Cow genome map
| Conread name: | Ss1.1-Thy1-THY010070D09.5 |
| Conread position: | 277-610 |
| Cow position: | chr25:21895188-21894820 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 262 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 42, 46 |
| Conread position: | 302-456 |
| Cow position: | chr25:7329271-7329431 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 66, 21 |
| Conread position: | 334-457 |
| Cow position: | chr25:14225039-14224919 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 30, 80 |
| Conread position: | 334-463 |
| Cow position: | chr25:35607967-35607831 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 334-612 |
| Cow position: | chr25:26238627-26238929 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 211 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 13, 166 |
| Conread position: | 334-612 |
| Cow position: | chr25:28188192-28187878 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 33, 235 |
| Conread position: | 334-616 |
| Cow position: | chr25:6474342-6474016 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 230 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 336-457 |
| Cow position: | chr25:16316656-16316778 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 32, 85 |
| Conread position: | 336-459 |
| Cow position: | chr25:13380857-13380726 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 337-455 |
| Cow position: | chr25:15694744-15694864 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 31, 72 |
| Conread position: | 337-493 |
| Cow position: | chr25:18294553-18294399 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 31, 75 |
| Conread position: | 338-432 |
| Cow position: | chr25:8961224-8961319 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 84 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 338-456 |
| Cow position: | chr25:19679103-19679229 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 338-458 |
| Cow position: | chr25:12234997-12234873 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 338-458 |
| Cow position: | chr25:36026768-36026893 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 338-461 |
| Cow position: | chr25:17975606-17975479 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 99 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 338-461 |
| Cow position: | chr25:18988137-18988267 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 30, 122 |
| Conread position: | 338-462 |
| Cow position: | chr25:6464268-6464145 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 30, 68 |
| Conread position: | 338-462 |
| Cow position: | chr25:17566348-17566474 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 338-462 |
| Cow position: | chr25:18075430-18075561 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 30, 22 |
| Conread position: | 338-462 |
| Cow position: | chr25:21289101-21289233 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 338-464 |
| Cow position: | chr25:20348619-20348750 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 338-480 |
| Cow position: | chr25:30035309-30035459 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 338-567 |
| Cow position: | chr25:35625412-35625169 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 192 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 90, 8 |
| Conread position: | 338-583 |
| Cow position: | chr25:21950887-21951161 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 200 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 30, 181 |
| Conread position: | 338-612 |
| Cow position: | chr25:18448598-18448880 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 30, 132 |
| Conread position: | 338-612 |
| Cow position: | chr25:20460883-20461170 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 338-616 |
| Cow position: | chr25:13325362-13325651 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 8, 29 |
| Conread position: | 338-616 |
| Cow position: | chr25:20060270-20059979 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 30, 22 |
| Conread position: | 339-459 |
| Cow position: | chr25:5514768-5514896 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 339-461 |
| Cow position: | chr25:24669669-24669548 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 29, 87 |
| Conread position: | 339-462 |
| Cow position: | chr25:12293989-12293857 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 339-463 |
| Cow position: | chr25:33691315-33691447 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 339-466 |
| Cow position: | chr25:21245845-21245714 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 339-467 |
| Cow position: | chr25:12817134-12817270 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 339-471 |
| Cow position: | chr25:16866993-16867132 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 29, 18 |
| Conread position: | 339-480 |
| Cow position: | chr25:18293518-18293661 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 30, 76 |
| Conread position: | 339-504 |
| Cow position: | chr25:19633856-19633693 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 73, 100 |
| Conread position: | 339-610 |
| Cow position: | chr25:7581666-7581366 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 29, 216 |
| Conread position: | 339-611 |
| Cow position: | chr25:33256130-33256419 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 191 |
| Conread position: | 339-612 |
| Cow position: | chr25:40321531-40321221 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 225 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 339-616 |
| Cow position: | chr25:16064658-16064963 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 223 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 29, 82 |
| Conread position: | 339-616 |
| Cow position: | chr25:17658376-17658682 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 230 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 27, 40 |
| Conread position: | 341-575 |
| Cow position: | chr25:9396214-9396468 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 27, 187 |
| Conread position: | 342-452 |
| Cow position: | chr25:17475759-17475638 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 100 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 342-453 |
| Cow position: | chr25:38569833-38569718 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 26, 50 |
| Conread position: | 342-455 |
| Cow position: | chr25:36119966-36120084 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 342-456 |
| Cow position: | chr25:9842766-9842887 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 24, 37 |
| Conread position: | 342-456 |
| Cow position: | chr25:15319685-15319803 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 342-456 |
| Cow position: | chr25:25051619-25051498 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 342-456 |
| Cow position: | chr25:35347669-35347791 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 342-458 |
| Cow position: | chr25:1096342-1096464 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 342-459 |
| Cow position: | chr25:1838005-1838123 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 24, 17 |
| Conread position: | 342-459 |
| Cow position: | chr25:12824249-12824135 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 24, 72 |
| Conread position: | 342-460 |
| Cow position: | chr25:9642119-9642244 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 342-461 |
| Cow position: | chr25:8576458-8576581 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 342-461 |
| Cow position: | chr25:13720773-13720651 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 24, 42 |
| Conread position: | 342-461 |
| Cow position: | chr25:20023628-20023501 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 342-461 |
| Cow position: | chr25:24405971-24405848 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 342-461 |
| Cow position: | chr25:26087280-26087407 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 342-462 |
| Cow position: | chr25:11666421-11666541 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 26, 70 |
| Conread position: | 342-462 |
| Cow position: | chr25:15286775-15286651 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 342-462 |
| Cow position: | chr25:20402955-20402827 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 342-463 |
| Cow position: | chr25:14791517-14791644 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 342-463 |
| Cow position: | chr25:16001755-16001634 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 26, 82 |
| Conread position: | 342-463 |
| Cow position: | chr25:19129619-19129743 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 26, 18 |
| Conread position: | 342-463 |
| Cow position: | chr25:38135513-38135637 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 26, 75 |
| Conread position: | 342-463 |
| Cow position: | chr25:40957222-40957098 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 24, 43 |
| Conread position: | 342-464 |
| Cow position: | chr25:17712299-17712422 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 342-489 |
| Cow position: | chr25:15368443-15368597 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 342-490 |
| Cow position: | chr25:13566608-13566764 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 342-491 |
| Cow position: | chr25:8347274-8347422 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 26, 72 |
| Conread position: | 342-492 |
| Cow position: | chr25:23410428-23410580 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 26, 116 |
| Conread position: | 342-493 |
| Cow position: | chr25:10012284-10012130 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 25, 126 |
| Conread position: | 342-497 |
| Cow position: | chr25:13642551-13642392 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 26, 117 |
| Conread position: | 342-504 |
| Cow position: | chr25:30319684-30319517 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 342-558 |
| Cow position: | chr25:10137863-10138100 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 342-559 |
| Cow position: | chr25:22549849-22549640 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 26, 74 |
| Conread position: | 342-562 |
| Cow position: | chr25:35344803-35345041 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 26, 223 |
| Conread position: | 342-572 |
| Cow position: | chr25:18935109-18934877 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 24, 127 |
| Conread position: | 342-577 |
| Cow position: | chr25:10156356-10156597 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 26, 188 |
| Conread position: | 342-578 |
| Cow position: | chr25:1735551-1735294 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 26, 173 |
| Conread position: | 342-578 |
| Cow position: | chr25:9023410-9023659 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 80, 179 |
| Conread position: | 342-580 |
| Cow position: | chr25:33260505-33260760 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 342-581 |
| Cow position: | chr25:40407706-40407467 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 28, 65 |
| Conread position: | 342-589 |
| Cow position: | chr25:14266739-14266477 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 342-597 |
| Cow position: | chr25:6003226-6002963 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 26, 129 |
| Conread position: | 342-598 |
| Cow position: | chr25:6891754-6891489 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 26, 79 |
| Conread position: | 342-599 |
| Cow position: | chr25:2194710-2194985 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 191 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 342-609 |
| Cow position: | chr25:14117874-14118155 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 26, 272 |
| Conread position: | 342-609 |
| Cow position: | chr25:24008412-24008133 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 196 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 26, 198 |
| Conread position: | 342-609 |
| Cow position: | chr25:24572839-24573129 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 24, 64 |
| Conread position: | 342-610 |
| Cow position: | chr25:9269136-9269408 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 26, 168 |
| Conread position: | 342-611 |
| Cow position: | chr25:15377098-15377392 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 26, 58 |
| Conread position: | 342-611 |
| Cow position: | chr25:21209183-21208904 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 26, 129 |
| Conread position: | 342-612 |
| Cow position: | chr25:5847041-5846742 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 26, 12 |
| Conread position: | 342-612 |
| Cow position: | chr25:12778767-12778474 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 26, 186 |
| Conread position: | 342-612 |
| Cow position: | chr25:14196621-14196930 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 26, 195 |
| Conread position: | 342-612 |
| Cow position: | chr25:18490837-18491105 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 28, 217 |
| Conread position: | 342-612 |
| Cow position: | chr25:23829352-23829062 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 206 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 86, 61 |
| Conread position: | 342-612 |
| Cow position: | chr25:26700803-26701094 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 50 |
| Conread position: | 342-612 |
| Cow position: | chr25:33550271-33550578 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 24, 12 |
| Conread position: | 342-612 |
| Cow position: | chr25:36761871-36762172 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 223 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 26, 190 |
| Conread position: | 342-612 |
| Cow position: | chr25:37594179-37594473 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 26, 83 |
| Conread position: | 342-613 |
| Cow position: | chr25:61422-61718 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 342-613 |
| Cow position: | chr25:20020222-20019935 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 24, 79 |
| Conread position: | 342-616 |
| Cow position: | chr25:15254566-15254277 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 26, 186 |
| Conread position: | 342-616 |
| Cow position: | chr25:15273455-15273744 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 209 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 24, 10 |
| Conread position: | 342-616 |
| Cow position: | chr25:16400485-16400214 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 26, 57 |
| Conread position: | 342-616 |
| Cow position: | chr25:36037015-36036708 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 342-617 |
| Cow position: | chr25:11437037-11436735 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 26, 84 |
| Conread position: | 343-441 |
| Cow position: | chr25:22730404-22730503 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 84 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 343-454 |
| Cow position: | chr25:433314-433202 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 343-456 |
| Cow position: | chr25:6683295-6683179 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 23, 98 |
| Conread position: | 343-458 |
| Cow position: | chr25:10365986-10365866 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 343-458 |
| Cow position: | chr25:14104060-14104170 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 343-459 |
| Cow position: | chr25:36535669-36535551 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 25, 33 |
| Conread position: | 343-462 |
| Cow position: | chr25:6256172-6256050 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 25, 41 |
| Conread position: | 343-472 |
| Cow position: | chr25:14467319-14467182 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 343-486 |
| Cow position: | chr25:6424822-6424666 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 343-543 |
| Cow position: | chr25:24452403-24452184 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 26, 17 |
| Conread position: | 343-607 |
| Cow position: | chr25:10949790-10949518 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 190 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 25, 71 |
| Conread position: | 343-612 |
| Cow position: | chr25:7216594-7216891 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 25, 240 |
| Conread position: | 343-612 |
| Cow position: | chr25:9349491-9349216 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 25, 92 |
| Conread position: | 344-460 |
| Cow position: | chr25:12204237-12204355 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 344-491 |
| Cow position: | chr25:25827229-25827382 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 25, 127 |
| Conread position: | 344-608 |
| Cow position: | chr25:11585285-11585581 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 224 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 24, 203 |
| Conread position: | 345-616 |
| Cow position: | chr25:16922026-16921726 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 232 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 23, 175 |
| Conread position: | 346-483 |
| Cow position: | chr25:10657255-10657106 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 346-609 |
| Cow position: | chr25:21266775-21267056 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 22, 148 |
| Conread position: | 346-612 |
| Cow position: | chr25:19478456-19478742 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 11, 152 |
| Conread position: | 346-616 |
| Cow position: | chr25:11956594-11956875 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 211 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 20, 131 |
| Conread position: | 347-461 |
| Cow position: | chr25:10218281-10218162 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 349-609 |
| Cow position: | chr25:34169726-34170010 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 352-616 |
| Cow position: | chr25:16319357-16319069 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 16, 170 |
| Conread position: | 354-460 |
| Cow position: | chr25:16389514-16389405 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 354-468 |
| Cow position: | chr25:12239371-12239253 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 354-579 |
| Cow position: | chr25:10330625-10330385 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 13, 127 |
| Conread position: | 354-612 |
| Cow position: | chr25:38957749-38958022 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 14, 34 |
| Conread position: | 360-533 |
| Cow position: | chr25:36513292-36513467 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 7, 98 |
| Conread position: | 368-577 |
| Cow position: | chr25:26270142-26269912 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 369-613 |
| Cow position: | chr25:40905036-40904762 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 370-478 |
| Cow position: | chr25:16714480-16714370 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 91 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 372-610 |
| Cow position: | chr25:17704545-17704809 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 44, 164 |
| Conread position: | 383-612 |
| Cow position: | chr25:14720559-14720811 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 36, 145 |
| Conread position: | 455-612 |
| Cow position: | chr25:8961671-8961837 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 478-612 |
| Cow position: | chr25:6687874-6688012 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 478-616 |
| Cow position: | chr25:5920011-5920152 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 97, 43 |
| Conread position: | 478-616 |
| Cow position: | chr25:17474586-17474442 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 483-616 |
| Cow position: | chr25:26654842-26654978 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 103 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 484-612 |
| Cow position: | chr25:38982036-38982160 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 100, 33 |
| Conread position: | 486-610 |
| Cow position: | chr25:25716586-25716711 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 85, 35 |
| Conread position: | 486-616 |
| Cow position: | chr25:10504403-10504270 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 94, 0 |
Show alignments to all cow chromosomes.