Conread position: 464-778
Cow position:
Alignm length: 319
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 0

Conread position: 464-778
Cow position:
Alignm length: 318
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 149

Conread position: 464-778
Cow position:
Alignm length: 320
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 149

Conread position: 464-778
Cow position:
Alignm length: 330
Alignm identity: 236
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 44, 124

Conread position: 464-778
Cow position:
Alignm length: 321
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 257

Conread position: 464-778
Cow position:
Alignm length: 319
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 137

Conread position: 464-778
Cow position:
Alignm length: 327
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 464-778
Cow position:
Alignm length: 318
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 140

Conread position: 464-778
Cow position:
Alignm length: 319
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 58

Conread position: 464-778
Cow position:
Alignm length: 326
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 219

Conread position: 464-778
Cow position:
Alignm length: 320
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 256

Conread position: 464-778
Cow position:
Alignm length: 319
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 464-778
Cow position:
Alignm length: 320
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 0

Conread position: 464-778
Cow position:
Alignm length: 319
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 79

Conread position: 464-779
Cow position:
Alignm length: 322
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 306

Conread position: 464-780
Cow position:
Alignm length: 321
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 64

Conread position: 464-780
Cow position:
Alignm length: 326
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 0

Conread position: 464-780
Cow position:
Alignm length: 324
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 142

Conread position: 465-778
Cow position:
Alignm length: 327
Alignm identity: 230
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 84, 155

Conread position: 466-587
Cow position:
Alignm length: 123
Alignm identity: 99
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 61, 0

Conread position: 466-766
Cow position:
Alignm length: 307
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 0

Conread position: 466-778
Cow position:
Alignm length: 319
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 30

Conread position: 468-780
Cow position:
Alignm length: 323
Alignm identity: 209
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 89, 32

Conread position: 469-780
Cow position:
Alignm length: 325
Alignm identity: 227
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 25, 224

Conread position: 473-695
Cow position:
Alignm length: 227
Alignm identity: 160
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 118, 54

Conread position: 473-741
Cow position:
Alignm length: 272
Alignm identity: 184
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 122, 241

Conread position: 477-780
Cow position:
Alignm length: 309
Alignm identity: 221
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 116, 135

Conread position: 486-778
Cow position:
Alignm length: 299
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 72

Conread position: 487-770
Cow position:
Alignm length: 287
Alignm identity: 194
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 103, 124

Conread position: 492-765
Cow position:
Alignm length: 277
Alignm identity: 193
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 96, 181

Conread position: 495-778
Cow position:
Alignm length: 289
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 65

Conread position: 503-775
Cow position:
Alignm length: 277
Alignm identity: 192
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 80, 49

Conread position: 504-778
Cow position:
Alignm length: 284
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 150

Conread position: 506-778
Cow position:
Alignm length: 278
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 116

Conread position: 518-780
Cow position:
Alignm length: 267
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 0

Conread position: 524-656
Cow position:
Alignm length: 138
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 544-780
Cow position:
Alignm length: 247
Alignm identity: 173
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 45, 195

Conread position: 568-779
Cow position:
Alignm length: 222
Alignm identity: 164
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 50, 28

Conread position: 579-779
Cow position:
Alignm length: 202
Alignm identity: 148
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 19, 24

Conread position: 586-777
Cow position:
Alignm length: 192
Alignm identity: 135
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 586-778
Cow position:
Alignm length: 194
Alignm identity: 153
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 23, 12

Conread position: 586-780
Cow position:
Alignm length: 197
Alignm identity: 141
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 29, 0

Conread position: 592-779
Cow position:
Alignm length: 199
Alignm identity: 146
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 19, 110

Conread position: 611-779
Cow position:
Alignm length: 172
Alignm identity: 132
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 96, 35

Conread position: 620-768
Cow position:
Alignm length: 150
Alignm identity: 111
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 66, 34

Conread position: 644-778
Cow position:
Alignm length: 135
Alignm identity: 108
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.