Cow genome map
| Conread name: | Ss1.1-Thy1-THY010070D09.5 |
| Conread position: | 286-504 |
| Cow position: | chr28:23459856-23460085 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 161 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 37, 190 |
| Conread position: | 288-504 |
| Cow position: | chr28:30293869-30293652 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 20, 44 |
| Conread position: | 288-612 |
| Cow position: | chr28:10642298-10641960 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 20, 44 |
| Conread position: | 288-616 |
| Cow position: | chr28:18354598-18354255 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 252 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 78, 20 |
| Conread position: | 334-459 |
| Cow position: | chr28:7590418-7590288 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 334-491 |
| Cow position: | chr28:26743386-26743544 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 34, 131 |
| Conread position: | 334-612 |
| Cow position: | chr28:26719124-26719417 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 215 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 15, 56 |
| Conread position: | 336-612 |
| Cow position: | chr28:8408505-8408808 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 227 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 10, 44 |
| Conread position: | 336-616 |
| Cow position: | chr28:5144757-5144443 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 10, 209 |
| Conread position: | 338-456 |
| Cow position: | chr28:23775814-23775940 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 338-461 |
| Cow position: | chr28:25498735-25498604 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 338-462 |
| Cow position: | chr28:14151003-14151131 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 338-462 |
| Cow position: | chr28:22485017-22485142 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 30, 22 |
| Conread position: | 338-463 |
| Cow position: | chr28:20760155-20760022 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 338-491 |
| Cow position: | chr28:32813230-32813073 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 30, 38 |
| Conread position: | 338-574 |
| Cow position: | chr28:18717354-18717101 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 338-611 |
| Cow position: | chr28:3024143-3023840 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 216 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 338-612 |
| Cow position: | chr28:10977633-10977916 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 202 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 30, 115 |
| Conread position: | 338-616 |
| Cow position: | chr28:15272492-15272195 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 30, 160 |
| Conread position: | 338-616 |
| Cow position: | chr28:16109713-16110015 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 30, 178 |
| Conread position: | 338-616 |
| Cow position: | chr28:21363527-21363818 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 91, 28 |
| Conread position: | 339-450 |
| Cow position: | chr28:3751088-3751202 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 27, 72 |
| Conread position: | 339-454 |
| Cow position: | chr28:13356816-13356701 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 98 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 29, 67 |
| Conread position: | 339-456 |
| Cow position: | chr28:4070738-4070860 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 339-456 |
| Cow position: | chr28:5658323-5658443 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 29, 65 |
| Conread position: | 339-456 |
| Cow position: | chr28:16346757-16346636 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 339-456 |
| Cow position: | chr28:16370305-16370185 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 96 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 339-457 |
| Cow position: | chr28:15688810-15688931 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 95 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 339-458 |
| Cow position: | chr28:3077762-3077882 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 339-459 |
| Cow position: | chr28:16450926-16450810 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 339-461 |
| Cow position: | chr28:3493015-3492889 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 29, 69 |
| Conread position: | 339-461 |
| Cow position: | chr28:21868221-21868351 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 339-463 |
| Cow position: | chr28:17029946-17029820 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 339-467 |
| Cow position: | chr28:15601033-15601163 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 32, 13 |
| Conread position: | 339-476 |
| Cow position: | chr28:16475764-16475904 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 28, 10 |
| Conread position: | 339-557 |
| Cow position: | chr28:19222828-19222590 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 29, 175 |
| Conread position: | 339-583 |
| Cow position: | chr28:14933731-14933996 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 186 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 339-612 |
| Cow position: | chr28:6971570-6971274 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 211 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 29, 82 |
| Conread position: | 339-612 |
| Cow position: | chr28:7684908-7684630 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 216 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 86, 189 |
| Conread position: | 339-612 |
| Cow position: | chr28:11786939-11786643 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 27, 82 |
| Conread position: | 339-612 |
| Cow position: | chr28:21502164-21502466 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 29, 201 |
| Conread position: | 339-612 |
| Cow position: | chr28:21844725-21845031 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 29, 194 |
| Conread position: | 339-612 |
| Cow position: | chr28:23793532-23793235 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 30, 13 |
| Conread position: | 339-612 |
| Cow position: | chr28:25399659-25399943 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 194 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 29, 183 |
| Conread position: | 339-612 |
| Cow position: | chr28:26922595-26922294 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 219 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 27, 104 |
| Conread position: | 339-616 |
| Cow position: | chr28:23675913-23676216 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 226 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 29, 64 |
| Conread position: | 339-616 |
| Cow position: | chr28:25282975-25283272 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 29, 9 |
| Conread position: | 340-458 |
| Cow position: | chr28:18934226-18934348 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 340-510 |
| Cow position: | chr28:31415657-31415476 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 340-614 |
| Cow position: | chr28:14234742-14235030 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 9, 194 |
| Conread position: | 342-427 |
| Cow position: | chr28:16925438-16925352 (view UCSC Genome Browser custom track) |
| Alignm length: | 87 |
| Alignm identity: | 77 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 342-454 |
| Cow position: | chr28:2819531-2819649 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 342-455 |
| Cow position: | chr28:2279892-2279774 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 98 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 342-455 |
| Cow position: | chr28:10172641-10172520 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 98 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 342-456 |
| Cow position: | chr28:2905353-2905471 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 342-456 |
| Cow position: | chr28:3914482-3914602 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 98 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 342-456 |
| Cow position: | chr28:9285605-9285483 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 342-456 |
| Cow position: | chr28:11585435-11585314 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 99 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 342-456 |
| Cow position: | chr28:11752372-11752250 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 342-456 |
| Cow position: | chr28:16879495-16879383 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 85, 24 |
| Conread position: | 342-456 |
| Cow position: | chr28:20124558-20124674 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 96 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 26, 70 |
| Conread position: | 342-456 |
| Cow position: | chr28:22345792-22345910 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 95 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 342-457 |
| Cow position: | chr28:16253085-16252969 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 342-458 |
| Cow position: | chr28:23621320-23621440 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 96 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 342-459 |
| Cow position: | chr28:10888436-10888561 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 101 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 342-459 |
| Cow position: | chr28:13242051-13241935 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 23, 98 |
| Conread position: | 342-459 |
| Cow position: | chr28:14555294-14555412 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 86, 23 |
| Conread position: | 342-460 |
| Cow position: | chr28:13371395-13371279 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 26, 14 |
| Conread position: | 342-460 |
| Cow position: | chr28:22170945-22170823 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 342-460 |
| Cow position: | chr28:34844477-34844365 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 97 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 26, 80 |
| Conread position: | 342-461 |
| Cow position: | chr28:8372243-8372370 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 342-461 |
| Cow position: | chr28:31110232-31110110 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 26, 10 |
| Conread position: | 342-462 |
| Cow position: | chr28:4914329-4914201 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 342-462 |
| Cow position: | chr28:10682045-10681925 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 26, 34 |
| Conread position: | 342-462 |
| Cow position: | chr28:11827266-11827387 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 26, 91 |
| Conread position: | 342-462 |
| Cow position: | chr28:29953075-29952950 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 342-463 |
| Cow position: | chr28:7372478-7372353 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 342-463 |
| Cow position: | chr28:19026230-19026114 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 26, 55 |
| Conread position: | 342-464 |
| Cow position: | chr28:10456749-10456625 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 342-464 |
| Cow position: | chr28:19564819-19564692 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 342-464 |
| Cow position: | chr28:21104074-21103946 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 342-464 |
| Cow position: | chr28:26269104-26269228 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 29, 88 |
| Conread position: | 342-467 |
| Cow position: | chr28:2862634-2862767 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 342-467 |
| Cow position: | chr28:23231294-23231165 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 73, 94 |
| Conread position: | 342-468 |
| Cow position: | chr28:11380270-11380135 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 342-472 |
| Cow position: | chr28:3144119-3143985 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 342-476 |
| Cow position: | chr28:10295962-10296102 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 26, 135 |
| Conread position: | 342-491 |
| Cow position: | chr28:20313048-20313196 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 26, 33 |
| Conread position: | 342-493 |
| Cow position: | chr28:25563849-25564006 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 24, 120 |
| Conread position: | 342-498 |
| Cow position: | chr28:8348880-8348722 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 26, 129 |
| Conread position: | 342-533 |
| Cow position: | chr28:16441160-16441358 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 24, 38 |
| Conread position: | 342-550 |
| Cow position: | chr28:9390592-9390358 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 26, 200 |
| Conread position: | 342-564 |
| Cow position: | chr28:24646313-24646558 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 26, 206 |
| Conread position: | 342-565 |
| Cow position: | chr28:5366357-5366127 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 26, 15 |
| Conread position: | 342-567 |
| Cow position: | chr28:5773412-5773658 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 184 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 26, 202 |
| Conread position: | 342-578 |
| Cow position: | chr28:16085097-16085358 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 194 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 27, 65 |
| Conread position: | 342-580 |
| Cow position: | chr28:13936189-13936433 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 25, 132 |
| Conread position: | 342-583 |
| Cow position: | chr28:4841624-4841355 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 192 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 342-583 |
| Cow position: | chr28:14657473-14657735 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 28, 172 |
| Conread position: | 342-583 |
| Cow position: | chr28:17287997-17288254 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 27, 103 |
| Conread position: | 342-584 |
| Cow position: | chr28:16686805-16687066 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 24, 208 |
| Conread position: | 342-600 |
| Cow position: | chr28:7751528-7751239 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 342-603 |
| Cow position: | chr28:4938611-4938874 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 26, 70 |
| Conread position: | 342-607 |
| Cow position: | chr28:19080075-19079776 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 24, 194 |
| Conread position: | 342-610 |
| Cow position: | chr28:16204561-16204262 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 8, 162 |
| Conread position: | 342-610 |
| Cow position: | chr28:26103488-26103774 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 26, 84 |
| Conread position: | 342-612 |
| Cow position: | chr28:1099869-1099590 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 26, 129 |
| Conread position: | 342-612 |
| Cow position: | chr28:3078905-3078608 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 26, 201 |
| Conread position: | 342-612 |
| Cow position: | chr28:4282719-4282417 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 26, 190 |
| Conread position: | 342-612 |
| Cow position: | chr28:5931126-5931426 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 24, 210 |
| Conread position: | 342-612 |
| Cow position: | chr28:11423031-11422742 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 342-612 |
| Cow position: | chr28:11426772-11426467 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 217 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 26, 7 |
| Conread position: | 342-612 |
| Cow position: | chr28:13176906-13176615 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 217 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 26, 259 |
| Conread position: | 342-612 |
| Cow position: | chr28:14649121-14649416 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 27, 191 |
| Conread position: | 342-612 |
| Cow position: | chr28:18591043-18591344 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 342-612 |
| Cow position: | chr28:20412439-20412693 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 24, 75 |
| Conread position: | 342-612 |
| Cow position: | chr28:22500710-22500426 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 24, 41 |
| Conread position: | 342-612 |
| Cow position: | chr28:24996815-24996539 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 201 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 57, 138 |
| Conread position: | 342-612 |
| Cow position: | chr28:25596405-25596702 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 342-613 |
| Cow position: | chr28:5771142-5771441 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 26, 199 |
| Conread position: | 342-613 |
| Cow position: | chr28:9099707-9100008 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 222 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 24, 102 |
| Conread position: | 342-616 |
| Cow position: | chr28:5817620-5817920 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 216 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 119, 88 |
| Conread position: | 342-616 |
| Cow position: | chr28:11451694-11451414 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 26, 119 |
| Conread position: | 342-616 |
| Cow position: | chr28:13267554-13267867 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 342-616 |
| Cow position: | chr28:34230002-34230306 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 211 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 26, 172 |
| Conread position: | 343-457 |
| Cow position: | chr28:16243985-16243867 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 95 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 343-464 |
| Cow position: | chr28:3480043-3480168 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 343-491 |
| Cow position: | chr28:17316632-17316794 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 343-513 |
| Cow position: | chr28:18139208-18139040 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 84, 13 |
| Conread position: | 343-513 |
| Cow position: | chr28:22583402-22583576 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 24, 118 |
| Conread position: | 343-577 |
| Cow position: | chr28:7882575-7882818 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 25, 157 |
| Conread position: | 343-612 |
| Cow position: | chr28:2898769-2899063 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 25, 127 |
| Conread position: | 343-612 |
| Cow position: | chr28:7268162-7267872 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 25, 33 |
| Conread position: | 343-612 |
| Cow position: | chr28:8347508-8347805 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 25, 81 |
| Conread position: | 343-617 |
| Cow position: | chr28:661895-662185 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 214 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 25, 9 |
| Conread position: | 343-617 |
| Cow position: | chr28:25727151-25727451 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 344-456 |
| Cow position: | chr28:8629002-8628886 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 344-612 |
| Cow position: | chr28:23007951-23007656 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 24, 202 |
| Conread position: | 344-616 |
| Cow position: | chr28:10529708-10529412 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 215 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 24, 88 |
| Conread position: | 345-459 |
| Cow position: | chr28:12430385-12430501 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 346-459 |
| Cow position: | chr28:26784690-26784573 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 346-459 |
| Cow position: | chr28:30303418-30303300 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 346-547 |
| Cow position: | chr28:25701084-25700869 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 113, 85 |
| Conread position: | 349-459 |
| Cow position: | chr28:5188622-5188511 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 352-455 |
| Cow position: | chr28:2738029-2737918 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 94 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 353-456 |
| Cow position: | chr28:7980635-7980524 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 95 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 353-609 |
| Cow position: | chr28:26614672-26614944 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 15, 28 |
| Conread position: | 356-491 |
| Cow position: | chr28:23027851-23027992 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 361-612 |
| Cow position: | chr28:4098638-4098904 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 11, 39 |
| Conread position: | 370-603 |
| Cow position: | chr28:10844920-10845172 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 177 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 54, 142 |
| Conread position: | 382-612 |
| Cow position: | chr28:11829129-11828888 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 28, 90 |
| Conread position: | 398-583 |
| Cow position: | chr28:9928450-9928253 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 62, 5 |
| Conread position: | 449-612 |
| Cow position: | chr28:1837902-1838059 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 453-610 |
| Cow position: | chr28:4045763-4045916 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 125, 25 |
| Conread position: | 458-616 |
| Cow position: | chr28:7698064-7697904 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 57, 28 |
| Conread position: | 459-616 |
| Cow position: | chr28:7388852-7388694 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 18, 63 |
| Conread position: | 475-612 |
| Cow position: | chr28:26743556-26743700 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 476-612 |
| Cow position: | chr28:25806505-25806647 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 101, 45 |
| Conread position: | 478-612 |
| Cow position: | chr28:19564297-19564154 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 38, 49 |
| Conread position: | 478-612 |
| Cow position: | chr28:27161393-27161253 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 99, 133 |
| Conread position: | 478-616 |
| Cow position: | chr28:23410390-23410245 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 84, 38 |
| Conread position: | 481-612 |
| Cow position: | chr28:4873411-4873271 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 484-607 |
| Cow position: | chr28:20759761-20759632 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 96, 32 |
Show alignments to all cow chromosomes.