Cow genome map
| Conread name: | Ss1.1-Thy1-THY010069H10.5 |
| Conread position: | 451-562 |
| Cow position: | chr16:32779004-32779113 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 93 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 455-562 |
| Cow position: | chr16:46628925-46628818 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 87 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 607-785 |
| Cow position: | chr16:27299304-27299489 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 49, 19 |
| Conread position: | 619-828 |
| Cow position: | chr16:10568475-10568264 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 42, 139 |
| Conread position: | 653-824 |
| Cow position: | chr16:1432982-1432804 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 653-825 |
| Cow position: | chr16:29047815-29047638 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 40, 13 |
| Conread position: | 654-825 |
| Cow position: | chr16:52590884-52591062 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 654-826 |
| Cow position: | chr16:38024117-38023935 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 655-826 |
| Cow position: | chr16:19778858-19779036 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 28, 120 |
| Conread position: | 656-817 |
| Cow position: | chr16:37481640-37481804 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 656-824 |
| Cow position: | chr16:27732592-27732768 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 16, 10 |
| Conread position: | 656-825 |
| Cow position: | chr16:32937312-32937135 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 656-826 |
| Cow position: | chr16:406247-406425 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 656-826 |
| Cow position: | chr16:3330725-3330551 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 656-826 |
| Cow position: | chr16:5890790-5890608 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 656-826 |
| Cow position: | chr16:19080760-19080582 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 656-826 |
| Cow position: | chr16:19149810-19149974 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 40, 25 |
| Conread position: | 656-826 |
| Cow position: | chr16:23671492-23671317 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 38, 13 |
| Conread position: | 656-826 |
| Cow position: | chr16:27594297-27594119 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 656-826 |
| Cow position: | chr16:40295371-40295548 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 39, 157 |
| Conread position: | 656-826 |
| Cow position: | chr16:40557155-40557324 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 38, 102 |
| Conread position: | 656-828 |
| Cow position: | chr16:2726423-2726602 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 39, 99 |
| Conread position: | 656-828 |
| Cow position: | chr16:16229110-16228934 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 39, 115 |
| Conread position: | 656-828 |
| Cow position: | chr16:25442419-25442241 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 657-828 |
| Cow position: | chr16:2482346-2482523 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 29, 80 |
| Conread position: | 671-828 |
| Cow position: | chr16:1566684-1566838 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 672-826 |
| Cow position: | chr16:28158327-28158170 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 678-826 |
| Cow position: | chr16:15185840-15185690 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 678-826 |
| Cow position: | chr16:23251661-23251813 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 678-828 |
| Cow position: | chr16:838079-837928 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 110, 9 |
Show alignments to all cow chromosomes.