Cow genome map
| Conread name: | Ss1.1-Thy1-THY010070D09.5 |
| Conread position: | 273-462 |
| Cow position: | chr27:27040860-27040673 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 93, 26 |
| Conread position: | 288-471 |
| Cow position: | chr27:27449193-27449377 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 80, 26 |
| Conread position: | 310-461 |
| Cow position: | chr27:8291790-8291936 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 29, 24 |
| Conread position: | 331-612 |
| Cow position: | chr27:4805708-4806014 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 333-460 |
| Cow position: | chr27:21393305-21393434 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 334-456 |
| Cow position: | chr27:31230896-31231022 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 334-459 |
| Cow position: | chr27:264449-264317 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 106 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 334-462 |
| Cow position: | chr27:29831490-29831622 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 34, 18 |
| Conread position: | 334-463 |
| Cow position: | chr27:16620189-16620052 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 334-535 |
| Cow position: | chr27:17926439-17926651 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 34, 92 |
| Conread position: | 334-550 |
| Cow position: | chr27:6058700-6058460 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 34, 210 |
| Conread position: | 334-612 |
| Cow position: | chr27:22603361-22603073 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 213 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 20, 79 |
| Conread position: | 335-466 |
| Cow position: | chr27:68245-68380 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 33, 14 |
| Conread position: | 337-462 |
| Cow position: | chr27:20592177-20592049 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 31, 5 |
| Conread position: | 337-463 |
| Cow position: | chr27:18215250-18215116 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 338-456 |
| Cow position: | chr27:22035180-22035306 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 338-459 |
| Cow position: | chr27:27019907-27020032 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 31, 118 |
| Conread position: | 338-461 |
| Cow position: | chr27:17473006-17472879 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 338-461 |
| Cow position: | chr27:19543716-19543839 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 96 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 30, 88 |
| Conread position: | 338-462 |
| Cow position: | chr27:2011910-2012035 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 338-462 |
| Cow position: | chr27:6500258-6500126 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 338-462 |
| Cow position: | chr27:13638799-13638927 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 338-462 |
| Cow position: | chr27:22771951-22771819 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 338-463 |
| Cow position: | chr27:11815566-11815695 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 338-467 |
| Cow position: | chr27:27055771-27055634 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 338-476 |
| Cow position: | chr27:29038746-29038892 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 338-504 |
| Cow position: | chr27:732764-732597 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 31, 16 |
| Conread position: | 338-534 |
| Cow position: | chr27:28685335-28685136 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 28, 69 |
| Conread position: | 338-537 |
| Cow position: | chr27:23502657-23502457 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 30, 76 |
| Conread position: | 338-580 |
| Cow position: | chr27:11255706-11255451 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 31, 67 |
| Conread position: | 338-583 |
| Cow position: | chr27:28921703-28921969 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 30, 207 |
| Conread position: | 338-609 |
| Cow position: | chr27:15926965-15926685 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 189 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 30, 139 |
| Conread position: | 338-609 |
| Cow position: | chr27:26427935-26428242 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 338-609 |
| Cow position: | chr27:30915195-30914900 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 30, 83 |
| Conread position: | 338-616 |
| Cow position: | chr27:2930403-2930705 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 338-616 |
| Cow position: | chr27:11296451-11296153 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 338-616 |
| Cow position: | chr27:20869507-20869799 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 28, 124 |
| Conread position: | 339-456 |
| Cow position: | chr27:4812684-4812809 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 339-456 |
| Cow position: | chr27:6674429-6674307 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 74, 25 |
| Conread position: | 339-456 |
| Cow position: | chr27:15858898-15859018 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 34, 114 |
| Conread position: | 339-457 |
| Cow position: | chr27:2592734-2592619 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 29, 57 |
| Conread position: | 339-457 |
| Cow position: | chr27:18922643-18922521 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 339-459 |
| Cow position: | chr27:27259801-27259677 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 339-460 |
| Cow position: | chr27:21452877-21453006 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 339-461 |
| Cow position: | chr27:27640799-27640929 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 339-462 |
| Cow position: | chr27:12429601-12429468 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 339-463 |
| Cow position: | chr27:22498746-22498621 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 10, 83 |
| Conread position: | 339-463 |
| Cow position: | chr27:26398066-26398195 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 339-464 |
| Cow position: | chr27:6037315-6037188 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 339-464 |
| Cow position: | chr27:15866416-15866287 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 339-480 |
| Cow position: | chr27:28276465-28276319 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 65, 133 |
| Conread position: | 339-507 |
| Cow position: | chr27:19577867-19577693 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 32, 149 |
| Conread position: | 339-567 |
| Cow position: | chr27:27141785-27141541 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 184 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 30, 10 |
| Conread position: | 339-576 |
| Cow position: | chr27:27558337-27558573 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 29, 67 |
| Conread position: | 339-578 |
| Cow position: | chr27:23070167-23070431 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 29, 211 |
| Conread position: | 339-590 |
| Cow position: | chr27:13198109-13197821 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 339-607 |
| Cow position: | chr27:25277329-25277035 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 227 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 29, 67 |
| Conread position: | 339-608 |
| Cow position: | chr27:28518478-28518187 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 221 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 29, 84 |
| Conread position: | 339-612 |
| Cow position: | chr27:6074109-6073819 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 202 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 29, 85 |
| Conread position: | 339-612 |
| Cow position: | chr27:24014548-24014852 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 29, 191 |
| Conread position: | 339-613 |
| Cow position: | chr27:25783795-25783512 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 210 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 29, 151 |
| Conread position: | 339-616 |
| Cow position: | chr27:25809330-25809632 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 218 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 30, 206 |
| Conread position: | 340-477 |
| Cow position: | chr27:18439095-18438953 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 340-573 |
| Cow position: | chr27:31147482-31147736 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 28, 66 |
| Conread position: | 340-578 |
| Cow position: | chr27:22440331-22440070 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 28, 193 |
| Conread position: | 340-583 |
| Cow position: | chr27:31372788-31373060 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 340-612 |
| Cow position: | chr27:18593462-18593160 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 28, 195 |
| Conread position: | 340-616 |
| Cow position: | chr27:28206989-28206685 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 217 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 28, 176 |
| Conread position: | 342-453 |
| Cow position: | chr27:22293523-22293636 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 342-455 |
| Cow position: | chr27:22418575-22418695 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 100 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 24, 110 |
| Conread position: | 342-456 |
| Cow position: | chr27:19685525-19685640 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 342-456 |
| Cow position: | chr27:23483412-23483296 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 26, 65 |
| Conread position: | 342-456 |
| Cow position: | chr27:25411330-25411446 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 26, 75 |
| Conread position: | 342-456 |
| Cow position: | chr27:26151209-26151092 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 342-456 |
| Cow position: | chr27:30551185-30551068 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 26, 79 |
| Conread position: | 342-457 |
| Cow position: | chr27:26625314-26625196 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 342-459 |
| Cow position: | chr27:6523235-6523111 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 342-459 |
| Cow position: | chr27:28001629-28001741 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 100 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 24, 32 |
| Conread position: | 342-459 |
| Cow position: | chr27:30582927-30582808 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 342-459 |
| Cow position: | chr27:30765221-30765106 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 95 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 26, 79 |
| Conread position: | 342-461 |
| Cow position: | chr27:4664659-4664538 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 342-461 |
| Cow position: | chr27:12516388-12516261 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 342-461 |
| Cow position: | chr27:13847828-13847705 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 342-461 |
| Cow position: | chr27:18739577-18739454 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 342-461 |
| Cow position: | chr27:24331915-24331791 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 342-461 |
| Cow position: | chr27:27632420-27632544 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 342-461 |
| Cow position: | chr27:28931598-28931725 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 342-462 |
| Cow position: | chr27:4385877-4385996 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 26, 91 |
| Conread position: | 342-462 |
| Cow position: | chr27:11081385-11081262 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 342-463 |
| Cow position: | chr27:25380180-25380057 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 342-463 |
| Cow position: | chr27:29400007-29399879 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 26, 10 |
| Conread position: | 342-464 |
| Cow position: | chr27:22426638-22426766 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 342-464 |
| Cow position: | chr27:26406851-26406981 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 342-465 |
| Cow position: | chr27:10307106-10307236 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 342-472 |
| Cow position: | chr27:12282678-12282810 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 24, 115 |
| Conread position: | 342-478 |
| Cow position: | chr27:9978016-9977873 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 342-480 |
| Cow position: | chr27:30670927-30670781 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 342-491 |
| Cow position: | chr27:23554130-23554289 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 342-493 |
| Cow position: | chr27:783919-783764 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 24, 144 |
| Conread position: | 342-516 |
| Cow position: | chr27:6292560-6292387 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 24, 82 |
| Conread position: | 342-519 |
| Cow position: | chr27:30185481-30185295 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 342-522 |
| Cow position: | chr27:21418877-21419071 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 24, 160 |
| Conread position: | 342-522 |
| Cow position: | chr27:22220743-22220554 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 26, 155 |
| Conread position: | 342-530 |
| Cow position: | chr27:26239213-26239019 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 86, 180 |
| Conread position: | 342-537 |
| Cow position: | chr27:1884227-1884019 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 23, 194 |
| Conread position: | 342-540 |
| Cow position: | chr27:21578413-21578619 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 24, 184 |
| Conread position: | 342-572 |
| Cow position: | chr27:14902459-14902719 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 26, 107 |
| Conread position: | 342-577 |
| Cow position: | chr27:16823003-16822765 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 25, 161 |
| Conread position: | 342-584 |
| Cow position: | chr27:4962271-4962518 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 25, 118 |
| Conread position: | 342-606 |
| Cow position: | chr27:26935730-26936003 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 24, 125 |
| Conread position: | 342-607 |
| Cow position: | chr27:20036939-20037224 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 218 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 26, 70 |
| Conread position: | 342-607 |
| Cow position: | chr27:20553906-20553624 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 202 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 24, 226 |
| Conread position: | 342-608 |
| Cow position: | chr27:22171487-22171191 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 215 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 26, 10 |
| Conread position: | 342-608 |
| Cow position: | chr27:28190028-28190310 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 26, 188 |
| Conread position: | 342-609 |
| Cow position: | chr27:20354769-20354487 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 206 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 26, 62 |
| Conread position: | 342-610 |
| Cow position: | chr27:20629221-20628958 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 26, 54 |
| Conread position: | 342-611 |
| Cow position: | chr27:9090612-9090902 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 27, 101 |
| Conread position: | 342-611 |
| Cow position: | chr27:22179608-22179878 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 189 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 24, 113 |
| Conread position: | 342-611 |
| Cow position: | chr27:30362432-30362142 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 220 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 70, 203 |
| Conread position: | 342-612 |
| Cow position: | chr27:299194-299493 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 26, 193 |
| Conread position: | 342-612 |
| Cow position: | chr27:1768446-1768736 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 26, 36 |
| Conread position: | 342-612 |
| Cow position: | chr27:12596948-12596664 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 205 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 26, 42 |
| Conread position: | 342-612 |
| Cow position: | chr27:16705436-16705138 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 26, 203 |
| Conread position: | 342-612 |
| Cow position: | chr27:17646009-17646281 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 26, 56 |
| Conread position: | 342-612 |
| Cow position: | chr27:23472445-23472146 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 26, 191 |
| Conread position: | 342-612 |
| Cow position: | chr27:24445967-24446259 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 26, 266 |
| Conread position: | 342-612 |
| Cow position: | chr27:29019559-29019846 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 24, 161 |
| Conread position: | 342-616 |
| Cow position: | chr27:6550640-6550347 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 26, 90 |
| Conread position: | 342-616 |
| Cow position: | chr27:8062167-8062467 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 204 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 26, 155 |
| Conread position: | 342-616 |
| Cow position: | chr27:15315683-15315402 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 27, 106 |
| Conread position: | 342-616 |
| Cow position: | chr27:18507821-18507533 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 209 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 26, 175 |
| Conread position: | 342-616 |
| Cow position: | chr27:29515672-29515962 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 26, 12 |
| Conread position: | 342-616 |
| Cow position: | chr27:30868550-30868857 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 229 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 26, 10 |
| Conread position: | 342-617 |
| Cow position: | chr27:1058490-1058795 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 343-450 |
| Cow position: | chr27:10275507-10275611 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 25, 63 |
| Conread position: | 343-456 |
| Cow position: | chr27:16871727-16871842 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 343-457 |
| Cow position: | chr27:29283220-29283338 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 343-464 |
| Cow position: | chr27:24227605-24227729 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 25, 100 |
| Conread position: | 343-491 |
| Cow position: | chr27:24027160-24027015 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 25, 98 |
| Conread position: | 343-609 |
| Cow position: | chr27:26508969-26509264 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 70, 160 |
| Conread position: | 343-612 |
| Cow position: | chr27:22547216-22547508 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 200 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 24, 285 |
| Conread position: | 343-616 |
| Cow position: | chr27:30354155-30354461 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 23, 209 |
| Conread position: | 344-459 |
| Cow position: | chr27:26218886-26218775 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 24, 50 |
| Conread position: | 344-461 |
| Cow position: | chr27:1183689-1183811 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 22, 38 |
| Conread position: | 344-612 |
| Cow position: | chr27:22454593-22454888 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 24, 80 |
| Conread position: | 344-617 |
| Cow position: | chr27:22723519-22723811 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 24, 189 |
| Conread position: | 345-616 |
| Cow position: | chr27:10992540-10992240 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 23, 199 |
| Conread position: | 346-456 |
| Cow position: | chr27:19718109-19717993 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 346-609 |
| Cow position: | chr27:1636756-1637045 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 22, 190 |
| Conread position: | 347-612 |
| Cow position: | chr27:15454396-15454098 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 352-610 |
| Cow position: | chr27:12278093-12278363 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 16, 78 |
| Conread position: | 352-612 |
| Cow position: | chr27:4067-3784 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 16, 95 |
| Conread position: | 353-471 |
| Cow position: | chr27:27550569-27550690 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 98 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 357-471 |
| Cow position: | chr27:9169470-9169588 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 367-582 |
| Cow position: | chr27:1290701-1290927 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 101, 140 |
| Conread position: | 383-612 |
| Cow position: | chr27:4858502-4858752 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 45, 14 |
| Conread position: | 458-610 |
| Cow position: | chr27:9169599-9169751 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 126, 20 |
| Conread position: | 477-612 |
| Cow position: | chr27:17918287-17918426 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 103, 41 |
| Conread position: | 478-610 |
| Cow position: | chr27:22418740-22418877 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 478-612 |
| Cow position: | chr27:23890966-23890825 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 43, 47 |
| Conread position: | 478-613 |
| Cow position: | chr27:29593601-29593742 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 46, 37 |
| Conread position: | 484-612 |
| Cow position: | chr27:25152103-25151976 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 95, 26 |
| Conread position: | 484-616 |
| Cow position: | chr27:20514842-20514706 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 39, 0 |
Show alignments to all cow chromosomes.