Cow genome map
| Conread name: | Ss1.1-Thy1-THY010069H10.5 |
| Conread position: | 607-826 |
| Cow position: | chr15:15345923-15346153 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 78, 26 |
| Conread position: | 629-824 |
| Cow position: | chr15:20915600-20915798 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 28, 59 |
| Conread position: | 651-826 |
| Cow position: | chr15:24216738-24216920 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 34, 10 |
| Conread position: | 653-825 |
| Cow position: | chr15:21965121-21964946 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 41, 140 |
| Conread position: | 653-826 |
| Cow position: | chr15:6590980-6591159 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 654-828 |
| Cow position: | chr15:17149254-17149083 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 18, 113 |
| Conread position: | 656-791 |
| Cow position: | chr15:41956948-41956810 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 44, 60 |
| Conread position: | 656-809 |
| Cow position: | chr15:13075138-13074983 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 36, 108 |
| Conread position: | 656-817 |
| Cow position: | chr15:5010499-5010668 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 656-825 |
| Cow position: | chr15:51218853-51218679 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 656-826 |
| Cow position: | chr15:4679398-4679219 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 656-826 |
| Cow position: | chr15:6154794-6154973 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 39, 138 |
| Conread position: | 656-826 |
| Cow position: | chr15:6485711-6485538 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 38, 109 |
| Conread position: | 656-826 |
| Cow position: | chr15:8100593-8100429 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 656-826 |
| Cow position: | chr15:18577845-18577672 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 656-826 |
| Cow position: | chr15:19736923-19737101 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 656-826 |
| Cow position: | chr15:20411730-20411554 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 29, 135 |
| Conread position: | 656-826 |
| Cow position: | chr15:21664607-21664783 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 38, 135 |
| Conread position: | 656-826 |
| Cow position: | chr15:24718459-24718292 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 23, 89 |
| Conread position: | 656-826 |
| Cow position: | chr15:25653934-25654112 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 656-826 |
| Cow position: | chr15:31359999-31359831 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 40, 114 |
| Conread position: | 656-828 |
| Cow position: | chr15:18331701-18331880 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 27, 82 |
| Conread position: | 656-828 |
| Cow position: | chr15:34366556-34366727 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 38, 61 |
| Conread position: | 660-827 |
| Cow position: | chr15:50253957-50253785 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 671-826 |
| Cow position: | chr15:4386869-4386711 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 25, 145 |
| Conread position: | 676-826 |
| Cow position: | chr15:20360984-20361135 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 85, 23 |
| Conread position: | 680-826 |
| Cow position: | chr15:31860106-31860254 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 680-828 |
| Cow position: | chr15:523719-523868 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 81, 91 |
Show alignments to all cow chromosomes.