Cow genome map
| Conread name: | Ss1.1-Thy1-THY010070D09.5 |
| Conread position: | 281-458 |
| Cow position: | chr12:21393373-21393554 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 47, 10 |
| Conread position: | 286-478 |
| Cow position: | chr12:15938592-15938405 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 60, 22 |
| Conread position: | 288-616 |
| Cow position: | chr12:29484214-29483851 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 74, 27 |
| Conread position: | 294-616 |
| Cow position: | chr12:44518058-44517703 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 248 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 17, 256 |
| Conread position: | 311-458 |
| Cow position: | chr12:25320619-25320771 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 314-461 |
| Cow position: | chr12:3880555-3880400 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 322-573 |
| Cow position: | chr12:29411780-29411504 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 330-612 |
| Cow position: | chr12:39465295-39465610 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 224 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 334-456 |
| Cow position: | chr12:39486150-39486280 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 111 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 334-462 |
| Cow position: | chr12:5714349-5714481 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 334-487 |
| Cow position: | chr12:27039047-27038886 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 11, 52 |
| Conread position: | 334-612 |
| Cow position: | chr12:18577570-18577870 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 221 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 334-612 |
| Cow position: | chr12:25561090-25561400 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 15, 217 |
| Conread position: | 334-612 |
| Cow position: | chr12:30919152-30919456 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 223 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 12, 74 |
| Conread position: | 336-583 |
| Cow position: | chr12:15258983-15258722 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 9, 220 |
| Conread position: | 337-456 |
| Cow position: | chr12:8710555-8710673 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 35, 89 |
| Conread position: | 337-456 |
| Cow position: | chr12:30745437-30745563 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 337-609 |
| Cow position: | chr12:3055861-3056160 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 31, 288 |
| Conread position: | 337-609 |
| Cow position: | chr12:18040867-18040580 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 198 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 31, 77 |
| Conread position: | 337-612 |
| Cow position: | chr12:4341996-4341713 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 184 |
| Conread position: | 338-456 |
| Cow position: | chr12:941357-941483 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 338-456 |
| Cow position: | chr12:16359599-16359721 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 338-459 |
| Cow position: | chr12:19039887-19039761 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 30, 57 |
| Conread position: | 338-459 |
| Cow position: | chr12:26869071-26868945 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 30, 14 |
| Conread position: | 338-461 |
| Cow position: | chr12:3950626-3950495 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 338-462 |
| Cow position: | chr12:3076898-3076766 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 338-462 |
| Cow position: | chr12:8487605-8487476 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 338-462 |
| Cow position: | chr12:10461731-10461856 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 338-462 |
| Cow position: | chr12:19154886-19154765 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 30, 67 |
| Conread position: | 338-462 |
| Cow position: | chr12:31925375-31925503 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 338-466 |
| Cow position: | chr12:2711217-2711348 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 30, 129 |
| Conread position: | 338-467 |
| Cow position: | chr12:18937112-18937249 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 338-482 |
| Cow position: | chr12:34466277-34466141 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 31, 68 |
| Conread position: | 338-489 |
| Cow position: | chr12:19125102-19124941 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 25, 108 |
| Conread position: | 338-489 |
| Cow position: | chr12:35136244-35136399 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 338-491 |
| Cow position: | chr12:31060258-31060095 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 33, 156 |
| Conread position: | 338-506 |
| Cow position: | chr12:24755299-24755115 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 338-550 |
| Cow position: | chr12:37123238-37123454 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 27, 41 |
| Conread position: | 338-567 |
| Cow position: | chr12:25455839-25456098 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 338-580 |
| Cow position: | chr12:28572427-28572679 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 338-580 |
| Cow position: | chr12:36954650-36954391 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 30, 248 |
| Conread position: | 338-612 |
| Cow position: | chr12:17881597-17881892 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 219 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 89, 28 |
| Conread position: | 338-616 |
| Cow position: | chr12:23797829-23798134 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 28, 20 |
| Conread position: | 338-616 |
| Cow position: | chr12:26782606-26782906 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 30, 257 |
| Conread position: | 339-455 |
| Cow position: | chr12:42167371-42167494 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 29, 108 |
| Conread position: | 339-456 |
| Cow position: | chr12:18421201-18421076 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 339-459 |
| Cow position: | chr12:37770601-37770726 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 34, 99 |
| Conread position: | 339-460 |
| Cow position: | chr12:4134390-4134521 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 339-461 |
| Cow position: | chr12:23154741-23154612 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 339-461 |
| Cow position: | chr12:30728513-30728383 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 339-461 |
| Cow position: | chr12:32714766-32714896 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 339-463 |
| Cow position: | chr12:41214593-41214468 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 29, 13 |
| Conread position: | 339-493 |
| Cow position: | chr12:33457874-33458026 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 87, 71 |
| Conread position: | 339-550 |
| Cow position: | chr12:44766810-44767038 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 29, 82 |
| Conread position: | 339-571 |
| Cow position: | chr12:22047195-22047453 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 31, 206 |
| Conread position: | 339-572 |
| Cow position: | chr12:10487769-10488000 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 27, 13 |
| Conread position: | 339-583 |
| Cow position: | chr12:40910565-40910294 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 339-610 |
| Cow position: | chr12:27803324-27803021 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 339-612 |
| Cow position: | chr12:22285375-22285091 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 29, 99 |
| Conread position: | 339-612 |
| Cow position: | chr12:26777427-26777160 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 29, 83 |
| Conread position: | 339-612 |
| Cow position: | chr12:30590502-30590798 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 29, 195 |
| Conread position: | 339-612 |
| Cow position: | chr12:42966726-42967026 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 208 |
| Conread position: | 339-612 |
| Cow position: | chr12:44905362-44905658 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 339-616 |
| Cow position: | chr12:20316781-20316496 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 29, 78 |
| Conread position: | 340-561 |
| Cow position: | chr12:17702506-17702253 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 341-456 |
| Cow position: | chr12:48415785-48415670 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 27, 102 |
| Conread position: | 341-612 |
| Cow position: | chr12:12304125-12304411 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 14, 70 |
| Conread position: | 342-453 |
| Cow position: | chr12:3600167-3600052 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 98 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 342-456 |
| Cow position: | chr12:5905786-5905902 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 26, 101 |
| Conread position: | 342-456 |
| Cow position: | chr12:25529759-25529881 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 342-456 |
| Cow position: | chr12:40307425-40307545 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 342-457 |
| Cow position: | chr12:20795636-20795755 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 24, 49 |
| Conread position: | 342-457 |
| Cow position: | chr12:21922164-21922284 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 342-459 |
| Cow position: | chr12:35218676-35218556 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 342-459 |
| Cow position: | chr12:40158511-40158389 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 342-460 |
| Cow position: | chr12:1284729-1284610 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 342-460 |
| Cow position: | chr12:8922060-8921934 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 342-460 |
| Cow position: | chr12:9914518-9914638 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 26, 69 |
| Conread position: | 342-460 |
| Cow position: | chr12:37727876-37727992 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 26, 45 |
| Conread position: | 342-460 |
| Cow position: | chr12:37733048-37732932 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 26, 45 |
| Conread position: | 342-461 |
| Cow position: | chr12:6687599-6687714 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 27, 81 |
| Conread position: | 342-461 |
| Cow position: | chr12:11109498-11109616 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 26, 82 |
| Conread position: | 342-461 |
| Cow position: | chr12:27563108-27562982 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 342-461 |
| Cow position: | chr12:47928944-47929067 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 342-462 |
| Cow position: | chr12:7108917-7109041 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 342-462 |
| Cow position: | chr12:46143550-46143674 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 342-463 |
| Cow position: | chr12:12017605-12017732 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 342-463 |
| Cow position: | chr12:28011170-28011045 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 342-463 |
| Cow position: | chr12:31198497-31198616 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 342-463 |
| Cow position: | chr12:40270357-40270240 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 27, 51 |
| Conread position: | 342-464 |
| Cow position: | chr12:29119628-29119754 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 342-467 |
| Cow position: | chr12:4866543-4866672 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 342-467 |
| Cow position: | chr12:17486408-17486279 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 342-467 |
| Cow position: | chr12:22132249-22132120 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 342-467 |
| Cow position: | chr12:29969304-29969438 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 342-468 |
| Cow position: | chr12:15232017-15232146 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 27, 67 |
| Conread position: | 342-469 |
| Cow position: | chr12:12178650-12178782 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 342-476 |
| Cow position: | chr12:18769345-18769208 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 26, 116 |
| Conread position: | 342-478 |
| Cow position: | chr12:44274118-44273981 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 26, 88 |
| Conread position: | 342-491 |
| Cow position: | chr12:2242156-2242007 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 26, 82 |
| Conread position: | 342-493 |
| Cow position: | chr12:19865972-19866121 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 26, 10 |
| Conread position: | 342-494 |
| Cow position: | chr12:22124741-22124897 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 24, 136 |
| Conread position: | 342-560 |
| Cow position: | chr12:32391574-32391820 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 26, 198 |
| Conread position: | 342-574 |
| Cow position: | chr12:11583133-11583376 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 111, 24 |
| Conread position: | 342-576 |
| Cow position: | chr12:17495463-17495220 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 188 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 27, 177 |
| Conread position: | 342-576 |
| Cow position: | chr12:33297575-33297810 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 24, 37 |
| Conread position: | 342-577 |
| Cow position: | chr12:45160783-45160530 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 181 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 26, 185 |
| Conread position: | 342-581 |
| Cow position: | chr12:18081814-18081578 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 26, 84 |
| Conread position: | 342-582 |
| Cow position: | chr12:3510293-3510555 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 192 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 26, 10 |
| Conread position: | 342-584 |
| Cow position: | chr12:10028625-10028883 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 342-610 |
| Cow position: | chr12:18123415-18123698 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 26, 125 |
| Conread position: | 342-610 |
| Cow position: | chr12:30753457-30753748 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 111, 20 |
| Conread position: | 342-611 |
| Cow position: | chr12:17716812-17717095 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 219 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 26, 70 |
| Conread position: | 342-612 |
| Cow position: | chr12:6410999-6410703 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 226 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 26, 87 |
| Conread position: | 342-612 |
| Cow position: | chr12:8869154-8868851 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 26, 216 |
| Conread position: | 342-612 |
| Cow position: | chr12:9143122-9143418 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 26, 170 |
| Conread position: | 342-612 |
| Cow position: | chr12:14132015-14131739 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 26, 119 |
| Conread position: | 342-612 |
| Cow position: | chr12:18388553-18388258 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 26, 195 |
| Conread position: | 342-612 |
| Cow position: | chr12:20479585-20479307 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 201 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 26, 185 |
| Conread position: | 342-612 |
| Cow position: | chr12:25805381-25805101 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 26, 200 |
| Conread position: | 342-612 |
| Cow position: | chr12:28582763-28582477 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 213 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 26, 143 |
| Conread position: | 342-612 |
| Cow position: | chr12:30170396-30170700 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 342-612 |
| Cow position: | chr12:30605427-30605135 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 211 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 29, 189 |
| Conread position: | 342-612 |
| Cow position: | chr12:34007028-34007332 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 26, 176 |
| Conread position: | 342-612 |
| Cow position: | chr12:40110118-40110402 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 26, 74 |
| Conread position: | 342-613 |
| Cow position: | chr12:6210428-6210126 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 26, 169 |
| Conread position: | 342-613 |
| Cow position: | chr12:37993997-37993700 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 211 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 342-616 |
| Cow position: | chr12:6241038-6241354 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 239 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 342-616 |
| Cow position: | chr12:8943491-8943189 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 26, 41 |
| Conread position: | 342-616 |
| Cow position: | chr12:18572370-18572659 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 211 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 27, 197 |
| Conread position: | 342-616 |
| Cow position: | chr12:19502691-19502393 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 26, 198 |
| Conread position: | 342-616 |
| Cow position: | chr12:29995733-29995429 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 25, 204 |
| Conread position: | 342-616 |
| Cow position: | chr12:30662221-30661915 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 342-616 |
| Cow position: | chr12:42698494-42698211 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 209 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 26, 188 |
| Conread position: | 342-626 |
| Cow position: | chr12:7000863-7000560 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 24, 94 |
| Conread position: | 343-478 |
| Cow position: | chr12:35771302-35771158 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 343-612 |
| Cow position: | chr12:31228304-31228603 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 208 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 344-464 |
| Cow position: | chr12:19872169-19872283 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 24, 53 |
| Conread position: | 344-468 |
| Cow position: | chr12:24032737-24032864 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 344-478 |
| Cow position: | chr12:36501221-36501083 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 22, 116 |
| Conread position: | 344-612 |
| Cow position: | chr12:9229751-9229469 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 344-616 |
| Cow position: | chr12:7977778-7978072 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 24, 59 |
| Conread position: | 345-612 |
| Cow position: | chr12:18943912-18943627 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 210 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 23, 187 |
| Conread position: | 346-593 |
| Cow position: | chr12:34385781-34385499 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 349-583 |
| Cow position: | chr12:24107802-24107550 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 19, 61 |
| Conread position: | 352-451 |
| Cow position: | chr12:20283649-20283751 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 90 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 352-457 |
| Cow position: | chr12:29162072-29161966 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 352-533 |
| Cow position: | chr12:26527117-26527307 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 353-612 |
| Cow position: | chr12:5635708-5635422 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 15, 179 |
| Conread position: | 353-612 |
| Cow position: | chr12:5940083-5940372 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 207 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 13, 183 |
| Conread position: | 354-583 |
| Cow position: | chr12:1343362-1343115 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 356-612 |
| Cow position: | chr12:15240981-15240707 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 197 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 12, 163 |
| Conread position: | 367-567 |
| Cow position: | chr12:20654913-20654716 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 172, 71 |
| Conread position: | 367-612 |
| Cow position: | chr12:24211171-24211438 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 198 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 376-616 |
| Cow position: | chr12:15162914-15163174 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 49, 122 |
| Conread position: | 376-616 |
| Cow position: | chr12:18103830-18103577 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 40, 106 |
| Conread position: | 393-616 |
| Cow position: | chr12:10942094-10942322 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 48, 5 |
| Conread position: | 478-616 |
| Cow position: | chr12:15050726-15050588 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 48, 38 |
| Conread position: | 478-616 |
| Cow position: | chr12:23855728-23855871 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 478-618 |
| Cow position: | chr12:33851249-33851394 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 484-612 |
| Cow position: | chr12:41215987-41215854 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 484-613 |
| Cow position: | chr12:42285865-42286002 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 43, 0 |
Show alignments to all cow chromosomes.