Cow genome map
| Conread name: | Ss1.1-Thy1-THY010069H10.5 |
| Conread position: | 451-562 |
| Cow position: | chr18:48469452-48469563 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 88 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 607-773 |
| Cow position: | chr18:2645908-2646072 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 61, 19 |
| Conread position: | 618-827 |
| Cow position: | chr18:40315829-40316037 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 76, 45 |
| Conread position: | 620-824 |
| Cow position: | chr18:16276374-16276567 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 71, 36 |
| Conread position: | 625-828 |
| Cow position: | chr18:45184889-45184675 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 642-828 |
| Cow position: | chr18:20835238-20835047 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 52, 14 |
| Conread position: | 653-826 |
| Cow position: | chr18:29238467-29238293 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 29, 130 |
| Conread position: | 656-819 |
| Cow position: | chr18:14421850-14421683 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 38, 105 |
| Conread position: | 656-823 |
| Cow position: | chr18:159658-159829 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 36, 161 |
| Conread position: | 656-826 |
| Cow position: | chr18:16089692-16089514 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 656-826 |
| Cow position: | chr18:23799222-23799044 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 656-826 |
| Cow position: | chr18:25352832-25352658 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 656-826 |
| Cow position: | chr18:28972314-28972491 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 656-826 |
| Cow position: | chr18:29865038-29865213 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 40, 51 |
| Conread position: | 656-826 |
| Cow position: | chr18:38342724-38342898 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 656-826 |
| Cow position: | chr18:51482428-51482253 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 656-827 |
| Cow position: | chr18:12992664-12992493 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 105, 98 |
| Conread position: | 656-827 |
| Cow position: | chr18:33300870-33300694 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 33, 146 |
| Conread position: | 656-827 |
| Cow position: | chr18:34044169-34043999 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 8, 17 |
| Conread position: | 656-828 |
| Cow position: | chr18:52652486-52652305 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 657-828 |
| Cow position: | chr18:14131962-14131788 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 659-824 |
| Cow position: | chr18:21096728-21096564 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 33, 103 |
| Conread position: | 662-828 |
| Cow position: | chr18:29406887-29407062 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 21, 0 |
Show alignments to all cow chromosomes.