Cow genome map
| Conread name: | Ss1.1-Thy1-THY010069H10.5 |
| Conread position: | 2-198 |
| Cow position: | chr13:19128022-19128226 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 35, 177 |
| Conread position: | 452-745 |
| Cow position: | chr13:24744818-24745103 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 104, 54 |
| Conread position: | 614-827 |
| Cow position: | chr13:19123718-19123932 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 47, 12 |
| Conread position: | 617-828 |
| Cow position: | chr13:1049027-1049235 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 44, 20 |
| Conread position: | 619-820 |
| Cow position: | chr13:16816389-16816186 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 32, 150 |
| Conread position: | 628-826 |
| Cow position: | chr13:32546674-32546473 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 29, 9 |
| Conread position: | 637-828 |
| Cow position: | chr13:11739197-11739000 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 24, 79 |
| Conread position: | 654-826 |
| Cow position: | chr13:17998813-17998640 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 135, 33 |
| Conread position: | 656-826 |
| Cow position: | chr13:4942644-4942466 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 656-826 |
| Cow position: | chr13:11246897-11247073 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 40, 165 |
| Conread position: | 656-826 |
| Cow position: | chr13:14401849-14402017 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 36, 100 |
| Conread position: | 656-826 |
| Cow position: | chr13:15923120-15923298 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 656-826 |
| Cow position: | chr13:21697523-21697345 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 656-826 |
| Cow position: | chr13:28860423-28860246 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 656-826 |
| Cow position: | chr13:31611049-31611227 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 39, 164 |
| Conread position: | 656-826 |
| Cow position: | chr13:60468685-60468507 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 656-828 |
| Cow position: | chr13:6666880-6667054 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 656-828 |
| Cow position: | chr13:8796554-8796728 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 109, 54 |
| Conread position: | 656-828 |
| Cow position: | chr13:13901126-13900947 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 656-828 |
| Cow position: | chr13:34041075-34041255 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 39, 115 |
| Conread position: | 657-826 |
| Cow position: | chr13:34343164-34342987 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 669-826 |
| Cow position: | chr13:15519280-15519444 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 671-826 |
| Cow position: | chr13:30654157-30654313 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 96, 26 |
| Conread position: | 680-826 |
| Cow position: | chr13:30239544-30239399 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 681-827 |
| Cow position: | chr13:16253288-16253437 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 76, 0 |
Show alignments to all cow chromosomes.