Cow genome map
| Conread name: | Ss1.1-Thy1-THY010066E12.5 |
| Conread position: | 1-150 |
| Cow position: | chr28:10617436-10617285 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-96 |
| Cow position: | chr28:14705275-14705181 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 83 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-152 |
| Cow position: | chr28:24588479-24588632 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 2-167 |
| Cow position: | chr28:7882002-7881837 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 131, 73 |
| Conread position: | 2-194 |
| Cow position: | chr28:29820130-29820322 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 110, 172 |
| Conread position: | 2-216 |
| Cow position: | chr28:3020354-3020142 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 168 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 125, 98 |
| Conread position: | 2-221 |
| Cow position: | chr28:8720902-8720681 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 2-242 |
| Cow position: | chr28:2083990-2084227 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 30 |
| Conread position: | 2-286 |
| Cow position: | chr28:34594375-34594660 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 25 |
| Conread position: | 2-306 |
| Cow position: | chr28:5813405-5813709 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 296 |
| Conread position: | 2-328 |
| Cow position: | chr28:5798142-5798463 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 21 |
| Conread position: | 2-340 |
| Cow position: | chr28:7822647-7822987 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 2-343 |
| Cow position: | chr28:22233010-22232670 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 269 |
| Conread position: | 2-358 |
| Cow position: | chr28:14750936-14751293 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 17 |
| Conread position: | 2-361 |
| Cow position: | chr28:10497619-10497278 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 61 |
| Conread position: | 2-362 |
| Cow position: | chr28:26489697-26490060 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 124, 239 |
| Conread position: | 2-364 |
| Cow position: | chr28:1167486-1167119 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 2-364 |
| Cow position: | chr28:1505261-1505627 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 2-364 |
| Cow position: | chr28:1814471-1814106 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 53 |
| Conread position: | 2-364 |
| Cow position: | chr28:1953519-1953888 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 2-364 |
| Cow position: | chr28:2988845-2988480 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 32 |
| Conread position: | 2-364 |
| Cow position: | chr28:3191850-3191496 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 30 |
| Conread position: | 2-364 |
| Cow position: | chr28:5113902-5113538 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 222 |
| Conread position: | 2-364 |
| Cow position: | chr28:5566541-5566912 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 2-364 |
| Cow position: | chr28:5751309-5750940 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 122 |
| Conread position: | 2-364 |
| Cow position: | chr28:5765158-5765511 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 24 |
| Conread position: | 2-364 |
| Cow position: | chr28:5937872-5938242 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 88 |
| Conread position: | 2-364 |
| Cow position: | chr28:6779947-6779581 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 224 |
| Conread position: | 2-364 |
| Cow position: | chr28:7002386-7002753 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 54 |
| Conread position: | 2-364 |
| Cow position: | chr28:7740875-7741229 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 188 |
| Conread position: | 2-364 |
| Cow position: | chr28:7789555-7789189 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 30 |
| Conread position: | 2-364 |
| Cow position: | chr28:10071680-10072033 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 20 |
| Conread position: | 2-364 |
| Cow position: | chr28:12150699-12151063 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 217 |
| Conread position: | 2-364 |
| Cow position: | chr28:12409832-12409468 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 217 |
| Conread position: | 2-364 |
| Cow position: | chr28:13460365-13460731 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 134 |
| Conread position: | 2-364 |
| Cow position: | chr28:17388879-17389240 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 69 |
| Conread position: | 2-364 |
| Cow position: | chr28:17666902-17666544 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 67 |
| Conread position: | 2-364 |
| Cow position: | chr28:18520050-18519688 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 82 |
| Conread position: | 2-364 |
| Cow position: | chr28:22260755-22260394 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 211 |
| Conread position: | 2-364 |
| Cow position: | chr28:24589241-24589610 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 2-364 |
| Cow position: | chr28:24668006-24668376 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 30 |
| Conread position: | 2-364 |
| Cow position: | chr28:26425855-26425498 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 297 |
| Conread position: | 2-364 |
| Cow position: | chr28:32791984-32791617 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 117 |
| Conread position: | 2-364 |
| Cow position: | chr28:33252708-33253061 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 69 |
| Conread position: | 2-364 |
| Cow position: | chr28:33259037-33259396 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 247 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 128, 66 |
| Conread position: | 2-369 |
| Cow position: | chr28:1387008-1386637 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 54 |
| Conread position: | 2-372 |
| Cow position: | chr28:2724533-2724159 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 368 |
| Conread position: | 2-434 |
| Cow position: | chr28:485173-484740 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 163 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 3-321 |
| Cow position: | chr28:782790-783108 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 109 |
| Conread position: | 3-363 |
| Cow position: | chr28:6538871-6538507 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 286 |
| Conread position: | 4-277 |
| Cow position: | chr28:10581587-10581310 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 4-364 |
| Cow position: | chr28:14195295-14194933 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 242 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 58, 148 |
| Conread position: | 12-168 |
| Cow position: | chr28:7880928-7881085 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 23-364 |
| Cow position: | chr28:10646975-10646643 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 240 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 34, 106 |
| Conread position: | 41-343 |
| Cow position: | chr28:8379268-8379571 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 130 |
| Conread position: | 43-287 |
| Cow position: | chr28:7810937-7811165 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 119, 16 |
| Conread position: | 51-224 |
| Cow position: | chr28:6656070-6655895 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 19, 88 |
| Conread position: | 57-295 |
| Cow position: | chr28:24304559-24304322 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 41, 52 |
| Conread position: | 70-365 |
| Cow position: | chr28:21359939-21360239 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 99-364 |
| Cow position: | chr28:14704897-14704630 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 28 |
| Conread position: | 107-328 |
| Cow position: | chr28:10617291-10617074 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 22, 105 |
| Conread position: | 110-466 |
| Cow position: | chr28:15683789-15684149 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 259 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 17, 90 |
| Conread position: | 111-364 |
| Cow position: | chr28:25169571-25169316 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 19, 142 |
| Conread position: | 117-309 |
| Cow position: | chr28:26752359-26752551 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 45, 19 |
| Conread position: | 118-379 |
| Cow position: | chr28:18147240-18146982 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 12, 37 |
| Conread position: | 171-361 |
| Cow position: | chr28:29820567-29820760 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 35, 7 |
| Conread position: | 196-364 |
| Cow position: | chr28:15035504-15035339 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 149, 23 |
| Conread position: | 198-364 |
| Cow position: | chr28:7881853-7881688 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 145, 35 |
| Conread position: | 208-364 |
| Cow position: | chr28:8720348-8720193 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 11, 58 |
| Conread position: | 218-358 |
| Cow position: | chr28:17732448-17732305 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 319-778 |
| Cow position: | chr28:15035335-15034870 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 22 |
| Conread position: | 355-777 |
| Cow position: | chr28:29820805-29821248 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 355-779 |
| Cow position: | chr28:10646600-10646172 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 237 |
| Conread position: | 356-778 |
| Cow position: | chr28:5814189-5814610 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 302 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 39, 118 |
| Conread position: | 357-780 |
| Cow position: | chr28:1954183-1954609 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 63 |
| Conread position: | 360-778 |
| Cow position: | chr28:24668424-24668863 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 447-718 |
| Cow position: | chr28:15684156-15684438 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 7 |
| Conread position: | 447-778 |
| Cow position: | chr28:14704469-14704134 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 455-778 |
| Cow position: | chr28:7002923-7003249 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 10 |
| Conread position: | 456-777 |
| Cow position: | chr28:21360412-21360744 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 255 |
| Conread position: | 456-778 |
| Cow position: | chr28:5799226-5799546 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 10 |
| Conread position: | 458-731 |
| Cow position: | chr28:1217227-1216947 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 267 |
| Conread position: | 459-621 |
| Cow position: | chr28:2723994-2723828 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 6, 46 |
| Conread position: | 459-777 |
| Cow position: | chr28:6538334-6538012 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 22 |
| Conread position: | 459-780 |
| Cow position: | chr28:484665-484340 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 6 |
| Conread position: | 459-780 |
| Cow position: | chr28:14751473-14751799 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 463-766 |
| Cow position: | chr28:2988149-2987846 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 258 |
| Conread position: | 463-780 |
| Cow position: | chr28:18146795-18146483 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 89 |
| Conread position: | 464-554 |
| Cow position: | chr28:7823476-7823566 (view UCSC Genome Browser custom track) |
| Alignm length: | 91 |
| Alignm identity: | 78 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 464-595 |
| Cow position: | chr28:6779403-6779272 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 464-709 |
| Cow position: | chr28:13603896-13603649 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 27, 138 |
| Conread position: | 464-732 |
| Cow position: | chr28:5113361-5113090 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 131 |
| Conread position: | 464-732 |
| Cow position: | chr28:8720011-8719739 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 220 |
| Conread position: | 464-768 |
| Cow position: | chr28:6231837-6231529 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 94 |
| Conread position: | 464-772 |
| Cow position: | chr28:12180139-12179839 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 205 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 150, 80 |
| Conread position: | 464-774 |
| Cow position: | chr28:7811384-7811687 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 139 |
| Conread position: | 464-775 |
| Cow position: | chr28:5802973-5803290 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 464-775 |
| Cow position: | chr28:28439751-28440062 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 210 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 123, 84 |
| Conread position: | 464-777 |
| Cow position: | chr28:1386463-1386146 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 203 |
| Conread position: | 464-777 |
| Cow position: | chr28:10460669-10460357 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 44 |
| Conread position: | 464-777 |
| Cow position: | chr28:17666371-17666054 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 464-778 |
| Cow position: | chr28:783608-783910 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 464-778 |
| Cow position: | chr28:1166941-1166626 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 36 |
| Conread position: | 464-778 |
| Cow position: | chr28:1505802-1506120 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 464-778 |
| Cow position: | chr28:1813928-1813612 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 256 |
| Conread position: | 464-778 |
| Cow position: | chr28:3191320-3191002 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 464-778 |
| Cow position: | chr28:5567090-5567390 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 149 |
| Conread position: | 464-778 |
| Cow position: | chr28:5750772-5750454 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 149 |
| Conread position: | 464-778 |
| Cow position: | chr28:5765677-5765985 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 236 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 44, 124 |
| Conread position: | 464-778 |
| Cow position: | chr28:5938420-5938737 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 257 |
| Conread position: | 464-778 |
| Cow position: | chr28:7741383-7741695 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 137 |
| Conread position: | 464-778 |
| Cow position: | chr28:8379991-8380317 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 464-778 |
| Cow position: | chr28:10072210-10072526 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 140 |
| Conread position: | 464-778 |
| Cow position: | chr28:12409298-12408984 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 58 |
| Conread position: | 464-778 |
| Cow position: | chr28:13460909-13461229 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 219 |
| Conread position: | 464-778 |
| Cow position: | chr28:18519514-18519198 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 256 |
| Conread position: | 464-778 |
| Cow position: | chr28:22260216-22259898 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 464-778 |
| Cow position: | chr28:26425320-26425001 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 464-778 |
| Cow position: | chr28:32791440-32791128 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 79 |
| Conread position: | 464-779 |
| Cow position: | chr28:29760995-29760675 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 306 |
| Conread position: | 464-780 |
| Cow position: | chr28:9179562-9179868 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 64 |
| Conread position: | 464-780 |
| Cow position: | chr28:24589787-24590112 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 464-780 |
| Cow position: | chr28:24884040-24883730 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 142 |
| Conread position: | 465-778 |
| Cow position: | chr28:33253240-33253559 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 84, 155 |
| Conread position: | 466-587 |
| Cow position: | chr28:22232484-22232362 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 466-766 |
| Cow position: | chr28:10581153-10580847 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 466-778 |
| Cow position: | chr28:12151243-12151560 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 30 |
| Conread position: | 468-780 |
| Cow position: | chr28:15587031-15587343 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 209 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 89, 32 |
| Conread position: | 469-780 |
| Cow position: | chr28:14233000-14232677 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 227 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 25, 224 |
| Conread position: | 473-695 |
| Cow position: | chr28:10873154-10873371 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 118, 54 |
| Conread position: | 473-741 |
| Cow position: | chr28:27678494-27678759 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 122, 241 |
| Conread position: | 477-780 |
| Cow position: | chr28:22042327-22042032 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 221 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 116, 135 |
| Conread position: | 486-778 |
| Cow position: | chr28:10470465-10470758 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 72 |
| Conread position: | 487-770 |
| Cow position: | chr28:14194568-14194293 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 103, 124 |
| Conread position: | 492-765 |
| Cow position: | chr28:6457360-6457096 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 193 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 96, 181 |
| Conread position: | 495-778 |
| Cow position: | chr28:7788927-7788645 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 65 |
| Conread position: | 503-775 |
| Cow position: | chr28:7028801-7028538 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 192 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 80, 49 |
| Conread position: | 504-778 |
| Cow position: | chr28:10496558-10496279 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 150 |
| Conread position: | 506-778 |
| Cow position: | chr28:13374260-13374002 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 116 |
| Conread position: | 518-780 |
| Cow position: | chr28:7027268-7027002 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 524-656 |
| Cow position: | chr28:11025898-11025761 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 544-780 |
| Cow position: | chr28:7826996-7827241 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 45, 195 |
| Conread position: | 568-779 |
| Cow position: | chr28:17381815-17381604 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 50, 28 |
| Conread position: | 579-779 |
| Cow position: | chr28:22232224-22232024 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 586-777 |
| Cow position: | chr28:15673388-15673572 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 586-778 |
| Cow position: | chr28:2085520-2085712 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 153 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 23, 12 |
| Conread position: | 586-780 |
| Cow position: | chr28:6778882-6778686 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 592-779 |
| Cow position: | chr28:21566517-21566714 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 19, 110 |
| Conread position: | 611-779 |
| Cow position: | chr28:25760589-25760757 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 96, 35 |
| Conread position: | 620-768 |
| Cow position: | chr28:11490161-11490013 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 66, 34 |
| Conread position: | 644-778 |
| Cow position: | chr28:17389520-17389654 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.